Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J14
(663 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23810.1 68418.m02795 amino acid transporter family protein s... 49 2e-06
At5g02180.1 68418.m00139 amino acid transporter family protein b... 48 4e-06
At5g09220.1 68418.m01045 amino acid permease 2 (AAP2) identical ... 44 7e-05
At5g02170.1 68418.m00138 amino acid transporter family protein b... 44 1e-04
At3g54830.1 68416.m06074 amino acid transporter family protein b... 42 3e-04
At1g58360.1 68414.m06638 amino acid permease I (AAP1) identical ... 42 4e-04
At1g44100.1 68414.m05094 amino acid permease 5, putative (AAP5) ... 41 6e-04
At5g63850.1 68418.m08015 amino acid transporter 4, putative (AAP... 41 8e-04
At5g49630.1 68418.m06141 amino acid permease 6 (AAP6) identical ... 40 0.001
At1g10010.1 68414.m01129 amino acid permease, putative similar t... 40 0.001
At1g77380.1 68414.m09011 amino acid carrier, putative / amino ac... 40 0.001
At2g39130.1 68415.m04807 amino acid transporter family protein b... 40 0.002
At5g16740.1 68418.m01960 amino acid transporter family protein l... 39 0.003
At2g41190.1 68415.m05087 amino acid transporter family protein l... 39 0.003
At3g28960.1 68416.m03620 amino acid transporter family protein l... 39 0.003
At5g15240.1 68418.m01785 amino acid transporter family protein l... 38 0.008
At2g42005.1 68415.m05196 amino acid transporter family protein l... 38 0.008
At5g38820.1 68418.m04695 amino acid transporter family protein l... 36 0.018
At1g80510.1 68414.m09435 amino acid transporter family protein s... 36 0.032
At5g40780.2 68418.m04951 lysine and histidine specific transport... 34 0.097
At5g40780.1 68418.m04950 lysine and histidine specific transport... 34 0.097
At1g48640.1 68414.m05444 lysine and histidine specific transport... 34 0.097
At5g65990.1 68418.m08308 amino acid transporter family protein s... 33 0.13
At4g38250.1 68417.m05402 amino acid transporter family protein l... 33 0.13
At3g56200.1 68416.m06246 amino acid transporter family protein l... 33 0.13
At1g67640.1 68414.m07716 lysine and histidine specific transport... 33 0.13
At1g24400.1 68414.m03076 lysine and histidine specific transport... 33 0.17
At1g61270.1 68414.m06905 lysine and histidine specific transport... 32 0.30
At2g40420.1 68415.m04985 amino acid transporter family protein s... 32 0.39
At5g19500.1 68418.m02323 tryptophan/tyrosine permease family pro... 31 0.52
At3g01760.1 68416.m00114 lysine and histidine specific transport... 31 0.68
At3g11900.1 68416.m01459 amino acid transporter family protein l... 31 0.90
At1g71680.1 68414.m08271 lysine and histidine specific transport... 31 0.90
At3g15390.1 68416.m01951 expressed protein low similarity to PRL... 30 1.6
At4g01890.1 68417.m00247 glycoside hydrolase family 28 protein /... 29 3.6
At3g23920.1 68416.m03005 beta-amylase, putative / 1,4-alpha-D-gl... 29 3.6
At3g61790.1 68416.m06933 seven in absentia (SINA) family protein... 28 6.4
At2g45620.1 68415.m05672 nucleotidyltransferase family protein l... 28 6.4
At2g35540.1 68415.m04353 DNAJ heat shock N-terminal domain-conta... 28 6.4
At1g26210.1 68414.m03198 expressed protein similar to hypothetic... 28 6.4
At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contai... 28 6.4
At5g03415.1 68418.m00294 DPB-1 transcription factor, putative (D... 27 8.4
At4g11860.1 68417.m01887 expressed protein contains Pfam domain ... 27 8.4
At3g54930.1 68416.m06087 serine/threonine protein phosphatase 2A... 27 8.4
At1g72650.2 68414.m08402 myb family transcription factor contain... 27 8.4
At1g72650.1 68414.m08401 myb family transcription factor contain... 27 8.4
At1g62880.1 68414.m07100 cornichon family protein contains Pfam ... 27 8.4
>At5g23810.1 68418.m02795 amino acid transporter family protein
similar to amino acid carrier [Ricinus communis]
