Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J24
(513 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 266 6e-72
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 263 6e-71
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 263 6e-71
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 261 2e-70
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 261 2e-70
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 261 2e-70
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 260 5e-70
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 259 9e-70
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 258 1e-69
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 135 2e-32
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 135 2e-32
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 133 8e-32
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 132 2e-31
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 132 2e-31
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 129 9e-31
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 129 9e-31
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 110 5e-25
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 110 6e-25
At4g37190.1 68417.m05265 expressed protein 34 0.065
At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)... 31 0.46
At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)... 31 0.46
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 1.4
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 3.2
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 5.6
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 27 5.6
At5g54570.1 68418.m06793 glycosyl hydrolase family 1 protein con... 27 7.4
At4g26870.1 68417.m03867 aspartyl-tRNA synthetase, putative / as... 27 7.4
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 7.4
At3g50660.1 68416.m05541 steroid 22-alpha-hydroxylase (CYP90B1) ... 27 7.4
At3g19570.2 68416.m02482 expressed protein contains Pfam domain,... 27 7.4
At3g19570.1 68416.m02481 expressed protein contains Pfam domain,... 27 7.4
At2g38800.1 68415.m04764 calmodulin-binding protein-related cont... 27 7.4
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 7.4
At2g28860.1 68415.m03508 cytochrome P450 family protein similar ... 27 7.4
At1g20400.1 68414.m02544 myosin heavy chain-related 27 7.4
At5g58930.1 68418.m07382 expressed protein contains Pfam PF05340... 27 9.8
At2g34110.1 68415.m04176 hypothetical protein 27 9.8
At1g27595.1 68414.m03365 expressed protein similar to Symplekin ... 27 9.8
At1g10140.1 68414.m01143 expressed protein similar to EST gb|AA5... 27 9.8
At1g08320.1 68414.m00920 bZIP family transcription factor contai... 27 9.8
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 266 bits (652), Expect = 6e-72
Identities = 115/133 (86%), Positives = 129/133 (96%), Gaps = 1/133 (0%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 221
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 222 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 401
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 402 VRKEAESCDCLQG 440
VRKEAE+CDCLQG
Sbjct: 121 VRKEAENCDCLQG 133
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 263 bits (644), Expect = 6e-71
Identities = 114/132 (86%), Positives = 127/132 (96%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 405 RKEAESCDCLQG 440
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 263 bits (644), Expect = 6e-71
Identities = 116/133 (87%), Positives = 127/133 (95%), Gaps = 1/133 (0%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 221
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 222 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 401
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 402 VRKEAESCDCLQG 440
VRKEAE+CDCLQG
Sbjct: 121 VRKEAENCDCLQG 133
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 261 bits (640), Expect = 2e-70
Identities = 116/132 (87%), Positives = 125/132 (94%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 405 RKEAESCDCLQG 440
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 261 bits (639), Expect = 2e-70
Identities = 114/132 (86%), Positives = 125/132 (94%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 405 RKEAESCDCLQG 440
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 261 bits (639), Expect = 2e-70
Identities = 114/132 (86%), Positives = 125/132 (94%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 405 RKEAESCDCLQG 440
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 260 bits (636), Expect = 5e-70
Identities = 116/132 (87%), Positives = 125/132 (94%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 405 RKEAESCDCLQG 440
RKEAE+ DCLQG
Sbjct: 121 RKEAENSDCLQG 132
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 259 bits (634), Expect = 9e-70
Identities = 113/132 (85%), Positives = 126/132 (95%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 405 RKEAESCDCLQG 440
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 258 bits (633), Expect = 1e-69
Identities = 112/132 (84%), Positives = 125/132 (94%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 405 RKEAESCDCLQG 440
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 135 bits (326), Expect = 2e-32
Identities = 62/134 (46%), Positives = 86/134 (64%), Gaps = 2/134 (1%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 218
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 219 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 398
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 399 VVRKEAESCDCLQG 440
VRK A++C LQG
Sbjct: 121 RVRKLADNCTGLQG 134
