Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J15
(839 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 432 e-120
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 235 1e-60
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 197 3e-49
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 184 3e-45
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 174 3e-42
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 165 2e-39
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 158 2e-37
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 140 5e-32
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 124 3e-27
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 124 4e-27
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 121 2e-26
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 118 1e-25
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 116 7e-25
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 109 6e-23
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 105 2e-21
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 101 2e-20
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 99 1e-19
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 89 1e-16
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 83 6e-15
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 82 2e-14
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 76 1e-12
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 74 4e-12
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 72 2e-11
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 72 2e-11
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 61 4e-08
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 55 3e-06
UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5; Euteleos... 48 2e-04
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 47 5e-04
UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillar... 44 0.005
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 41 0.045
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 40 0.078
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 40 0.10
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 39 0.18
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 38 0.24
UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2; Lactoc... 36 1.3
UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 34 5.1
UniRef50_Q6IMG0 Cluster: GRP21; n=11; Eukaryota|Rep: GRP21 - Ara... 33 6.8
UniRef50_Q22779 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_Q2HF67 Cluster: Putative uncharacterized protein; n=2; ... 33 6.8
UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 6.8
UniRef50_Q5QLZ3 Cluster: Gastric mucin-like protein; n=4; Oryza ... 33 8.9
UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 432 bits (1064), Expect = e-120
Identities = 212/252 (84%), Positives = 218/252 (86%)
Frame = +3
Query: 84 AVPHQKSPQKPRHSALGNGVXRFSKSKLFHKQAKYKFIGXXXXXXXXXXXLTVVVKQIGG 263
A+ +KS +KPR+ LGNGV RFSKSK+FHK+AKYKFIG LTVVVKQIGG
Sbjct: 19 ALTKKKSTKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGG 78
Query: 264 EKXGGTRTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGK 443
EK GGTRTVPLKRRKSFYPTQEKI ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGK
Sbjct: 79 EKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGK 138
Query: 444 RVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXX 623
RVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF
Sbjct: 139 RVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKN 198
Query: 624 XXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 803
EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA
Sbjct: 199 KKCVKRTVKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 258
Query: 804 AFGLRSXQYPHR 839
AFGLRS QYPHR
Sbjct: 259 AFGLRSSQYPHR 270
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 235 bits (575), Expect = 1e-60
Identities = 123/254 (48%), Positives = 157/254 (61%)
Frame = +3
Query: 78 QVAVPHQKSPQKPRHSALGNGVXRFSKSKLFHKQAKYKFIGXXXXXXXXXXXLTVVVKQI 257
+VA +K + P +S L G+ R+SK++++ ++A Y+ VK+I
Sbjct: 9 KVAKSAKKGKKHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKI 68
Query: 258 GGEKXGGTRTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHA 437
GG K GG RTV LK+ K+ YPT+ + FS+H R R NL GTV ILLAGRH
Sbjct: 69 GGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQ 128
Query: 438 GKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFX 617
GKRVVL+ +L SGLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H ND YF
Sbjct: 129 GKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFR 188
Query: 618 XXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYL 797
DIFA KKE++VP+EQRK DQK VD A++K I A P+ K YL
Sbjct: 189 RLKAKKDKKTGEA---DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYL 245
Query: 798 KAAFGLRSXQYPHR 839
+ F L S QYPHR
Sbjct: 246 QNMFALHSSQYPHR 259
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 197 bits (480), Expect = 3e-49
Identities = 108/262 (41%), Positives = 151/262 (57%), Gaps = 6/262 (2%)
Frame = +3
Query: 72 HLQVAVPHQKSPQKPRHSALGNGVXRFSKSKLFHKQA----KYKFIGXXXXXXXXXXXLT 239
+L+ P + P R+ L G+ R+S+S ++ ++A KY L
Sbjct: 31 NLKAKKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLA 90
Query: 240 VVVKQIGGEKXGGTRTVPLKRRKSFYPTQE--KICASSGGRPFSKHVRRIRPNLKIGTVC 413
V K +GG+K GGTR V L++ +YPT++ + S G +PFS+HVR++R ++ GT+
Sbjct: 91 TVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTIL 150
Query: 414 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 593
I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PK
Sbjct: 151 IILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPK 210
Query: 594 HFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 773
H D YF EG +IF T+KEKY +EQRK DQK VD ++ I A P
Sbjct: 211 HLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ 266
Query: 774 KKVLRGYLKAAFGLRSXQYPHR 839
L+GYL++ F L + YPH+
Sbjct: 267 ---LQGYLRSVFALTNGIYPHK 285
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 184 bits (447), Expect = 3e-45
Identities = 103/247 (41%), Positives = 142/247 (57%), Gaps = 2/247 (0%)
Frame = +3
Query: 105 PQKPRHSALGNGVXRFSKSKLFHKQAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKXGGTR 284
P P++ L GV FS+SK+FHK+ +K V VK++ GEK GG R
Sbjct: 22 PGVPKNHKLPGGVWLFSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKR 81
Query: 285 TVPLKRRKSFYPTQE--KICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 458
+PLK+ + YPT++ + +S +P S+ +R + GTV ILLAG H GKRVV +
Sbjct: 82 VLPLKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHRGKRVVFL 141
Query: 459 GILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXX 638
L +GLL VTGP+ N CPLRRI Q YVI TST++ L KLP+ +D YF
Sbjct: 142 KQLKTGLLPVTGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPEGLDDRYF--KRNKGP 199
Query: 639 XXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLR 818
EG +IF K +++V SE+ K Q VD+ V++A+ A P+KK+L YL A F LR
Sbjct: 200 KRGRKDEG-EIFEAKPQEHVVSEEHKKTQAEVDKQVLEAVKAHPEKKMLLHYLAATFSLR 258
Query: 819 SXQYPHR 839
+ YPH+
Sbjct: 259 NRMYPHK 265
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 174 bits (423), Expect = 3e-42
Identities = 94/200 (47%), Positives = 124/200 (62%)
Frame = +3
Query: 240 VVVKQIGGEKXGGTRTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCIL 419
V+ K+IGG+K GGTR V ++ FYP + +K+ +IR +L+ GT+ IL
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILIL 103