GI:3293031; contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 467
Score = 49.2 bits (112), Expect = 2e-06
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +2
Query: 56 LIAGEMAGSGVLALPRALVRTGWIGVPI-IILMCLVAAFSGKRLGDCWTILEERNPQLRS 232
+I G + G+GVL+L A GWI P +I V S L DC+ + N LR
Sbjct: 37 IITG-VIGAGVLSLAWATAELGWIAGPAALIAFAGVTLLSAFLLSDCYRFPDPNNGPLRL 95
Query: 233 RKRNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAA 358
N Y+ LGK +V + + ++LFG + Y ++ A
Sbjct: 96 ---NSYSQAVKLYLGKKNEIVCGVVVYISLFGCGIAYTIVIA 134
>At5g02180.1 68418.m00139 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 550
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/94 (25%), Positives = 50/94 (53%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNPY 250
+ G G++ +P A+ +GW+G+PI++ ++ ++G + C E +P +++ Y
Sbjct: 172 LCGLGLITMPYAIKESGWLGLPILLFFGVITCYTGVLMKRCL----ESSPGIQT-----Y 222
Query: 251 AIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLM 352
I G T ++S+ + V L+ A V Y++M
Sbjct: 223 PDIGQAAFGITGRFIISILLYVELYAACVEYIIM 256
>At5g09220.1 68418.m01045 amino acid permease 2 (AAP2) identical to
amine acid permease AAP2 [Arabidopsis thaliana]
GI:510236
Length = 493
Score = 44.4 bits (100), Expect = 7e-05
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = +2
Query: 35 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVP-IIILMCLVAAFSGKRLGDCWTILEE 211
+V S I + GSGVL+L A+ + GWI P +++L LV +S L DC+
Sbjct: 49 TVWTASAHIITAVIGSGVLSLAWAIAQLGWIAGPAVMLLFSLVTLYSSTLLSDCY----- 103
Query: 212 RNPQLRSRKRN-PYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAA 358
R S KRN Y LG + + + LFG ++ Y + A+
Sbjct: 104 RTGDAVSGKRNYTYMDAVRSILGGFKFKICGLIQYLNLFGIAIGYTIAAS 153
>At5g02170.1 68418.m00138 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 526
Score = 43.6 bits (98), Expect = 1e-04
Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 7/203 (3%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNPY 250
+ G +L +P A+ GW+G+ I+ ++ ++G L C E +P + + Y
Sbjct: 148 LCGVALLTMPYAVKEGGWLGLFILFSFGIITFYTGILLKRCL----ENSPGIHT-----Y 198
Query: 251 AIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAAQXXXXXXXXXXXXXXXXXWYLIVV 430
I G T ++VS+ + V L+ + V Y++M + V
Sbjct: 199 PDIGQAAFGTTGRILVSILLYVELYASCVEYIIMMSDNLSRMFPNTSLYINGFSLDSTQV 258
Query: 431 GAMTPLIFFNSP---KDLTFTGVIAFG----STVIACILYFIEMMNEVRPFVFRWGVHGF 589
A+T + KDL+ ++ G S ++A L++ ++ V F
Sbjct: 259 FAITTTLIVLPTVWLKDLSLLSYLSAGGVISSILLALCLFWAGSVDGVG-FHISGQALDI 317
Query: 590 TDFFLAFGTIMFAFGGASTFPTI 658
T+ +A G F FG S FP I
Sbjct: 318 TNIPVAIGIYGFGFGSHSVFPNI 340
>At3g54830.1 68416.m06074 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 546
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/106 (24%), Positives = 52/106 (49%)
Frame = +2
Query: 35 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEER 214
S GQ + + G G+L+ P A+ GW+G+ I+ ++ ++G L C +
Sbjct: 151 SFGQAVLNGVNVLCGVGILSTPYAVKEGGWLGLIILFAFGILCFYTGLLLRYCL----DS 206
Query: 215 NPQLRSRKRNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLM 352
+P +++ Y I G T ++VS+ + + L+ SV Y+++
Sbjct: 207 HPDVQT-----YPDIGHAAFGSTGRILVSVILYMELYAMSVEYIIL 247
>At1g58360.1 68414.m06638 amino acid permease I (AAP1) identical to
amino acid permease I GI:22641 from [Arabidopsis
thaliana]
Length = 485
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +2
Query: 77 GSGVLALPRALVRTGWI-GVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRN-PY 250
GSGVL+L A+ + GWI G I+++ + F+ L DC+ R P + KRN Y
Sbjct: 54 GSGVLSLAWAIAQLGWIAGTSILLIFSFITYFTSTMLADCY-----RAPDPVTGKRNYTY 108
Query: 251 AIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAA 358
+ LG + +A L G +V Y + A+
Sbjct: 109 MDVVRSYLGGRKVQLCGVAQYGNLIGVTVGYTITAS 144
>At1g44100.1 68414.m05094 amino acid permease 5, putative (AAP5)
nearly identical to amino acid permease (AAP5) GI:608673
from [Arabidopsis thaliana]
Length = 480
Score = 41.1 bits (92), Expect = 6e-04
