Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J20
(609 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537409-1|CAD97651.1| 776|Homo sapiens hypothetical protein pr... 81 4e-15
BC125120-1|AAI25121.1| 776|Homo sapiens cullin 1 protein. 81 4e-15
BC125119-1|AAI25120.1| 776|Homo sapiens cullin 1 protein. 81 4e-15
AF062536-1|AAC36681.1| 776|Homo sapiens cullin 1 protein. 81 4e-15
AC005229-1|AAM49153.1| 263|Homo sapiens cullin 1 protein. 81 4e-15
U58087-1|AAC50544.1| 752|Homo sapiens Hs-CUL-1 protein. 77 4e-14
U83410-1|AAC51190.1| 745|Homo sapiens CUL-2 protein. 30 7.3
BC110901-1|AAI10902.1| 745|Homo sapiens CUL2 protein protein. 30 7.3
BC009591-1|AAH09591.1| 745|Homo sapiens cullin 2 protein. 30 7.3
AL392046-4|CAI13165.1| 216|Homo sapiens cullin 2 protein. 30 7.3
AL392046-3|CAI13164.1| 706|Homo sapiens cullin 2 protein. 30 7.3
AL392046-2|CAI13163.1| 745|Homo sapiens cullin 2 protein. 30 7.3
AF126404-1|AAD23581.1| 745|Homo sapiens cullin 2 protein. 30 7.3
>BX537409-1|CAD97651.1| 776|Homo sapiens hypothetical protein
protein.
Length = 776
Score = 80.6 bits (190), Expect = 4e-15
Identities = 36/69 (52%), Positives = 47/69 (68%)
Frame = +1
Query: 391 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 570
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 571 SAGSSSRVP 597
+ + VP
Sbjct: 60 NQARGAGVP 68
>BC125120-1|AAI25121.1| 776|Homo sapiens cullin 1 protein.
Length = 776
Score = 80.6 bits (190), Expect = 4e-15
Identities = 36/69 (52%), Positives = 47/69 (68%)
Frame = +1
Query: 391 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 570
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 571 SAGSSSRVP 597
+ + VP
Sbjct: 60 NQARGAGVP 68
>BC125119-1|AAI25120.1| 776|Homo sapiens cullin 1 protein.
Length = 776
Score = 80.6 bits (190), Expect = 4e-15
Identities = 36/69 (52%), Positives = 47/69 (68%)
Frame = +1
Query: 391 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 570
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 571 SAGSSSRVP 597
+ + VP
Sbjct: 60 NQARGAGVP 68
>AF062536-1|AAC36681.1| 776|Homo sapiens cullin 1 protein.
Length = 776
Score = 80.6 bits (190), Expect = 4e-15
Identities = 36/69 (52%), Positives = 47/69 (68%)
Frame = +1
Query: 391 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 570
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 571 SAGSSSRVP 597
+ + VP
Sbjct: 60 NQARGAGVP 68
>AC005229-1|AAM49153.1| 263|Homo sapiens cullin 1 protein.
Length = 263
Score = 80.6 bits (190), Expect = 4e-15
Identities = 36/69 (52%), Positives = 47/69 (68%)
Frame = +1
Query: 391 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 570
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 571 SAGSSSRVP 597
+ + VP
Sbjct: 60 NQARGAGVP 68
>U58087-1|AAC50544.1| 752|Homo sapiens Hs-CUL-1 protein.
Length = 752
Score = 77.4 bits (182), Expect = 4e-14
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +1
Query: 391 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVH 564
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVH 57
>U83410-1|AAC51190.1| 745|Homo sapiens CUL-2 protein.
Length = 745
Score = 29.9 bits (64), Expect = 7.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 430 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 558
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
>BC110901-1|AAI10902.1| 745|Homo sapiens CUL2 protein protein.
Length = 745
Score = 29.9 bits (64), Expect = 7.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 430 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 558
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
>BC009591-1|AAH09591.1| 745|Homo sapiens cullin 2 protein.
Length = 745
Score = 29.9 bits (64), Expect = 7.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 430 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 558
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
>AL392046-4|CAI13165.1| 216|Homo sapiens cullin 2 protein.
Length = 216
Score = 29.9 bits (64), Expect = 7.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 430 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 558
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
>AL392046-3|CAI13164.1| 706|Homo sapiens cullin 2 protein.
Length = 706
Score = 29.9 bits (64), Expect = 7.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 430 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 558
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
>AL392046-2|CAI13163.1| 745|Homo sapiens cullin 2 protein.
Length = 745
Score = 29.9 bits (64), Expect = 7.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 430 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 558
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
>AF126404-1|AAD23581.1| 745|Homo sapiens cullin 2 protein.
Length = 745
Score = 29.9 bits (64), Expect = 7.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 430 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 558
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,976,596
Number of Sequences: 237096
Number of extensions: 1245340
Number of successful extensions: 2005
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2005
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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