Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J21
(611 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0610 - 25449085-25453284 31 0.72
04_04_0007 + 22119477-22120004 30 1.7
06_01_0041 + 403634-403817,404154-404332,404431-404536,404620-40... 29 2.2
02_01_0020 - 127572-127637,127760-127819,127903-128004,128099-12... 29 2.2
04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202 29 2.9
02_01_0279 - 1860410-1860508,1861536-1861889,1862660-1862805,186... 29 3.8
02_03_0120 + 15463163-15465250 25 4.4
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 28 5.1
09_02_0303 + 7112456-7113244,7113328-7113488,7114523-7114583,711... 28 5.1
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 28 5.1
06_01_0036 + 364316-365758 28 5.1
04_04_0964 - 29749624-29749649,29749742-29749945,29750036-297506... 28 5.1
03_01_0021 + 186827-187243 28 5.1
01_05_0534 + 22999876-23000333,23000835-23000949 28 5.1
04_04_0360 - 24684159-24684565,24684654-24685089 23 6.2
11_06_0202 - 21184217-21184503,21184622-21184982 24 6.4
08_02_1259 - 25676523-25676624,25676726-25676851,25677023-256771... 28 6.7
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 28 6.7
03_02_0020 - 5045900-5046211,5046233-5046290,5046604-5047242,504... 28 6.7
01_05_0666 + 24132641-24132768,24134854-24134860,24135042-241352... 28 6.7
09_02_0327 - 7284829-7284889,7284946-7286126 27 8.9
06_03_1178 + 28203466-28204590,28204745-28205652,28206189-28206258 27 8.9
05_04_0347 + 20479682-20479753,20480136-20480813,20481143-204821... 27 8.9
03_05_0069 - 20466717-20467373,20470285-20471247 27 8.9
02_02_0096 - 6727844-6727957,6728149-6728247,6728332-6728410,672... 27 8.9
02_01_0251 - 1652356-1652522,1652564-1652608,1652658-1652733,165... 27 8.9
01_06_0116 - 26595570-26596607,26596964-26598353,26599386-265999... 27 8.9
01_05_0463 + 22461169-22461216,22463153-22463248,22463334-224634... 27 8.9
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 27 8.9
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.1 bits (67), Expect = 0.72
Identities = 26/97 (26%), Positives = 32/97 (32%), Gaps = 1/97 (1%)
Frame = +3
Query: 153 PLSPPSTPPLMENKVELPLKKIAAKRARESSSPPAGLVTPQ-PSDSEGEDEFSKRSXXXX 329
P SP +PP + P + + E SSPP +P PS EG +S
Sbjct: 783 PHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSGHEGTPPSPVKSSSPP 842
Query: 330 XXXXXXXXXXXXXYRPSVIMRAHKDGTCSPEPLPPPP 440
P AH PE PPPP
Sbjct: 843 PEAHVSSPPPEKSSSPP--PEAHVSSPPPPEKSPPPP 877
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +3
Query: 153 PLSPP----STPPLMENKVELPLKKIAAKRARESSSPPA 257
PL PP S PP + + P K+ A A+ES PPA
Sbjct: 1327 PLPPPVPQVSLPPPKQESLPPPAKEAEAPPAKESKPPPA 1365
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +3
Query: 153 PLSPPSTPPLMENKVELPLKKIAAKRARESSSPPAGLVTPQPSDSEGED 299
P PP PPL+ V P K A + + S P P P + E+
Sbjct: 422 PSEPPEKPPLIPVPVGPPEKSPAYEEPPAAPSTPTSHGPPPPEEESPEE 470
>04_04_0007 + 22119477-22120004
Length = 175
Score = 29.9 bits (64), Expect = 1.7
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 10/141 (7%)
Frame = +2
Query: 74 CELKRKFLSVECSHSNQNVHS-----ARSLRTPLTAVNAAVDGK*SRAASQKDCRKTGER 238
C RKF S + +QN H AR R ++ AA + AAS D ++ G
Sbjct: 38 CYCPRKFRSSQALGGHQNAHKLQRNLARRGREAAASLAAAAAAAAAAAASSGDQQQQGRT 97
