BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_F_J16 (651 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 260 3e-69 M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 260 3e-69 BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 260 3e-69 BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 260 3e-69 BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 260 3e-69 AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 260 3e-69 AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 6e-19 BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 32 1.5 BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat tra... 30 8.2 BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat tra... 30 8.2 AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat tra... 30 8.2 AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 30 8.2 AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 30 8.2 AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 30 8.2 AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 30 8.2 AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 30 8.2 AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 30 8.2 AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 30 8.2 AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 30 8.2 AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 30 8.2 AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 30 8.2 AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. 30 8.2 >Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 protein. Length = 194 Score = 260 bits (637), Expect = 3e-69 Identities = 126/168 (75%), Positives = 147/168 (87%), Gaps = 1/168 (0%) Frame = +3 Query: 102 SQALVELETNSDLKAQLRXLYITKAKXIELHN-KXSIIIYVPMPKLKAFQKXQIRLVREL 278 SQAL+ELE NSDLKAQLR L IT AK IE+ + +III+VP+P+LK+FQK Q+RLVREL Sbjct: 24 SQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVREL 83 Query: 279 EKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKR 458 EKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKR Sbjct: 84 EKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKR 143 Query: 459 IRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 602 IRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE Sbjct: 144 IRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191 >M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. Length = 192 Score = 260 bits (637), Expect = 3e-69 Identities = 126/168 (75%), Positives = 147/168 (87%), Gaps = 1/168 (0%) Frame = +3 Query: 102 SQALVELETNSDLKAQLRXLYITKAKXIELHN-KXSIIIYVPMPKLKAFQKXQIRLVREL 278 SQAL+ELE NSDLKAQLR L IT AK IE+ + +III+VP+P+LK+FQK Q+RLVREL Sbjct: 22 SQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVREL 81 Query: 279 EKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKR 458 EKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKR Sbjct: 82 EKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKR 141 Query: 459 IRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 602 IRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE Sbjct: 142 IRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 189 >BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 protein. Length = 194 Score = 260 bits (637), Expect = 3e-69 Identities = 126/168 (75%), Positives = 147/168 (87%), Gaps = 1/168 (0%) Frame = +3 Query: 102 SQALVELETNSDLKAQLRXLYITKAKXIELHN-KXSIIIYVPMPKLKAFQKXQIRLVREL 278 SQAL+ELE NSDLKAQLR L IT AK IE+ + +III+VP+P+LK+FQK Q+RLVREL Sbjct: 24 SQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVREL 83 Query: 279 EKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKR 458 EKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKR Sbjct: 84 EKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKR 143 Query: 459 IRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 602 IRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE Sbjct: 144 IRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191 >BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 protein. Length = 194 Score = 260 bits (637), Expect = 3e-69 Identities = 126/168 (75%), Positives = 147/168 (87%), Gaps = 1/168 (0%) Frame = +3 Query: 102 SQALVELETNSDLKAQLRXLYITKAKXIELHN-KXSIIIYVPMPKLKAFQKXQIRLVREL 278 SQAL+ELE NSDLKAQLR L IT AK IE+ + +III+VP+P+LK+FQK Q+RLVREL Sbjct: 24 SQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVREL 83 Query: 279 EKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKR 458 EKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKR Sbjct: 84 EKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKR 143 Query: 459 IRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 602 IRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE Sbjct: 144 IRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191 >BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 protein. Length = 194 Score = 260 bits (637), Expect = 3e-69 Identities = 126/168 (75%), Positives = 147/168 (87%), Gaps = 1/168 (0%) Frame = +3 Query: 102 SQALVELETNSDLKAQLRXLYITKAKXIELHN-KXSIIIYVPMPKLKAFQKXQIRLVREL 278 SQAL+ELE NSDLKAQLR L IT AK IE+ + +III+VP+P+LK+FQK Q+RLVREL Sbjct: 24 SQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVREL 83 Query: 279 EKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKR 458 EKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKR Sbjct: 84 EKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKR 143 Query: 459 IRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 602 IRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE Sbjct: 144 IRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191 >AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. Length = 194 Score = 260 bits (637), Expect = 3e-69 Identities = 126/168 (75%), Positives = 147/168 (87%), Gaps = 1/168 (0%) Frame = +3 Query: 102 SQALVELETNSDLKAQLRXLYITKAKXIELHN-KXSIIIYVPMPKLKAFQKXQIRLVREL 278 SQAL+ELE NSDLKAQLR L IT AK IE+ + +III+VP+P+LK+FQK Q+RLVREL Sbjct: 24 SQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVREL 83 Query: 279 EKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKR 458 EKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKR Sbjct: 84 EKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKR 143 Query: 459 IRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 602 IRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE Sbjct: 144 IRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191 >AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 variant protein. Length = 78 Score = 93.5 bits (222), Expect = 6e-19 Identities = 44/52 (84%), Positives = 49/52 (94%) Frame = +3 Query: 384 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 539 SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61 >BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. Length = 577 Score = 32.3 bits (70), Expect = 1.5 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -3 Query: 556 