Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_J20
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.9  
L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    24   4.4  
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    24   4.4  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   7.7  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +1

Query: 424  PLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHHSAGSS 585
            PLR+  F+QI G  QE    ++ K  +V   Y  L+T  Y+      H   G S
Sbjct: 2248 PLRKDTFEQIQGISQESSTDIWHK--LVDAGY--LHTDCYSTSAKKCHGLPGKS 2297


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +1

Query: 424  PLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHHSAGSS 585
            PLR+  F+QI G  QE    ++ K  +V   Y  L+T  Y+      H   G S
Sbjct: 2249 PLRKDTFEQIQGISQESSTDIWHK--LVDAGY--LHTDCYSTSAKKCHGLPGKS 2298


>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 418 QVPLRQKDFDQIWGDLQEGIEQVYKKQ 498
           + P  ++D    WG  QE +EQ+  +Q
Sbjct: 196 RTPGLEQDGFNFWGKFQESVEQLLAEQ 222


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 418 QVPLRQKDFDQIWGDLQEGIEQVYKKQ 498
           + P  ++D    WG  QE +EQ+  +Q
Sbjct: 196 RTPGLEQDGFNFWGKFQESVEQLLAEQ 222


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 44  FSPFIAXPSSXIHXLHVNLA 103
           F+P I  P S I  LH N A
Sbjct: 800 FTPNIGGPCSSIRRLHANCA 819


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,367
Number of Sequences: 2352
Number of extensions: 9973
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)