Query: 239 VVVAARRPGHAPALGL*RRRRVQQAIPMRAGALASHDAAP---GAVLQA--LGHHAGPQG 403
AA A G + A P A A A D A GA ++ HH QG
Sbjct: 98 TAAAA-----AVLAG------GESAPPAAARAAADLDGAGVWGGAGMRGRPAHHHRLMQG 146
Query: 404 RHLQSGASAAPARARHEHAQD 466
+ G+SAA R E A +
Sbjct: 147 GYSSGGSSAAGGRGNGELADE 167
>06_01_0041 +
403634-403817,404154-404332,404431-404536,404620-404936,
405231-405605,406199-406283,406570-408066,408575-408738
Length = 968
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 53 RSE*HKFCELKRKFLSVECSHSNQNVHS---ARSLRTPLTAVNAAVDGK*SRAASQKDCR 223
R E HK + K+ +E +S ++ S S RT TA + DG +A Q+D
Sbjct: 163 RKEQHKALQEKKNGPEIEKENSGHDIISLLQTPSERTATTAKSEKPDGSAISSAYQEDTT 222
Query: 224 KTGERVVVAARRP 262
KT + + RP
Sbjct: 223 KTSSVLSASTARP 235
>02_01_0020 -
127572-127637,127760-127819,127903-128004,128099-128194,
128649-128756,128849-128899,129018-130118
Length = 527
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 207 LKKIAAKRARESSSPPAGLVTPQPSDSEGEDE 302
++K+ +RA+E ++P P SDS+ EDE
Sbjct: 103 IEKLERRRAKEEAAPDDSFWEPTDSDSDEEDE 134
>04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202
Length = 234
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -2
Query: 301 SSSPSESEGWGVTRPAGGDDDSLARFAAIFLRGSSTLFSINGGVDG--GERG 152
S S G GV+ +GGD D R +AI RG + S++GG +G GE G
Sbjct: 156 SGGVSAGGGDGVSN-SGGDGDGNGRVSAIGQRGLDSDGSLDGGGNGDIGEGG 206
>02_01_0279 -
1860410-1860508,1861536-1861889,1862660-1862805,
1862885-1862925,1863010-1863173,1863217-1863281,
1863410-1863670,1863754-1863817,1863946-1864006,
1864112-1864473
Length = 538
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 402 DGTCSPEPLPPPP 440
+G+C P+P PPPP
Sbjct: 78 EGSCDPDPTPPPP 90
>02_03_0120 + 15463163-15465250
Length = 695
Score = 24.6 bits (51), Expect(2) = 4.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 417 PEPLPPPPAHGMNMLKTLKFKMNRG 491
P P PPPP H + + L +K+ G
Sbjct: 311 PPPSPPPPPHPNHRRRHLFYKVLGG 335
Score = 22.2 bits (45), Expect(2) = 4.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 414 SPEPLPPPPA 443
SP P PPPP+
Sbjct: 305 SPSPSPPPPS 314
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +3
Query: 153 PLSPPSTPPLMENKVELPLKKIAAKRARESSSPPAGLVTPQPSD 284
P +PP PP M LP I A SS PP L P P D
Sbjct: 374 PPNPPPPPPPMSPSCLLP-PIIPAPTFTYSSPPPPPLYYPPPPD 416
>09_02_0303 +
7112456-7113244,7113328-7113488,7114523-7114583,
7114665-7114733,7114862-7114947,7115399-7115456,
7115631-7115843,7116059-7116124,7116368-7116484,
7116595-7116657
Length = 560
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 478 LNLSVLSMFMPCAGGGGRGSG-LQVPSLWAR 389
L+ ++ + P A GGRG G VP+LWAR
Sbjct: 136 LHTALTRLAGPAARRGGRGGGGYPVPTLWAR 166
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/92 (26%), Positives = 35/92 (38%)
Frame = +3
Query: 165 PSTPPLMENKVELPLKKIAAKRARESSSPPAGLVTPQPSDSEGEDEFSKRSXXXXXXXXX 344
PS PP + + P+ A A S PP Q + +EGE+E K+
Sbjct: 20 PSPPPHADPRSAPPMPSSADADAPSSPPPPQ-----QEAAAEGEEEEEKKQQREEEEEAP 74
Query: 345 XXXXXXXXYRPSVIMRAHKDGTCSPEPLPPPP 440
P+ +A C+ +P PPPP
Sbjct: 75 APAPAPAP-EPAP-RKARLPRACNSKPKPPPP 104
>06_01_0036 + 364316-365758
Length = 480
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 111 PILTRMSTLLEVCGPLSPPSTPPLMENKVELPLKKIAAKRARESSSPPAGLVT 269