Query: 420 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 599
LAG + GKRVVL+ L SGLLLV+GP N PLRR+ Q+ VI TSTRI + N K+P+H
Sbjct: 104 LAGVNRGKRVVLLKALKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEHI 163
Query: 600 NDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKK 779
ND YF EG DIFA+K E+Y P+EQRK DQ VD ++KAI A+PD
Sbjct: 164 NDTYF----RRHKVKKEAKEG-DIFASKPERYTPTEQRKKDQAEVDVQLLKAIKAQPDAA 218
Query: 780 VLRGYLKAAFGLRSXQYPHR 839
+L YL+ FGL++ PHR
Sbjct: 219 MLVKYLRTIFGLKNNMIPHR 238
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 165 bits (400), Expect = 2e-39
Identities = 97/250 (38%), Positives = 133/250 (53%)
Frame = +3
Query: 87 VPHQKSPQKPRHSALGNGVXRFSKSKLFHKQAKYKFIGXXXXXXXXXXXLTVVVKQIGGE 266
+P + R+ L G+ R+S+S ++ K+A YK T K IGG+
Sbjct: 1 MPAKSKDHPSRNPELAPGISRYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT-KDIGGD 59
Query: 267 KXGGTRTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKR 446
K GG R VP++R +YPT++ + R + ++R ++ GTV ILLAG H GKR
Sbjct: 60 KNGGKRVVPVQRESRYYPTED-VRRRLANRK-KPGMAKLRSSITPGTVLILLAGAHRGKR 117
Query: 447 VVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXX 626
VV + L SGLLLVTGPF N PLRRIPQ YVI TST I + + KLP+H F
Sbjct: 118 VVFLKQLNSGLLLVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEH----AFADES 173
Query: 627 XXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAA 806
+D+F E+ PSEQR DQK VD+ ++ I A P+ ++ YL +
Sbjct: 174 YFKGEPKKKKRSEDMFEEAAEEKKPSEQRIADQKAVDDQILPKISAVPN---MKKYLSSL 230
Query: 807 FGLRSXQYPH 836
F LR Q+PH
Sbjct: 231 FSLRKGQFPH 240
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 158 bits (383), Expect = 2e-37
Identities = 77/160 (48%), Positives = 101/160 (63%)
Frame = +3
Query: 360 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 539
FS HVR+IR +++ GTV ILLAG H GKRV+ + L SGLLLVTGPF +N PLRR+ Q
Sbjct: 80 FSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLKALKSGLLLVTGPFKYNGVPLRRVNQC 139
Query: 540 YVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKT 719
YVI TSTRI + F +PKH +D+YF + +F+T+ +KY S+ RK
Sbjct: 140 YVIATSTRIDISKFDVPKHIDDEYF----RRVDLKESKTDAGKLFSTETKKYTVSDIRKE 195
Query: 720 DQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSXQYPHR 839
DQK VD + AI + PD K+L YL++ F L YPH+
Sbjct: 196 DQKLVDNQIRAAIKSHPDSKILHAYLRSLFSLGKRDYPHK 235
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 140 bits (338), Expect = 5e-32
Identities = 75/154 (48%), Positives = 93/154 (60%), Gaps = 1/154 (0%)
Frame = +3
Query: 381 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 557
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q +VI TS
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATS 126
Query: 558 TRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVD 737
++++ K+P+H ND+YF G +IFA+ K +Y SEQRK D KTVD
Sbjct: 127 LKVNVSGVKIPEHINDEYFKRKSTAQKT------GKNIFASGKTEYTVSEQRKKDIKTVD 180
Query: 738 EAVIKAIGARPDKKVLRGYLKAAFGLRSXQYPHR 839
++ AI P+ K L GYL F L QYPH+
Sbjct: 181 APILAAIKKHPEHKFLFGYLGTRFSLGKNQYPHK 214
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 124 bits (299), Expect = 3e-27
Identities = 87/247 (35%), Positives = 126/247 (51%)
Frame = +3
Query: 96 QKSPQKPRHSALGNGVXRFSKSKLFHKQAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKXG 275
Q++ + R+ L GV ++S+S+++HK+ + + V
Sbjct: 5 QRTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKV---------- 54
Query: 276 GTRTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 455
P+++ FYP ++ + R +K + +R ++ GTV I+LAGR GKRVV
Sbjct: 55 ---DAPVEKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVF 109
Query: 456 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXX 635
+ L SGLLLVTGPF N PLRR+ Q YVIGTST++ + L K F+D YF
Sbjct: 110 LKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYF---GKVA 165
