Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J14
(663 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 9e-10
SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_43974| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_58414| Best HMM Match : Aa_trans (HMM E-Value=3.1e-35) 40 0.002
SB_27382| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_32782| Best HMM Match : Aa_trans (HMM E-Value=1.7e-40) 36 0.039
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 36 0.039
SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051
SB_50674| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_46723| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4) 33 0.16
SB_40988| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4) 33 0.16
SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 30 1.5
SB_3893| Best HMM Match : PaREP8 (HMM E-Value=2.4) 30 1.5
SB_43917| Best HMM Match : RCSD (HMM E-Value=2.4) 30 1.5
SB_18943| Best HMM Match : DUF753 (HMM E-Value=5.9) 30 1.9
SB_4115| Best HMM Match : Homeobox (HMM E-Value=9.4e-08) 30 1.9
SB_27407| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_48790| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_48711| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_59420| Best HMM Match : FlaG (HMM E-Value=1) 28 5.9
SB_8486| Best HMM Match : Granulin (HMM E-Value=0) 28 5.9
SB_42193| Best HMM Match : DUF1168 (HMM E-Value=0.4) 28 7.8
SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_8863| Best HMM Match : DAO (HMM E-Value=0.04) 28 7.8
SB_5415| Best HMM Match : ROK (HMM E-Value=1.2e-23) 28 7.8
SB_45559| Best HMM Match : FAD_Synth (HMM E-Value=1.8) 28 7.8
SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40) 28 7.8
SB_26428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0) 28 7.8
>SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 65.3 bits (152), Expect = 4e-11
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Frame = +2
Query: 41 GQTSMLIAG-----EMAGSG-VLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTI 202
GQ S ++AG + GSG VL +P A+ + G+ + +I+L+ L+ ++G L DC
Sbjct: 147 GQASGILAGWNIVNVIQGSGGVLGIPFAVSQGGFAALAVIVLVGLMTLYTGVVLIDCMYE 206
Query: 203 LEERNPQLRSRKRNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVV-YLLMAAQXXXXXX 379
+ ++ +LR R R YA IA G V+V + + VV ++++
Sbjct: 207 VSPKS-RLRKRVRGSYAEIAADAWGPVGGVIVDFMTVAFCYCTCVVLFMMLGNTVFSFLK 265
Query: 380 XXXXXXXXXXXWYLIVVGAMTPLIFFNSPKDLTFTGVIAFGSTVIACILYFIEMMNEVRP 559
YLI + PL+ + L + ++A S +I C+ FI + ++
Sbjct: 266 SFMTLGFGLNECYLICAALLVPLVLIHQLTVLAWLSMLAVLS-LITCL--FIIIGYSLQE 322
Query: 560 FVFRWGVHGFTDFFL-----AFGTIMFAFGGASTFPTI 658
+ W +H DF + A G I+F++ G S FP I
Sbjct: 323 WQ-SWKIHNIPDFDINNFPVAIGIIVFSYCGHSVFPGI 359
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 64.1 bits (149), Expect = 1e-10
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Frame = +2
Query: 59 IAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRK 238
++ + G+G+L +P A+ GW GV I+++ V F+GK L DC +R Q R R
Sbjct: 119 VSNLIQGTGILGVPYAVRMGGWAGVAAIVVVAWVCCFTGKLLVDCLYEESKRTGQ-RKRV 177