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 135 bits (326), Expect = 2e-32
Identities = 62/134 (46%), Positives = 86/134 (64%), Gaps = 2/134 (1%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 218
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 219 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 398
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 399 VVRKEAESCDCLQG 440
VRK A++C LQG
Sbjct: 121 RVRKLADNCTGLQG 134
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 133 bits (321), Expect = 8e-32
Identities = 60/134 (44%), Positives = 87/134 (64%), Gaps = 2/134 (1%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 218
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 219 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 398
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 399 VVRKEAESCDCLQG 440
+RK A++C LQG
Sbjct: 121 RLRKLADNCTGLQG 134
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 132 bits (318), Expect = 2e-31
Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 218
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 219 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 398
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 399 VVRKEAESCDCLQG 440
+RK A++C LQG
Sbjct: 121 RIRKLADNCTGLQG 134
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 132 bits (318), Expect = 2e-31
Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 218
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 219 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 398
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 399 VVRKEAESCDCLQG 440
+RK A++C LQG
Sbjct: 121 RIRKLADNCTGLQG 134
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 129 bits (312), Expect = 9e-31
Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 218
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 219 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 398
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 399 VVRKEAESCDCLQG 440
+RK A++C LQG
Sbjct: 121 RIRKLADNCTGLQG 134
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 129 bits (312), Expect = 9e-31
Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 218
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 219 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 398
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 399 VVRKEAESCDCLQG 440
+RK A++C LQG
Sbjct: 121 RIRKLADNCTGLQG 134
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 110 bits (265), Expect = 5e-25
Identities = 49/133 (36%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Frame = +3
Query: 48 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 227
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 228 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 401
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 402 VRKEAESCDCLQG 440
+ +EA+ D L+G
Sbjct: 122 IDREADGSDSLEG 134
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 110 bits (264), Expect = 6e-25
Identities = 49/133 (36%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Frame = +3
Query: 48 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 227
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 228 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 401
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 402 VRKEAESCDCLQG 440
+ +EA+ D L+G
Sbjct: 122 IDREADGSDSLEG 134
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.9 bits (74), Expect = 0.065
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 212
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 213 GKYVPRAILVDLEP--GTMDS 269
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 31.1 bits (67), Expect = 0.46
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -2
Query: 350 GPVVTGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 183
GP TG G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 182 ALQLQVRVPMVSTG 141
+LQLQV++ +++G
Sbjct: 391 SLQLQVQIMSMASG 404
>At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 31.1 bits (67), Expect = 0.46
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -2
Query: 350 GPVVTGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 183
GP TG G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 182 ALQLQVRVPMVSTG 141
+LQLQV++ +++G
Sbjct: 391 SLQLQVQIMSMASG 404
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +3
Query: 378 LVDSVLDVVRKEAESCDCLQ 437
+++SV VVRKEAE+C+CLQ
Sbjct: 1 MINSV-GVVRKEAENCNCLQ 19
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -2
Query: 215 AAGGFIVVYIDALQLQVRVPMVSTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 36
AAGGF + I + + ++ VP + G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 51 EIVHIQAGQCGNQIGAKFWEIISD 122
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 27.5 bits (58), Expect = 5.6
Identities = 37/140 (26%), Positives = 54/140 (38%), Gaps = 9/140 (6%)
Frame = -3
Query: 478 NRCRRRASVSVGXP-WRQSHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSG 302
N R +++ S G R DSA+ ++S ++ S+ S + PAP P L
Sbjct: 85 NSVRSQSNSSSGNNNLRPRSDSATTSSSSHSQPLLSSSSS----SATSPAPTSPANVLPT 140
Query: 301 RKICPKG--------PERTESMVPGSKSTRMARGTYLPPEASL*YTLMRSNCKSESPW*A 146
ICP G R+ S V GS + G+ + + S SP
Sbjct: 141 GNICPSGKIQITGMTQSRSRSDVLGSGTGTYGHGSIMRGGGISPAKPTNTGGGSNSP--V 198
Query: 145 PVGSMPCSSEMISQNLAPIW 86
VGS SS ++ PIW
Sbjct: 199 NVGSSSRSSSTVATGETPIW 218
>At5g54570.1 68418.m06793 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to amygdalin hydrolase isoform AH I precursor
(GI:16757966) [Prunus serotina]
Length = 535
Score = 27.1 bits (57), Expect = 7.4
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 440
+D V S + PD FVFG + + + +G EG + +S+ D KE L