Query: 636 XXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 815
EG+ A K+EK + +K DQK VD A+IKAI A P+ L+ YL A F L
Sbjct: 166 EKKKKKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPE---LKTYLGARFSL 222
Query: 816 RSXQYPH 836
+ PH
Sbjct: 223 KQGMKPH 229
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 124 bits (298), Expect = 4e-27
Identities = 66/132 (50%), Positives = 81/132 (61%)
Frame = +3
Query: 360 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 539
F+ H RRIR ++ G V ILLAGRH KRVV + L SGLLLVTGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 540 YVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKT 719
YVI T TRI + N K+P ND++F D IFA +++KY S+ RK
Sbjct: 146 YVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSV-----DKIFAEEEKKYTVSDDRKK 200
Query: 720 DQKTVDEAVIKA 755
QK VD A+I A
Sbjct: 201 LQKQVDTALIAA 212
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 121 bits (292), Expect = 2e-26
Identities = 75/201 (37%), Positives = 102/201 (50%)
Frame = +3
Query: 234 LTVVVKQIGGEKXGGTRTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVC 413
+ ++ K IGG K GG R VP K+ +YP +K + K + +RP++K GT+
Sbjct: 20 IKMIKKPIGGAKNGGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIV 78
Query: 414 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 593
ILLAG G RVV++ L SG LLVTGP+A N PL R+ QRYVI TST I + + K
Sbjct: 79 ILLAGVFRGSRVVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATSTSIDVSKVDV-K 137
Query: 594 HFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 773
++ YF D ++K E R DQK +D ++ I P
Sbjct: 138 KIDNAYFRKPQKKKKTDVMEV---DTAKKDEQKTKAIEARIADQKAIDAVLLPVIEKEP- 193
Query: 774 KKVLRGYLKAAFGLRSXQYPH 836
+L YLK F L+ QYPH
Sbjct: 194 --LLSSYLKVKFSLKKGQYPH 212
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 118 bits (285), Expect = 1e-25
Identities = 72/188 (38%), Positives = 100/188 (53%)
Frame = +3
Query: 276 GTRTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 455
G R + K K F P+ S+ + + V +R ++ GTV I+LAGR AGKRVV
Sbjct: 54 GKRVIAAKASK-FAPSIPAEIRSTAAKKVQQKVA-LRKSITPGTVLIILAGRFAGKRVVA 111
Query: 456 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXX 635
+ L SGL+L+TGPF N PLRRI QRYVI TST+I + + K+ ND YF
Sbjct: 112 LKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKST 171
Query: 636 XXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 815
D+ K EK ++ R DQK+VD A++ + +K L YLK F L
Sbjct: 172 TKSEGAFFSDE---KKAEKKKIADSRVADQKSVDSAILAVL---KKEKFLTVYLKTKFYL 225
Query: 816 RSXQYPHR 839
+ ++PH+
Sbjct: 226 KKGEFPHQ 233
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 116 bits (279), Expect = 7e-25
Identities = 73/155 (47%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Frame = +3
Query: 378 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTS 557
++R ++ GTV ILLAGR GKRVV + L SGLLLVTGPF N P+RR+ Q YVI TS
Sbjct: 73 KLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLVTGPFKINGVPIRRVNQPYVIATS 132
Query: 558 TRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKE--KYVPSEQRKTDQKT 731
T++ + + K F+D YF EG ++F T+KE K +P E +K DQK
Sbjct: 133 TKVDISGVNVEK-FDDKYF---SRDKKQKAKKTEG-ELFETEKEATKNLP-EFKKEDQKV 186
Query: 732 VDEAVIKAIGARPDKKVLRGYLKAAFGLRSXQYPH 836
VD +IKAI A PD L+ YL A F LR PH
Sbjct: 187 VDAELIKAIEAVPD---LKTYLGARFSLRDGDKPH 218
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 109 bits (263), Expect = 6e-23
Identities = 63/165 (38%), Positives = 93/165 (56%)
Frame = +3
Query: 345 SGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLR 524
S R S ++R +L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N P+R
Sbjct: 23 SSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGVPVR 82
Query: 525 RIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPS 704
R+ Y+I TST++ + + K F D+YF D TK + V S
Sbjct: 83 RVNPAYIIATSTKVDVSKADVSK-FTDEYFKVDRSKLKKSKDAFM-DQGEETKVNRVV-S 139
Query: 705 EQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSXQYPHR 839
E+RK Q+ +D ++I +I + P ++ YLK F L S +PH+
Sbjct: 140 EERKKTQQALDASIIPSIQSNP---LMMSYLKTRFTLTSGMFPHK 181
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 105 bits (251), Expect = 2e-21
Identities = 74/210 (35%), Positives = 107/210 (50%), Gaps = 10/210 (4%)
Frame = +3
Query: 237 TVVVKQIGG-EKXG-GTRTVPLKRRKS--FYPTQEKICASSGGRPFSKHVRRIRPNLKIG 404
T+ K +G +K G G R +P +K+ +YP ++ + + H ++RP+L+ G
Sbjct: 4 TLDSKSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPG 61
Query: 405 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF- 581
T+ ILLAGR GKRV+L+ L G+LLVTGPF N PLRR+ RYVI TS+ + L
Sbjct: 62 TILILLAGRFRGKRVILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVIATSSTVDLNGVD 121
Query: 582 --KLPKHFNDDYFXXXXXXXXXXXXXXEGDDIF---ATKKEKYVPSEQRKTDQKTVDEAV 746
L K +YF +G++ F K EK + R DQK +D+A+
Sbjct: 122 QKTLEKVSQPEYF------TREKAEQKKGEEAFFKQGEKPEKKKVASARAADQKAIDQAL 175
Query: 747 IKAIGARPDKKVLRGYLKAAFGLRSXQYPH 836
+ I P L YL + F LR+ PH
Sbjct: 176 LATIKKEP---FLGSYLASTFSLRTGDKPH 202
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 101 bits (242), Expect = 2e-20
Identities = 65/180 (36%), Positives = 100/180 (55%)
Frame = +3
Query: 297 KRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 476
++ +YP+++ + A R ++ +++R +L GTV ILLAGR GKRVV + L
Sbjct: 4 QKAPKWYPSED-VAALKKTRKAARP-QKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDN 61
Query: 477 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXX 656
LL++GPF N PLRR+ RYVI TST++S+ + K FN +YF
Sbjct: 62 TLLISGPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEK-FNVEYFAKEKLTKKEKKEA- 119
Query: 657 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSXQYPH 836
++F ++ K + +E R DQK VD+A+I I P +L+ YL A+F L++ PH
Sbjct: 120 ---NLFPEQQNKEIKAE-RVEDQKVVDKALIAEIKKTP---LLKQYLSASFSLKNGDKPH 172
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 99.1 bits (236), Expect = 1e-19
Identities = 50/120 (41%), Positives = 67/120 (55%)
Frame = +3
Query: 477 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXX 656
L GPF+ N P+RRI Q++V+ TST+I + K+P DDYF
Sbjct: 10 LFTFLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYFKRTKYFGK------ 63
Query: 657 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSXQYPH 836
E DIF K++Y ++ RK DQKT+D AV+ +I D K+L GYL+ FGL QYPH
Sbjct: 64 EKKDIFEQGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLRTNFGLSKRQYPH 123
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 89.4 bits (212), Expect = 1e-16
Identities = 72/204 (35%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Frame = +3
Query: 288 VPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 467
V L RRK+ K GR ++ V ++R +LK G V ILL G + GKRVVL+ +L
Sbjct: 12 VKLNRRKTVVTRLGK--TKVVGRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVL 68
Query: 468 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 647
SGLLLVTGPF+FN PLRR+ RYVI TST + ++ P++
Sbjct: 69 KSGLLLVTGPFSFNGVPLRRVNSRYVIATSTNV----YEFPEYDGSSLKSSVERAVSDLT 124
Query: 648 XXXEGDD------IFATKKEKYVPSEQRKTDQKTVDE------AVIKAIGARPD------ 773
G F +K+K + D+ +V E A +KA+ ++ D
Sbjct: 125 DESFGKTKETKLAEFKDRKKKNKNKDSMFVDEPSVSEKSPELMAKLKALQSKVDDVLVPS 184
Query: 774 -KKV--LRGYLKAAFGLRSXQYPH 836
KK L YLK+ F LR+ YPH
Sbjct: 185 LKKSQHLTKYLKSRFTLRNNMYPH 208
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 83.4 bits (197), Expect = 6e-15
Identities = 54/148 (36%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Frame = +3
Query: 402 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 581
G V ILL+GR GKRVV + L SGLLLVTGPF N PL+R+ YVI TST++ +
Sbjct: 61 GQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKINGVPLKRVNSAYVIPTSTKVDVTGV 120
Query: 582 KLPKHFNDDYFXXXXXXXXXXXX---XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIK 752
NDDYF G+ + + + ++ QK+VD A+I
Sbjct: 121 N-ANQINDDYFKRTQAQRRKNEQGFWAKRGELTVEQQTAEKTRLDGKRNTQKSVDAALIT 179
Query: 753 AIGARPDKKVLRGYLKAAFGLRSXQYPH 836
AI ++L+ YL A F + PH
Sbjct: 180 AI---KKTQLLKQYLGARFTIGKTTRPH 204
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 81.8 bits (193), Expect = 2e-14
Identities = 72/188 (38%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
Frame = +3
Query: 354 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRR 527
RP K +R P + GTV ILLAGR GKRVVL+ L G+LLVTGPF N PLRR
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRR 83
Query: 528 IPQRYVIGTSTRISLGNF---KL-----PKHF---------NDDYFXXXXXXXXXXXXXX 656
+ RYVI TS ++ L K+ PK+F ++ F
Sbjct: 84 VNARYVIATSQKVDLAGIDEAKINEIAQPKYFTAEKSKEKAGEEAFFKQGEKPQVRLGNS 143
Query: 657 E------GDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKV--LRGYLKAAFG 812
E DI KKE S R DQK +D+A+I I KKV L YL ++F
Sbjct: 144 ELEHGAHNADIVMQKKE---VSSSRVADQKAIDKALIANI-----KKVEFLASYLASSFT 195
Query: 813 LRSXQYPH 836
LR PH
Sbjct: 196 LRKGDKPH 203
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 75.8 bits (178), Expect = 1e-12
Identities = 71/254 (27%), Positives = 112/254 (44%)
Frame = +3
Query: 78 QVAVPHQKSPQKPRHSALGNGVXRFSKSKLFHKQAKYKFIGXXXXXXXXXXXLTVVVKQI 257
+V P + R+ L G R+S L+ + KY + + V+K +
Sbjct: 36 KVKRPRKGKSHCTRNPILVRGTGRYSIKALYER--KYSAVKSKCEKKKKEKVVATVIKTV 93
Query: 258 GGEKXGGTRTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHA 437
G+K GGT V L++ K + + C + P KH + + N TV I++ G+H
Sbjct: 94 SGDKNGGTGVVKLQKMKMYLGS----CKAMAKSPAFKHEKAVC-NSTPETVLIIITGQH- 147
Query: 438 GKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFX 617
+RVV + L G LL+TGP A N L R Q+ V+ TST I+ D YF
Sbjct: 148 -RRVVFLKQLSRGFLLITGPLALNLVLLYRTHQKSVVITSTTINTQ--------TDVYF- 197
Query: 618 XXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYL 797
+ IF +K+KY +Q K D KT+D ++ P +K+ +L
Sbjct: 198 ---KMKQLHKPRHQQGKIFDMEKDKY-GIKQCKADHKTLDSQIL------PKRKL---FL 244
Query: 798 KAAFGLRSXQYPHR 839
++F L + PH+
Sbjct: 245 NSSFSLANGMCPHK 258
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 74.1 bits (174), Expect = 4e-12
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Frame = +3
Query: 381 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 557
+R + G + I+LAGR G+R V++ LP +G L+V+GP +N P+RRI RYVI TS
Sbjct: 29 LRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATS 88
Query: 558 TRISLGN----------FKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSE 707
T + + + F+ PK + + +K + S+
Sbjct: 89 TTVDISSVDTAPITAEVFQRPKAEKPTKSEGDFMGDKQKAKAEKAAKKTSKAGKKTLVSD 148
Query: 708 QRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSXQYPHR 839
R QK +D A+I AI K GYL++ F ++ PHR
Sbjct: 149 ARAQLQKKIDAALIAAIKKDAQGKEKAGYLRSVFTVKPGDAPHR 192
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/70 (52%), Positives = 43/70 (61%)
Frame = +3
Query: 405 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFK 584
TV I+L GRH GKRVV + L SGLLLVTGP A N PL R+ Q VI T T++ + K
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVDICKVK 72
Query: 585 LPKHFNDDYF 614
KH D F
Sbjct: 73 TSKHLTDASF 82
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 71.7 bits (168), Expect = 2e-11
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = +3
Query: 375 RRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 554
R++R ++++G V I+L G+H GKR ++ +L SGLL V GP+ N PL+R+ RY+I T
Sbjct: 68 RKMRSSIQVGKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVT 127
Query: 555 STRI 566
ST I