TDWKVSTLCSIVVCWFLSKCTLMSCEPSNLTLMRLPTISAGKTKS 422 T W ++ LCS++ W L CT + P L+ L T+S+ KS Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKS 307 >BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat transmembrane neuronal 2 protein. Length = 516 Score = 29.9 bits (64), Expect = 8.2 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +3 Query: 480 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 563 SQL +HLD NQ +T+ K D FQ +YK Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110 >BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat transmembrane neuronal 2 protein. Length = 516 Score = 29.9 bits (64), Expect = 8.2 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +3 Query: 480 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 563 SQL +HLD NQ +T+ K D FQ +YK Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110 >AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat transmembrane neuronal 2 protein protein. Length = 516 Score = 29.9 bits (64), Expect = 8.2 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +3 Query: 480 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 563 SQL +HLD NQ +T+ K D FQ +YK Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110 >AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting 13 homolog A (S. cerevisiae) protein. Length = 3174 Score = 29.9 bits (64), Expect = 8.2 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +3 Query: 195 NKXSIIIYVPMPKLKAFQKXQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 374 +K + + V MPK K + K + +R +KK G + + +PKP T V+ K Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806 Query: 375 RPRSRTLTSVYDAILEDLVFP 437 + +T TS+ + + + P Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827 >AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting 13 homolog A (S. cerevisiae) protein. Length = 3095 Score = 29.9 bits (64), Expect = 8.2 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +3 Query: 195 NKXSIIIYVPMPKLKAFQKXQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 374 +K + + V MPK K + K + +R +KK G + + +PKP T V+ K Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806 Query: 375 RPRSRTLTSVYDAILEDLVFP 437 + +T TS+ + + + P Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827 >AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting 13 homolog A (S. cerevisiae) protein. Length = 3174 Score = 29.9 bits (64), Expect = 8.2 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +3 Query: 195 NKXSIIIYVPMPKLKAFQKXQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 374 +K + + V MPK K + K + +R +KK G + + +PKP T V+ K Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806 Query: 375 RPRSRTLTSVYDAILEDLVFP 437 + +T TS+ + + + P Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827 >AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting 13 homolog A (S. cerevisiae) protein. Length = 3095 Score = 29.9 bits (64), Expect = 8.2 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +3 Query: 195 NKXSIIIYVPMPKLKAFQKXQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 374 +K + + V MPK K + K + +R +KK G + + +PKP T V+ K Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806 Query: 375 RPRSRTLTSVYDAILEDLVFP 437 + +T TS+ + + + P Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827 >AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting 13 homolog A (S. cerevisiae) protein. Length = 3174 Score = 29.9 bits (64), Expect = 8.2 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +3 Query: 195 NKXSIIIYVPMPKLKAFQKXQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 374 +K + + V MPK K + K + +R +KK G + + +PKP T V+ K Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806 Query: 375 RPRSRTLTSVYDAILEDLVFP 437 + +T TS+ + + + P Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827 >AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting 13 homolog A (S. cerevisiae) protein. Length = 3095 Score = 29.9 bits (64), Expect = 8.2 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +3 Query: 195 NKXSIIIYVPMPKLKAFQKXQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 374 +K + + V MPK K + K + +R +KK G + + +PKP T V+ K Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806 Query: 375 RPRSRTLTSVYDAILEDLVFP 437 + +T TS+ + + + P Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827 >AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. Length = 3069 Score = 29.9 bits (64), Expect = 8.2 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +3 Query: 195 NKXSIIIYVPMPKLKAFQKXQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 374 +K + + V MPK K + K + +R +KK G + + +PKP T V+ K Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806 Query: 375 RPRSRTLTSVYDAILEDLVFP 437 + +T TS+ + + + P Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827 >AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. Length = 3135 Score = 29.9 bits (64), Expect = 8.2 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +3 Query: 195 NKXSIIIYVPMPKLKAFQKXQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 374 +K + + V MPK K + K + +R +KK G + + +PKP T V+ K Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806 Query: 375 RPRSRTLTSVYDAILEDLVFP 437 + +T TS+ + + + P Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827 >AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis protein. Length = 3174 Score = 29.9 bits (64), Expect = 8.2 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +3 Query: 195 NKXSIIIYVPMPKLKAFQKXQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 374 +K + + V MPK K + K + +R +KK G + + +PKP T V+ K Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806 Query: 375 RPRSRTLTSVYDAILEDLVFP 437 + +T TS+ + + + P Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827 >AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. Length = 3095 Score = 29.9 bits (64), Expect = 8.2 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +3 Query: 195 NKXSIIIYVPMPKLKAFQKXQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 374 +K + + V MPK K + K + +R +KK G + + +PKP T V+ K Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806 Query: 375 RPRSRTLTSVYDAILEDLVFP 437 + +T TS+ + + + P Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827 >AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. Length = 529 Score = 29.9 bits (64), Expect = 8.2 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +3 Query: 480 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 563 SQL +HLD NQ +T+ K D FQ +YK Sbjct: 98 SQLTWLHLDHNQISTV--KEDAFQGLYK 123 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 86,475,331 Number of Sequences: 237096 Number of extensions: 1803153 Number of successful extensions: 3153 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3088 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3147 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 7253890590 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -