Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_J14
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   3.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   5.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.0  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/35 (22%), Positives = 19/35 (54%)
 Frame = -1

Query: 201 MVQQSPSRLPLKAATKHIRMIMGTPIHPVLTRALG 97
           M+++SP+   ++  T+ I ++     HP +   +G
Sbjct: 484 MLKESPTSEEIRQFTQEINIMKSVRQHPYIVSLIG 518


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +2

Query: 146 LMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNPYAIIADQTLGK 280
           ++C + ++S KR G      E+ NP L +     +A + D  L +
Sbjct: 524 VLCYITSWSQKRPGAGKFTPEDINPSLCTHIIYAFATLKDHKLAE 568


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 341 TRPKLQRGLQ*SPWTRPRSRSCRE 270
           T  ++   L  SP  RP +R+CR+
Sbjct: 230 TSDRVHAALVTSPRARPLARTCRD 253


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = +1

Query: 571 LGCPRLYGFLPCFRHHHVCVWGCLNL 648
           L C     F+ C     V VW C NL
Sbjct: 218 LNCLCSLWFINCTAKGRVAVWMCNNL 243


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = +1

Query: 571 LGCPRLYGFLPCFRHHHVCVWGCLNL 648
           L C     F+ C     V VW C NL
Sbjct: 218 LNCLCSLWFINCTAKGRVAVWMCNNL 243


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -3

Query: 523 DAGNHRGSEGDYTSEGQILRAVKED 449
           D   ++ +E +YT   ++  +VKE+
Sbjct: 28  DCDKNQNTEHNYTHNNEMYHSVKEE 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,015
Number of Sequences: 336
Number of extensions: 3558
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)