Sbjct: 128 STNI 131
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/75 (42%), Positives = 41/75 (54%)
Frame = +3
Query: 441 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 620
KRVV + L SGLLL+TG F N PLRR+ Q YVI TST++ + + K F+D YF
Sbjct: 156 KRVVFLKQLSSGLLLITGSFKINGVPLRRVNQAYVIATSTKVDIPKVNVEK-FDDKYFAK 214
Query: 621 XXXXXXXXXXXXEGD 665
+GD
Sbjct: 215 KVQKKRRSWALDKGD 229
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 54.8 bits (126), Expect = 3e-06
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +3
Query: 384 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTR 563
RP+LK+GTV I++ G H GKR V+V +G++ + GP P+ I Q Y+I TST
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGPVV----PVNEISQDYLIATSTS 108
Query: 564 ISL 572
I +
Sbjct: 109 IEV 111
>UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5;
Euteleostomi|Rep: 60S ribosomal protein L6 -
Scophthalmus maximus (Turbot)
Length = 54
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = +3
Query: 684 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSXQYPHR 839
KEKY +EQRK DQK VD ++ + P LRGYL+++F L YPH+
Sbjct: 3 KEKYQLTEQRKEDQKAVDAQLLTLVKKTPQ---LRGYLRSSFCLSGGVYPHK 51
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 47.2 bits (107), Expect = 5e-04
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +3
Query: 384 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTR 563
R +L G V ++L G A +RVV + L + L GP + N PL RI +RY++ TST
Sbjct: 24 RTDLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSINGIPLFRIDERYLLATSTV 83
Query: 564 ISL 572
+ L
Sbjct: 84 LDL 86
>UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillardia
theta|Rep: 60S ribosomal protein L6B - Guillardia theta
(Cryptomonas phi)
Length = 169
Score = 44.0 bits (99), Expect = 0.005
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +3
Query: 390 NLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRIS 569
+ KIG + I+ + GK+ V +G G LL++G FN +I +YV+ + +
Sbjct: 41 DFKIGDILIIKKRNNYGKKCVFLGHTDDGNLLLSGIMKFNGIGYLKIHWKYVVKSGVSLK 100
Query: 570 LGNFKLPKHFNDDY 611
NF L KH N DY
Sbjct: 101 GLNF-LTKHTNKDY 113
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 40.7 bits (91), Expect = 0.045
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +3
Query: 387 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYV 545
P + +G + +++AGR AG++VV+V I+ +LVTG N RR+ +++
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHI 53
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 39.9 bits (89), Expect = 0.078
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 384 RPNLKIGTVCILLAGRHAGKRVVLVGILP 470
+P +K G VCI+L GRHAGK+ V+V LP
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 39.5 bits (88), Expect = 0.10
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 387 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 530
P +++G VCI AGR AGK V+V IL ++V G C ++ +
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHL 49
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 38.7 bits (86), Expect = 0.18
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +3
Query: 378 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 518
++R ++ GTV I+LAGR VV + L SGLLL+TG F N P
Sbjct: 227 KLRASITPGTVLIILAGR-----VVFLKQLSSGLLLITGSFKINDVP 268
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 38.3 bits (85), Expect = 0.24
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 393 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISL 572
+ IG V + + GR AG++ V+V I+ +++TGP RR+ ++ T +I +
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKKIDI 64
>UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2;
Lactococcus lactis subsp. cremoris|Rep:
Cation-transporting ATPase - Lactococcus lactis subsp.