Query: 239 RNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAAQXXXXXXXXXXXXXXXXXWY 418
R Y + + T + +VS+ + ++G V+Y+++ A W
Sbjct: 178 RENYPDVGEATWPGWGNKIVSVVQVCEMYGGIVMYIVLLA-TIFYDMLKDFAPLDIYMWA 236
Query: 419 LIVVGAMTPLIFFNSPKD---LTFTGVIAFGSTVIACILYFIEMMNEVRPFVFRWGVHGF 589
+ PLIF ++ V A S ++A I+Y + R + V
Sbjct: 237 VACAVVALPLIFITRVSVIAWISMMSVFALLSGLLAIIIYCFTEFD--RMSLRNIPVFEP 294
Query: 590 TDFFLAFGTIMFAFGGASTFPTI 658
+ F + FG I+F++ + FP +
Sbjct: 295 STFPIGFGIIVFSYCAHAVFPGV 317
>SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1004
Score = 60.9 bits (141), Expect = 9e-10
Identities = 45/207 (21%), Positives = 87/207 (42%), Gaps = 3/207 (1%)
Frame = +2
Query: 47 TSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQL 226
+S + + G+G L +P ++ GW G+ I+++ V F+GK L +C E ++
Sbjct: 421 SSWNVTSMIQGTGTLGIPYSVRMGGWAGITTILILAWVCCFTGKLLIEC-LYSESKSTGK 479
Query: 227 RSRKRNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAAQXXXXXXXXXXXXXXX 406
R Y + K + +VS+ + +FG +++Y+++ A
Sbjct: 480 IKRVYTNYPELGGAVWPKFGNHLVSVIQVCEMFGGTIMYIVLLA-TLLTDLFTTCTPLRQ 538
Query: 407 XXWYLIVVGAMTPLIFFNSPKDLTFTGVI---AFGSTVIACILYFIEMMNEVRPFVFRWG 577
W +I PL F + + +I AF + I+Y I + + +
Sbjct: 539 QHWAVICTYIALPLAFVRRVSVIAWASMISVFAFTCALTTIIIYTITQYHHMS--IQNIP 596
Query: 578 VHGFTDFFLAFGTIMFAFGGASTFPTI 658
FT F + FG I+F++ + FP +
Sbjct: 597 AFDFTKFPVGFGIIVFSYTAHAVFPGV 623
>SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 51.2 bits (117), Expect = 7e-07
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 9/203 (4%)
Frame = +2
Query: 77 GSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNPYAI 256
G+G+LA+P + TG+ GV I+IL+ L+ ++GK L C L E P+ K YA
Sbjct: 41 GTGILAMPYVIRLTGYWGVAIVILVALLGNYTGKILIHC---LHENTPEGHFNKFT-YAD 96
Query: 257 IADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAAQXXXXXXXXXXXXXXXXXWYLIVVGA 436
+ + K ++V + F ++L+M W IV A
Sbjct: 97 LGEAFWPKYGRLMVHITNFFEQFSHCTLFLIMCG--TVMHHTFPDSGISESLWICIVSFA 154
Query: 437 MTPLIFFNSPKDLT----FTGVIAFGSTVIACILYFIEMMNEVRPFVFRWGVHGFTDF-- 598
+ P F + K ++ T +++ GS+ C+L + ++ W H T F
Sbjct: 155 VVPCAFVRTMKHISHISILTVIVSMGSS--TCVLGYSLYHHD------DWKTHNLTSFNF 206
Query: 599 ---FLAFGTIMFAFGGASTFPTI 658
+A G + F + P I
Sbjct: 207 RHMSIAMGIVTVTFSSTAYLPAI 229
>SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 46.8 bits (106), Expect = 2e-05
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 4/198 (2%)
Frame = +2
Query: 77 GSGVLALPRALVRTGWIGVPI-IILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNPYA 253
G G+L +P A VR G I + I ++ +V +G L DC + R+ Q + R R+ Y
Sbjct: 117 GMGILGIPYA-VREGGIAAAVCIFVVAIVCDVTGILLVDCLYEISPRS-QKKKRIRSNYP 174
Query: 254 IIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAAQXXXXXXXXXXXXXXXXXWYLIVVG 433
+ + VVS+ + L+ A+++YL++ W ++
Sbjct: 175 EVGEAVWPGIGGKVVSVVQTIELYTAAMLYLILLT-TMFSQITEKYISLSMNVWAVLCAV 233
Query: 434 AMTPLIFFNSPK---DLTFTGVIAFGSTVIACILYFIEMMNEVRPFVFRWGVHGFTDFFL 604
A+ P +F ++ V+A S++ + Y I +N R + F +
Sbjct: 234 AVLPSVFITRLSLIAWMSMIAVLALMSSIAVTLAYCI--LNYDRWSINNIPTFDGNTFPI 291
Query: 605 AFGTIMFAFGGASTFPTI 658
FG + F++ + FP I
Sbjct: 292 GFGIVTFSYCAHAVFPGI 309
>SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 42.3 bits (95), Expect = 3e-04
Identities = 40/177 (22%), Positives = 71/177 (40%), Gaps = 4/177 (2%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNPY 250
M G+G LALP A+ R G G IL+ ++ A++ DC E + + R R+
Sbjct: 889 MEGTGFLALPYAVSRGGIAGALGFILVPIILAYTAYISVDC--AYEGGKYKAKKRVRSSL 946
Query: 251 AIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAAQXXXXXXXXXXXXXXXXXWYLIVV 430
A I ++ + IV+LF + L+ + W +I+
Sbjct: 947 AEIGKAVWAPAEHIIDGL-FIVSLFDTLTSFNLVCS---SLLAGLQIPSISQRYWSVIIG 1002
Query: 431 GAMTPLIFFNSPKDLTFTGVIAFGSTVIACILYFIEMMNEVRPFVFR----WGVHGF 589
P +F + + L + ++ S ++A I + E + + FR W +GF
Sbjct: 1003 AVALPSLFIKTFRSLVWLSLLGTASLLLAFITVIVYEFREYKSWDFRALLFWDFNGF 1059
>SB_43974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/53 (30%), Positives = 33/53 (62%)
Frame = +2
Query: 35 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDC 193
S+ Q+ + +M G+G+L LP ++R GW V ++++ ++ ++GK L +C
Sbjct: 545 SMWQSVANLVSDMEGTGLLGLPYVILRGGWAAVMALVVVAFISYYTGKILVEC 597
>SB_58414| Best HMM Match : Aa_trans (HMM E-Value=3.1e-35)
Length = 436
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/177 (19%), Positives = 73/177 (41%), Gaps = 4/177 (2%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNPY 250
M GSG +ALP A+ R G G IL+ ++ ++ + DC + E + R R+ Y
Sbjct: 56 MEGSGFVALPYAVARGGLAGALGFILVPIIFTYTAHIMVDC--LYEGGRYTEKKRVRSSY 113
Query: 251 AIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAAQXXXXXXXXXXXXXXXXXWYLIVV 430
IA + +++ + + F Y L+++ W +I+
Sbjct: 114 EEIA-TAVWPPAGYMLNTLFVFSFFDHLTSYNLVSS-SLLAGLQTPGVDISQRYWSIIIG 171
Query: 431 GAMTPLIFFNSPKDLTFTGVIAFGSTVIACILYFIEMMNEVRPFVFR----WGVHGF 589
+ P +F + + + + ++A + ++A + + + + + F W + GF
Sbjct: 172 AVVLPTLFIKTFRSIAWLSLLATAALLLALLTVIVYDFHNYKSWDFNSLLFWDLQGF 228
>SB_27382| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 39.5 bits (88), Expect = 0.002
Identities = 38/167 (22%), Positives = 69/167 (41%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNPY 250
M G+G LALP A+ R G G + ++ A++ L +C + E ++ + R R Y
Sbjct: 1 MEGTGFLALPYAVARGGLAGALSFAFVGILMAYTSYLLIEC--VYEGKSTK-RKRVHTSY 57
Query: 251 AIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAAQXXXXXXXXXXXXXXXXXWYLIVV 430
IA Q VS+ +I+ YL++A+ W +
Sbjct: 58 RDIA-QAAWLPAGGTVSILLIINWLNLMTGYLVVAS-SLLVDVEIPGLILTQSSWAALAG 115
Query: 431 GAMTPLIFFNSPKDLTFTGVIAFGSTVIACILYFIEMMNEVRPFVFR 571
+ P +F S K + + I+ + +I+ I+ I ++ + FR
Sbjct: 116 VCVFPALFCKSLKSMAWVSCISNITLIISFIIVLISEVSNYAAWDFR 162
>SB_32782| Best HMM Match : Aa_trans (HMM E-Value=1.7e-40)
Length = 440
Score = 35.5 bits (78), Expect = 0.039
Identities = 32/153 (20%), Positives = 65/153 (42%)
Frame = +2
Query: 77 GSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNPYAI 256
G G+LALP AL + + ++++ +VA ++GK L +C L+ +R R+ N Y I
Sbjct: 56 GPGILALPFALSEGNGVALAALVVVPMVAFYTGKILIECLYDLKINGRIVRVRE-NYYGI 114
Query: 257 IADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAAQXXXXXXXXXXXXXXXXXWYLIVVGA 436
+ VVV+ ++ S+ +LM W +I+
Sbjct: 115 AREIWPRFGAHVVVASQLMSFCLLGSLYLVLMG---DLLKTSLPDLTLSTRQWMVIMACT 171
Query: 437 MTPLIFFNSPKDLTFTGVIAFGSTVIACILYFI 535
P F S + + +++ + +++ +L +
Sbjct: 172 GVPSSLFRSLAQVAWLSLLSIFALILSVVLVVV 204
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 35.5 bits (78), Expect = 0.039
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -3
Query: 625 KHDGAESKEEIRKAVDT---PTKHERTDFVHHLNKVQDAGNHRGSEGDYTSEGQILRAVK 455
KHD AE E + V+ PT H+ HHL + + S+ DY E + AV
Sbjct: 3006 KHDEAEEPERFGEEVEIVAIPTSHDE----HHLE--EGVADREASDSDYYEEEVDVAAVS 3059
Query: 454 EDKRSHGSDHDQ 419
+ HG D ++
Sbjct: 3060 NKEEQHGEDKEE 3071
>SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 35.1 bits (77), Expect = 0.051
Identities = 28/98 (28%), Positives = 47/98 (47%)
Frame = +2
Query: 59 IAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRK 238
+ M G GVL+LP A + G++ ++++ L+A+ G L I ++ Q R +
Sbjct: 239 LVSTMIGGGVLSLPFAFQQGGFVMSSLVLIFVLMASTHGGFL----IINSKKYCQGRIKN 294
Query: 239 RNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLM 352
IA G V+ + +IVTLF SV Y ++
Sbjct: 295 VEDVGRIA---FGYKGEVLTQLVLIVTLFLCSVAYWIL 329
>SB_50674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 44 QTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQ 223
Q + I+ + G+G L +P A+ + G++ + I+ + ++ ++GK + +C
Sbjct: 89 QAAWNISNLIQGTGTLGIPYAVSKGGYMALVAIVFIAVITNYTGKLIIECLYERPMNADG 148
Query: 224 LRSRK-RNPYAIIADQTL 274
R R+ R YA +A L
Sbjct: 149 KRGRRLRKSYAALAKPDL 166
>SB_46723| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4)
Length = 163
Score = 33.5 bits (73), Expect = 0.16
Identities = 29/108 (26%), Positives = 49/108 (45%)
Frame = +2
Query: 35 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEER 214
S + +M M G+G LALP A+ R G G + ++ A++ L +C + E +
Sbjct: 20 STWRVTMNTINYMEGTGFLALPYAVARGGLAGALSFAFVGILMAYTSYLLIEC--VYEGK 77
Query: 215 NPQLRSRKRNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAA 358
+ + R R Y IA Q VS+ +I+ YL++A+
Sbjct: 78 STK-RKRVHTSYRDIA-QAAWLPAGGTVSILLIINWLNLMTGYLVVAS 123
>SB_40988| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4)
Length = 178
Score = 33.5 bits (73), Expect = 0.16
Identities = 29/108 (26%), Positives = 49/108 (45%)
Frame = +2
Query: 35 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEER 214
S + +M M G+G LALP A+ R G G + ++ A++ L +C + E +
Sbjct: 35 STWRVTMNTINYMEGTGFLALPYAVARGGLAGALSFAFVGILMAYTSYLLIEC--VYEGK 92
Query: 215 NPQLRSRKRNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAA 358
+ + R R Y IA Q VS+ +I+ YL++A+
Sbjct: 93 STK-RKRVHTSYRDIA-QAAWLPAGGTVSILLIINWLNLMTGYLVVAS 138
>SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = -3
Query: 634 PKRKHDGAESKEEIRKAVDTPTKHERTDFVHHLNKVQDAGNHRGSEGDYTSEGQILRAVK 455
P+++HD + E R+ H R H + N+RG +Y + R +
Sbjct: 316 PRKRHDRGRGRLENREE----RGHHRAFAPDHA----EPDNYRGRGDEYRRRDEDYRGYR 367
Query: 454 EDKRSHGSDH 425
ED+R HG D+
Sbjct: 368 EDRREHGEDY 377
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +1
Query: 304 GDHCNPLWSFGRVPADGSSDHRTTPTHSDPNIDHLHLVPDRGRSHD--SSYLL*QP--*G 471
GDH P S RV D S DH ++ + + H P SHD Y + QP
Sbjct: 1672 GDHYIPGRSEERVFQDMSGDHTSSECYQQRYHNIYHSDPRMSLSHDFLCDYPMVQPYDVN 1731
Query: 472 SDLHWCNRLRIHGDC 516
+ +W +R+H DC
Sbjct: 1732 KEEYW-QFVRLHSDC 1745
>SB_3893| Best HMM Match : PaREP8 (HMM E-Value=2.4)
Length = 339
Score = 30.3 bits (65), Expect = 1.5
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Frame = -3
Query: 637 TPKRKHDGAESKEEIRKAVDTPTKHERTDFVHHL--NKVQDAGNHRGSEGDYTSEGQILR 464
T RK D ++KE K + P E +HH + +D G+HR +
Sbjct: 117 TDTRKKDKEKTKESCDKTTERPDSEEL--HLHHPRDHDRKDTGSHRQQHSESKRVETFPG 174
Query: 463 AVKED-----KRSHGSDHDQVPSANGQCWDQSE*ELFDDLSCHQQVHDRSSKEGYNDRHG 299
+ + + KR H H ++GQ DQ + E +D +R SK+G++D G
Sbjct: 175 SSRHEHSGSRKREHMESHRHSKHSHGQDKDQRK-ERIED--------ERRSKDGHHDL-G 224
Query: 298 HD 293
H+
Sbjct: 225 HE 226
>SB_43917| Best HMM Match : RCSD (HMM E-Value=2.4)
Length = 367
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = -3
Query: 313 NDRHGHDHAPGLAESLISNNSVWVPLPAPQLRIAFLQNGPAVTESLATEGRHQAHQNDNG 134
ND H G ES ++ PLP P R + ++G + E+ + + + +
Sbjct: 250 NDPSIFSHCVG-EESAKGERDIFTPLPPPNSRPSSTKSGQIIGENNMQDDKLVSPVEEEF 308
Query: 133 NTNPSSPDKGSRESQDS 83
NP++P+ S+E +
Sbjct: 309 PKNPTTPNLPSKEDNSN 325
>SB_18943| Best HMM Match : DUF753 (HMM E-Value=5.9)
Length = 676
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 247 IRYYC*SNSRQDL-ERGRVHGDHCNPLWSFGRVPADGSSD--HRTTPTHSDPNIDHL 408
+ Y+ + + D+ ER V +C+ LW+ GR+ DG D RT + D + HL
Sbjct: 158 LMYFSATRNPYDITERLEVDWTNCDILWTNGRLVIDGDFDLQTRTASKYDDRRVLHL 214
>SB_4115| Best HMM Match : Homeobox (HMM E-Value=9.4e-08)
Length = 267
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/81 (25%), Positives = 32/81 (39%)
Frame = -3
Query: 313 NDRHGHDHAPGLAESLISNNSVWVPLPAPQLRIAFLQNGPAVTESLATEGRHQAHQNDNG 134
N+ H H + ++ S W P P+ I + Q P ES T G H + + +
Sbjct: 191 NNLHQSHHEDSFLDQQFADQSPWQP--TPESCIEYTQ--PLPDESFKTTGSHDNNMSVDY 246
Query: 133 NTNPSSPDKGSRESQDSAACH 71
+ S G + SA CH
Sbjct: 247 SWLISMVTPGCYDISPSAGCH 267
>SB_27407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +2
Query: 35 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEER 214
S + +M M G+G LALP A+ R G G + ++ A++ L +C + E +
Sbjct: 35 STWRVTMNTINYMEGTGFLALPYAVARGGLAGALSFAFVGILMAYTSYLLIEC--VYEGK 92
Query: 215 NPQLRSRKRNPYAIIA 262
+ + R R Y IA
Sbjct: 93 STK-RKRVHTSYRDIA 107
>SB_48790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +1
Query: 268 NSRQDLERGRVHGDHCNPLWSFGRVPADGSSDHRTTPTHSDPNIDHLHLVPDRGR 432
NSR + R+ D L R+ D S R P HS DH +VPDR R
Sbjct: 47 NSRIIPDHSRIIPDRSRILPDHSRIIPDRS---RILPDHSQIIPDHSRIVPDRSR 98
>SB_48711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = -3
Query: 610 ESKEEIRKAVDTPTKH--ERTDFVHHLNKVQDAGNHRGSEGDY--TSEGQILRAVKE 452
++K + +KA +TP K E D ++ ++GN GSE D T++ + LR KE
Sbjct: 24 DTKFKTKKAKETPAKKYDEELDSDSDIHSDYESGNASGSESDVSETAQEKKLRLTKE 80
>SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +2
Query: 35 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEER 214
S + +M M G+G LALP A+ R G G + ++ A++ L +C + E +
Sbjct: 35 STWRVTMNTINYMEGTGFLALPYAVSRGGLAGALSFAFVGILMAYTSYLLIEC--VYEGK 92
Query: 215 NPQLRSRKRNPYAIIA 262
+ + R R Y IA
Sbjct: 93 STK-RKRVHTSYRDIA 107
>SB_59420| Best HMM Match : FlaG (HMM E-Value=1)
Length = 147
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -3
Query: 568 KHERTDFVHHLNKVQDAGNHRGSEGDYTSEGQILRAVKEDKRSHGSDHDQVPSAN 404
KH + + D NH + ++ Q LR +D RS ++D+ P+A+
Sbjct: 91 KHLVKELQEAIEYTNDVINHNSASEEFVDWQQALREQFKDLRSMSDEYDRSPNAH 145
>SB_8486| Best HMM Match : Granulin (HMM E-Value=0)
Length = 878
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -3
Query: 160 HQAHQNDNGNTNPSSPDKGSRESQDSAACHLSGDQH--TRLPNA 35
H QN N PDK S+ + C LS DQ+ LPNA
Sbjct: 183 HLRKQNKNILGTTVCPDKASKCPDGNTCCKLSSDQYGCCPLPNA 226
>SB_42193| Best HMM Match : DUF1168 (HMM E-Value=0.4)
Length = 425
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 343 VHDRSSKEGYNDRHGHDHAP-GLAESLISN 257
+HDR+S++ + DH P LA+ +ISN
Sbjct: 161 LHDRNSRDDLRSFNSRDHLPTSLADKVISN 190
>SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -3
Query: 235 PAPQLRIAFLQNGPAVTESLATEG---RHQAHQNDNGNTNPSSPDKGSRESQDSA 80
P P+L ++ PA+ + A G + + NDN T+ SSP + +S +++
Sbjct: 597 PQPELGVSVPAETPALPQKCAKVGSEYNNTSSVNDNSRTSTSSPAHNNTKSSNTS 651
>SB_8863| Best HMM Match : DAO (HMM E-Value=0.04)
Length = 485
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 504 DPKAITPVKVRSLGLLKKIRGVMAPTTIRYQVQMVNVGI 388
DP+ + V +RS+ L +RG+ A + + MV GI
Sbjct: 197 DPRKLQFVSLRSINLALSVRGISALAAVGCERPMVESGI 235
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 504 DPKAITPVKVRSLGLLKKIRGVMAPTTIRYQVQMVNVGI 388
DP+ + V +RS+ L +RG+ A + + MV GI
Sbjct: 283 DPRKLQFVSLRSINLALSVRGISALAAVGCERPMVESGI 321
>SB_5415| Best HMM Match : ROK (HMM E-Value=1.2e-23)
Length = 313
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 343 VHDRSSKEGYNDRHGHD-HAPGLAESLISNNSVWVPLPAPQLRIAFLQNGPAVTESLATE 167
V R+ KEG D +AP LAE + N+ +P+P P + ++ G V + E
Sbjct: 101 VFKRTLKEGTPIAFDTDVNAPALAEMAAALNTKTIPIPLP--TVIYITVGTGVGVGVTVE 158
Query: 166 G 164
G
Sbjct: 159 G 159
>SB_45559| Best HMM Match : FAD_Synth (HMM E-Value=1.8)
Length = 714
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 585 PWTPQRNTKGRTSFI 541
PWTP R +GR SF+
Sbjct: 594 PWTPNRTPRGRLSFV 608
>SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40)
Length = 933
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -3
Query: 262 SNNSVWVPLPAPQLRIAFLQNGPAVTES----LATEGRHQAHQNDNGNTNPSSPDKGSRE 95
SN S LP+ + L+N PAVTE + ++ N +T SSP + S
Sbjct: 597 SNGSTRDTLPSYDQALERLRNSPAVTEGAPQRFSWSQEDNKERSRNSSTIESSPKRFSWS 656
Query: 94 SQDS 83
+DS
Sbjct: 657 QEDS 660
>SB_26428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = +1
Query: 322 LWSFGRVPADGSSDHRTTPTHSDPNIDHLHLVPDRGRSHD 441
+W + P R+ P H D + +PDR +HD
Sbjct: 641 VWRRKKRPGSSGPKTRSQPNHYDTEGQEQYAIPDRRSAHD 680
>SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 689
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/57 (19%), Positives = 29/57 (50%)
Frame = -3
Query: 172 TEGRHQAHQNDNGNTNPSSPDKGSRESQDSAACHLSGDQHTRLPNAESAVLTTTVAI 2
+ + ++ N+N N+N +S + S ++ + + + ++ + +A TTTV +
Sbjct: 378 SNSNNNSNNNNNNNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSTVTATTTTTVTV 434
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,893,431
Number of Sequences: 59808
Number of extensions: 500335
Number of successful extensions: 1741
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1726
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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