P L R + LL L PP+ P+ +++PLK +AA +A +SP T
Sbjct: 168 PPLLRAAALLR--DALLPPTALPVSSTPLDVPLK-LAAHKALADASPTVQFTT 217
>04_04_0964 -
29749624-29749649,29749742-29749945,29750036-29750634,
29750742-29750826,29750914-29751562,29751568-29751643,
29753891-29753957,29754097-29754998,29756579-29756790
Length = 939
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 467 CLEHVHAVRGRGRQRLRTAGAVLVG 393
CLE + VRGRG +RLR L G
Sbjct: 134 CLEGLERVRGRGHERLRVVAYRLGG 158
>03_01_0021 + 186827-187243
Length = 138
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 93 FYLLNVPILTRMSTLLEVCGPLSPPSTPPL 182
F LNV +M +++ C P P TPP+
Sbjct: 12 FLALNVLFTMQMGAVVQACEPYCPTPTPPV 41
>01_05_0534 + 22999876-23000333,23000835-23000949
Length = 190
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3
Query: 153 PLSPPSTPPLMENKVELPLKKIAAKRARESSSPPAGLVTPQPSDS 287
PLSPP P + L K A SSSPP P+P +
Sbjct: 53 PLSPPPKTPTLSTPPTLSQPPTPVKPAAPSSSPPPS-QDPEPKQA 96
>04_04_0360 - 24684159-24684565,24684654-24685089
Length = 280
Score = 23.4 bits (48), Expect(2) = 6.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 448 PCAGGGGRGSG 416
PC GGGG G G
Sbjct: 53 PCYGGGGGGGG 63
Score = 23.0 bits (47), Expect(2) = 6.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 439 GGGGRGSGLQVPSL 398
GGGG GSG+ V S+
Sbjct: 69 GGGGGGSGVSVESV 82
>11_06_0202 - 21184217-21184503,21184622-21184982
Length = 215
Score = 24.2 bits (50), Expect(2) = 6.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 414 SPEPLPPPP 440
SP PLPPPP
Sbjct: 175 SPSPLPPPP 183
Score = 22.2 bits (45), Expect(2) = 6.4
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 417 PEPLPPPPAHG 449
P P PPP +HG
Sbjct: 180 PPPPPPPTSHG 190
>08_02_1259 -
25676523-25676624,25676726-25676851,25677023-25677134,
25677294-25677385,25677751-25677828,25677910-25677989,
25678079-25678181,25678274-25678336,25678988-25679194
Length = 320
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 250 GDDDSLARFAAIFLRGSSTLFSINGGVDGGERGPQTSSRVDILVRMGT-FNR*KLSF 83
G + SL AIF + S G VD S +DI VR G FN +L+F
Sbjct: 239 GGEQSLKELNAIFSKPLREFLSSEGEVDDAALISVDSKGIDIRVRQGAQFNIQRLAF 295
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 132 TLLEVCGPLSPPSTPPLMENKVELPLKKIAAKRARESS 245
TLL + P P + PPL + LP +++A A SS
Sbjct: 10 TLLHLAAPRKPSAGPPLPPATLRLPSRRLARLTASCSS 47
>03_02_0020 -
5045900-5046211,5046233-5046290,5046604-5047242,
5048475-5048515,5048672-5048728,5048952-5049140
Length = 431
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 204 PLKKIAAKRARESSSPPAGLVTPQPSDSEG 293
PL+ AA A +++PPA + P ++EG
Sbjct: 38 PLRSRAAAAAASAAAPPAETIPDMPEETEG 67
>01_05_0666 +
24132641-24132768,24134854-24134860,24135042-24135230,
24136017-24136185,24136299-24136744,24137540-24137563,
24137736-24137828,24138806-24138884,24138979-24139063,
24139479-24139788,24140471-24140614
Length = 557
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 99 LLNVPILTRMSTLLEVCGPLSPPSTPPLM---ENKVE-LPL-KKIAAKRARESSSPPAGL 263
+LNVP+ ST++E P++ S PP + EN +P + + + + ++ PP +
Sbjct: 191 MLNVPVPLPQSTVMEDESPVAAVSLPPSVFKEENVASAIPFPQPVVKEESAAAAIPPPHV 250
Query: 264 VTPQPSDSEGEDEFSK 311
+ S S+ + +K
Sbjct: 251 ALKEESVSKSTENITK 266