cremoris (strain MG1363)
Length = 841
Score = 35.9 bits (79), Expect = 1.3
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +3
Query: 444 RVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR--YVIGTSTRIS 569
+++++GI+P +L++ F F+S L IPQR +IGT+ I+
Sbjct: 215 KIIVIGIIPISILVLLNQFVFSSLDLSVIPQRKTAIIGTAATIT 258
>UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas syringae pv. syringae
(strain B728a)
Length = 676
Score = 33.9 bits (74), Expect = 5.1
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +3
Query: 351 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 509
GR ++ R++RP LK+ + + G +A V G L +G+ L+T PFAF+
Sbjct: 617 GRQLAEIARQLRPELKV----LFITG-YAEHAAVRGGFLDTGMQLITKPFAFD 664
>UniRef50_Q6IMG0 Cluster: GRP21; n=11; Eukaryota|Rep: GRP21 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1193
Score = 33.5 bits (73), Expect = 6.8
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +1
Query: 547 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLS--SAKP 720
S P S+ + +S I+ +S S S + ++ P+ K ++ S S+KP
Sbjct: 1048 STKPKSKPSSKPTSKPSSKPISKPSTKSTSKPSSKSTSKPSTKPKSKPSSKPTSKPSSKP 1107
Query: 721 IRRQSTRL*SKPSEPDPTRRCSADTSKRPS 810
I + ST+ SKPS PT + S ++ +PS
Sbjct: 1108 ISKPSTKSTSKPSS-KPTSKPSTVSASKPS 1136
>UniRef50_Q22779 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 612
Score = 33.5 bits (73), Expect = 6.8
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 3 FFLSPGFASWLQHSLKRRPSLLPHLQVAVPHQKSPQKPRHSALGNGVXRFSKSKLFHKQA 182
FFL FA +L + +RPS Q + P+Q+ P KP ++ N + S+ + QA
Sbjct: 155 FFLEFAFAYFLSMTTPKRPSPAVQRQNSSPYQRPPSKPARKSVKNEGSQPSRPERRQTQA 214
>UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1;
Glyptapanteles indiensis|Rep: Putative uncharacterized
protein - Glyptapanteles indiensis
Length = 1065
Score = 33.5 bits (73), Expect = 6.8
Identities = 24/83 (28%), Positives = 44/83 (53%)
Frame = +1
Query: 562 EFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTR 741
++ S N ++I S + N QSN++ + T++P K+N+ H S+ P+ Q++
Sbjct: 523 QYMSINQNSFKQDLLIGSPE-NNIYNHQSNSRTIRTTIPSMKQNSTHPSN--PM-HQTSE 578
Query: 742 L*SKPSEPDPTRRCSADTSKRPS 810
L S+ + P ++ S S RPS
Sbjct: 579 L-SQQRQSQPNQQDSQQHSHRPS 600
>UniRef50_Q2HF67 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 240
Score = 33.5 bits (73), Expect = 6.8
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 574 ATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*S- 750
A + T ++ SRR S V S R+ S+P + RN +P ++Q T S
Sbjct: 20 APTRTSATLSLLCSRRHLPVS-VASTTTRLAHSIP-RPRNGSPFGQKQPQQQQQTITPSP 77
Query: 751 KPSEPDPTRRCSADTSKRP 807
PSEP PT +A +S +P
Sbjct: 78 SPSEPSPTAPATATSSPQP 96
>UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 331
Score = 33.5 bits (73), Expect = 6.8
Identities = 29/89 (32%), Positives = 42/89 (47%)
Frame = +1
Query: 550 APPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRR 729
AP S+TS+ QN S +SR ++++S+ S AKR K T SS+ P +R
Sbjct: 15 APSSTNGSSTSSAQNASGT-SSRTVKTSSS--SPAKRGDVKESSKPSRTVTASSSSPAKR 71
Query: 730 QSTRL*SKPSEPDPTRRCSADTSKRPSDS 816
SKPS T+ S+ S D+
Sbjct: 72 DDVNESSKPSR---TKAASSSNSAGGGDN 97
>UniRef50_Q5QLZ3 Cluster: Gastric mucin-like protein; n=4; Oryza
sativa|Rep: Gastric mucin-like protein - Oryza sativa
subsp. japonica (Rice)
Length = 579
Score = 33.1 bits (72), Expect = 8.9
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = +1
Query: 559 PEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQST 738
P ++ S S +I+S S N ++ + P K+ +T LSS+KP S
Sbjct: 73 PARSNSVSRPSIQSTLISSNNRSSVVNASISSVCSPPTTPSKRTST--LSSSKPSVPASR 130
Query: 739 RL*SKPSEPDPTRRCSADTSKRPS 810
++ ++PS P TR C+ RPS
Sbjct: 131 QVPTRPSTPTKTRPCT-PVKPRPS 153
>UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 752
Score = 33.1 bits (72), Expect = 8.9
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +3
Query: 267 KXGGTRTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLK 398
K R LK SF P + + ASS GRP K +R+R LK
Sbjct: 128 KEDHNREEELKAMVSFMPHRPAVDASSSGRPMKKDSKRMRNGLK 171
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 842,467,973
Number of Sequences: 1657284
Number of extensions: 17265474
Number of successful extensions: 52418
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 49761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52325
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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