Sbjct: 22 LDHVSSESISRANFPDGFVFGTASSAYQF-EGAVKEGNK-GESIWDTFTKEKPG-KILDF 78
Query: 441 IPTDTLARRRHRF 479
DT + HRF
Sbjct: 79 SNADTTVDQYHRF 91
>At4g26870.1 68417.m03867 aspartyl-tRNA synthetase, putative /
aspartate--tRNA ligase, putative simialr to
aspartate-tRNA ligase (EC 6.1.1.12) from Drosophila
melanogaster GI:4512034, Homo sapiens SP|P14868, Rattus
norvegicus SP|P15178; contains Pfam profile PF00152 tRNA
synthetases class II (D, K and N)
Length = 532
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 396 DVVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPH 500
+++ K A C GI T++ FRYG PPH
Sbjct: 467 ELLEKRAREC----GIDVKTISTYIDAFRYGAPPH 497
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3
Query: 93 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 242
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At3g50660.1 68416.m05541 steroid 22-alpha-hydroxylase (CYP90B1)
(DWF4) identical to gi:2935342
Length = 513
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2
Query: 320 EDEVVRTEDLSERSRADRVHGAGLQVDEDGAGHVL 216
E+E V+TED +E S++D V + D+D G VL
Sbjct: 259 EEEEVKTEDEAEMSKSDHVRKQ--RTDDDLLGWVL 291
>At3g19570.2 68416.m02482 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 27.1 bits (57), Expect = 7.4
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = -3
Query: 496 GGCPYRNRCRRRASVSVGXPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPK 317
GG R R + P SH + + TT+ + STSS+ SV ++ P+P +
Sbjct: 35 GGLQRRPRAAKNVPSRYLSP-SPSHSTTTTTTTATSTSTSSSSSVILRSSKRYPSPLLSR 93
Query: 316 TKLSGRKI--CPKG-PERTESM 260
T S + P P+R++S+
Sbjct: 94 TTNSASNLVYTPSSLPKRSQSV 115
>At3g19570.1 68416.m02481 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 627
Score = 27.1 bits (57), Expect = 7.4
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = -3
Query: 496 GGCPYRNRCRRRASVSVGXPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPK 317
GG R R + P SH + + TT+ + STSS+ SV ++ P+P +
Sbjct: 35 GGLQRRPRAAKNVPSRYLSP-SPSHSTTTTTTTATSTSTSSSSSVILRSSKRYPSPLLSR 93
Query: 316 TKLSGRKI--CPKG-PERTESM 260
T S + P P+R++S+
Sbjct: 94 TTNSASNLVYTPSSLPKRSQSV 115
>At2g38800.1 68415.m04764 calmodulin-binding protein-related
contains similarity to potato calmodulin-binding protein
PCBP GI:17933110 from [Solanum tuberosum]
Length = 612
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 323 SEDEVVRTEDLSERSRADRVHGAGLQVDED 234
SE+E V+ +DL E+ + +G +VD D
Sbjct: 221 SEEEFVKMDDLEEKKEFENGNGGSCEVDID 250
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 66 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 158
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At2g28860.1 68415.m03508 cytochrome P450 family protein similar to
Cytochrome P450 61 (C-22 sterol desaturase) (SP:P54781)
{Saccharomyces cerevisiae}
Length = 493
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = +3
Query: 291 QIFRPDNFVFGQSG---AGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGIPT 449
++F+ + FG G +A H + S+ D R ++ CD + IPT
Sbjct: 419 EVFKRNFLTFGNGSHQCVGQRYAMNHLVLFIAMFSSMFDFKRVRSDGCDDIVHIPT 474
>At1g20400.1 68414.m02544 myosin heavy chain-related
Length = 944
Score = 27.1 bits (57), Expect = 7.4
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = -2
Query: 326 LSEDEVVRTED-LSERSRADRVHGAGLQVDEDGAGHVLAAGGFIVVYIDALQLQVRVPMV 150
LS+ RT D SERS ADR L D AG+ + + L+ ++ P+V
Sbjct: 151 LSDHRRSRTPDGSSERSGADRFRAESLDDDLVEAGYSSSGSSSRTSVVAELRRRISSPLV 210
Query: 149 STGGVDAVLVGDDLPELSSD 90
A P L+ +
Sbjct: 211 DRAETGAAATTTFKPRLTDE 230
>At5g58930.1 68418.m07382 expressed protein contains Pfam PF05340:
Protein of unknown function (DUF740)
Length = 521
Score = 26.6 bits (56), Expect = 9.8
Identities = 28/96 (29%), Positives = 41/96 (42%)
Frame = +3
Query: 135 DPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNF 314
+ G +HG L ER N S Y P + LE G+ V G++ + D F
Sbjct: 289 ETVGLFHGAKLLVTERELRDSNWYSIKNYKPES----LELGSK-GVGCVAAGEVKKQDGF 343
Query: 315 VFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 422
G +G NW+KG G L+ DV + E ++
Sbjct: 344 --GLKKSGKNWSKGWNFWG--LIQRKTDVAKNEMKT 375
>At2g34110.1 68415.m04176 hypothetical protein
Length = 123
Score = 26.6 bits (56), Expect = 9.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 335 GAGLSEDEVVRTEDLSERSRADRVHGAGLQVDEDGAGHVLAAGGFIV 195
GA L VV + D S R +G+ + D+DG +L GGF++
Sbjct: 29 GAILENIFVVNSRDFSSPER----NGSTVCDDDDGVEEILVVGGFLM 71
>At1g27595.1 68414.m03365 expressed protein similar to Symplekin
(SP:Q92797) {Homo sapiens}
Length = 1091
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 145 PVGSMPCSSEMISQNLAPIW 86
PVG C SE ++Q L +W
Sbjct: 655 PVGKEVCDSERVTQGLGAVW 674
>At1g10140.1 68414.m01143 expressed protein similar to EST
gb|AA598098
Length = 167
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 493 GCPYRNRCRRRASVSVGXPWRQSHDSASFRTTSKTESTS 377
GC R + ASVS P +S SA+F +++ + T+
Sbjct: 32 GCAARTQYSSSASVSAPFPRSRSSSSAAFSSSASSRRTT 70
>At1g08320.1 68414.m00920 bZIP family transcription factor contains
Pfam profile: PF00170 bZIP transcription factor
Length = 481
Score = 26.6 bits (56), Expect = 9.8
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -3
Query: 397 SKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSKSTRMARGTY 218
+ + STS PS LA P+ D K SG+++ K R ++ +R+ + Y
Sbjct: 141 ANSSSTSGLPSTSRTLAPPKPSEDKRKATTSGKQLDAKTLRRLAQNREAARKSRLRKKAY 200
Query: 217 L 215
+
Sbjct: 201 V 201
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,215,263
Number of Sequences: 28952
Number of extensions: 207143
Number of successful extensions: 677
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 927799552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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