>09_02_0327 - 7284829-7284889,7284946-7286126
Length = 413
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 369 YRPSVIMRAHKDGTCSPEPLPPPPAHG 449
Y+ +I AH P P PPPP G
Sbjct: 43 YKERIIFGAHPPPPPPPPPPPPPPPRG 69
>06_03_1178 + 28203466-28204590,28204745-28205652,28206189-28206258
Length = 700
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 384 IMRAHKDGTCSPEPLPPPP 440
I RA K G PE LPPPP
Sbjct: 226 IRRAKKGGVGGPEFLPPPP 244
>05_04_0347 +
20479682-20479753,20480136-20480813,20481143-20482195,
20482345-20482406,20482491-20482541,20482635-20482719,
20483253-20483342,20483472-20483563,20483704-20483728
Length = 735
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = +1
Query: 397 TRTAPAVRSLCRPRPRTA*TCSRHLNLK*TEDTVIHKPNTLRAKRLLPFRSPFNLPVPHR 576
+R AP V ++CRP +R L K V +P+T + + +P + +
Sbjct: 324 SRKAPEVATMCRPSTAERRPATRELAPKQANTVVPCRPSTPNRRPMTRELAPVHSSIATP 383
Query: 577 RLXKLAYRHP 606
R A R P
Sbjct: 384 RRPSTAERRP 393
>03_05_0069 - 20466717-20467373,20470285-20471247
Length = 539
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 332 LQLASGSLAELVFSFRVRGLGRDQAGGRRRRLSRPFCGNLFER 204
L+ A G A+ + + + GRD A R ++R FCGN+ R
Sbjct: 153 LRGARGEEADHLVRYVLVRCGRDGAAVDVRHVARHFCGNVIRR 195
>02_02_0096 -
6727844-6727957,6728149-6728247,6728332-6728410,
6728534-6728634,6728740-6728808,6729180-6729220,
6729992-6730836,6730924-6731027,6731479-6732354
Length = 775
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 390 RAHKDGTCSPEPLPPPP 440
R H+ + P PLPPPP
Sbjct: 35 RQHRRSSAQPPPLPPPP 51
>02_01_0251 -
1652356-1652522,1652564-1652608,1652658-1652733,
1652976-1653041,1653120-1653238,1653334-1653508,
1653604-1653881,1654253-1654436,1654455-1654550,
1654872-1655012,1655091-1655123
Length = 459
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 159 SPPSTPPLMENKVELPLKKIAAKRARESSSP 251
SPP PP +E V P+KK A R + +P
Sbjct: 221 SPPVPPPHVEEPVGEPVKKTYASILRTAKAP 251
>01_06_0116 -
26595570-26596607,26596964-26598353,26599386-26599923,
26600562-26601453
Length = 1285
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 396 HKDGTCSPEPLPPPPAH 446
H GT PLPPPP H
Sbjct: 630 HFSGTSPNHPLPPPPRH 646
>01_05_0463 +
22461169-22461216,22463153-22463248,22463334-22463446,
22463479-22463494,22463939-22464031,22464118-22464261,
22464508-22464596,22464687-22464792,22464874-22464961,
22465585-22465703,22465788-22465952,22466235-22466404,
22466488-22466597,22466682-22466791,22466886-22466996,
22467082-22467183,22467266-22467471,22467563-22467881,
22467983-22468093
Length = 771
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 502 HKPNTLRAKRLLPFRSPFNLPVPHRRLXKLAY 597
HKP T+ + + + F +PVPHR + LAY
Sbjct: 188 HKP-TMWTEAWTAWYTGFGIPVPHRPVEDLAY 218
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 123 RMSTLLEVCGPLSPPSTPPLMENKVELPLKKIAAKRARESSSPPA 257
R S + C + PP PP + V P ++ A S SPPA
Sbjct: 96 RRSPREKPCPTMQPPVKPPEELSPVGAPRSRVRAMPPSPSLSPPA 140
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,247,747
Number of Sequences: 37544
Number of extensions: 371490
Number of successful extensions: 2762
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2750
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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