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = +2
Query: 35 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPI-IILMCLVAAFSGKRLGDCWTILEE 211
+V S I + GSGVL+L A+ + GWIG P+ ++L V ++ L C+
Sbjct: 31 TVWTASAHIITAVIGSGVLSLAWAVAQIGWIGGPVAMLLFSFVTFYTSTLLCSCY----- 85
Query: 212 RNPQLRSRKRN-PYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAA 358
R+ + KRN Y LG V + V LFG ++ Y + +A
Sbjct: 86 RSGDSVTGKRNYTYMDAIHSNLGGIKVKVCGVVQYVNLFGTAIGYTIASA 135
>At5g63850.1 68418.m08015 amino acid transporter 4, putative (AAP4)
identical to amino acid transporter GI:608671 from
[Arabidopsis thaliana];
Length = 466
Score = 40.7 bits (91), Expect = 8e-04
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Frame = +2
Query: 35 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVP-IIILMCLVAAFSGKRLGDCWTILEE 211
+V S I + GSGVL+L A+ + GWI P +++L V +S L DC+
Sbjct: 22 TVWTASAHIITAVIGSGVLSLAWAIGQLGWIAGPTVMLLFSFVTYYSSTLLSDCY----- 76
Query: 212 RNPQLRSRKRN-PYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAA 358
R S KRN Y LG + + + LFG +V Y + A+
Sbjct: 77 RTGDPVSGKRNYTYMDAVRSILGGFRFKICGLIQYLNLFGITVGYTIAAS 126
>At5g49630.1 68418.m06141 amino acid permease 6 (AAP6) identical to
amino acid permease 6 (AAP6) [Arabidopsis thaliana]
GI:1769887
Length = 481
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +2
Query: 77 GSGVLALPRALVRTGWIGVPIIIL-MCLVAAFSGKRLGDCWTILEERNPQLRSRKRN-PY 250
GSGVL+L A+ + GW+ P +++ + F+ L DC+ R+P + KRN Y
Sbjct: 50 GSGVLSLAWAIAQLGWVAGPAVLMAFSFITYFTSTMLADCY-----RSPDPVTGKRNYTY 104
Query: 251 AIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAA 358
+ LG + +A L G ++ Y + A+
Sbjct: 105 MEVVRSYLGGRKVQLCGLAQYGNLIGITIGYTITAS 140
>At1g10010.1 68414.m01129 amino acid permease, putative similar to
amino acid permease I GI:22641 from [Arabidopsis
thaliana]; GC splice site at position 1256 is predicted
from alignment and not confirmed experimentally
Length = 475
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = +2
Query: 77 GSGVLALPRALVRTGWI-GVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRN-PY 250
GSGVL+L A+ + GW+ G +++ ++ ++ L DC+ R+P + RN Y
Sbjct: 45 GSGVLSLAWAIAQLGWVAGTTVLVAFAIITYYTSTLLADCY-----RSPDSITGTRNYNY 99
Query: 251 AIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAA 358
+ LG + +A V L G ++ Y + A+
Sbjct: 100 MGVVRSYLGGKKVQLCGVAQYVNLVGVTIGYTITAS 135
>At1g77380.1 68414.m09011 amino acid carrier, putative / amino acid
permease, putative strong similarity to amino acid
carrier GI:3293031 from [Ricinus communis]; contains
Pfam profile PF01490: Transmembrane amino acid
transporter protein; identical to cDNA AAP3 (Amino Acid
Permease) GI:3970651
Length = 476
Score = 39.9 bits (89), Expect = 0.001
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Frame = +2
Query: 35 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILM-CLVAAFSGKRLGDCWTILEE 211
SV S I + GSGVL+L A + GW+ P+++L+ V F+ L C+
Sbjct: 33 SVWTASAHIITAVIGSGVLSLAWATAQLGWLAGPVVMLLFSAVTYFTSSLLAACY----- 87
Query: 212 RNPQLRSRKRN-PYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAA 358
R+ S KRN Y LG + + + +FG ++ Y + +A
Sbjct: 88 RSGDPISGKRNYTYMDAVRSNLGGVKVTLCGIVQYLNIFGVAIGYTIASA 137
>At2g39130.1 68415.m04807 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 550
Score = 39.5 bits (88), Expect = 0.002
Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 9/217 (4%)
Frame = +2
Query: 35 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEER 214
S GQ + + G G+L+ P A GW+G+ I+ + L++ ++G L C L+
Sbjct: 161 SYGQAVLNGLNVLCGVGILSTPYAAKEGGWLGLMILFVYGLLSFYTGILLRYC---LDSE 217
Query: 215 NPQLRSRKRNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAAQ------XXXXX 376
+ Y I G T + VS+ + + L+ V Y+++ +
Sbjct: 218 S------DLETYPDIGQAAFGTTGRIFVSIVLYLELYACCVEYIILESDNLSSLYPNAAL 271
Query: 377 XXXXXXXXXXXXWYLIVVGAMTPLIFFNSPKDLTFT---GVIAFGSTVIACILYFIEMMN 547
+ L+ A+ P ++ L++ GVIA S ++ L++I +++
Sbjct: 272 SIGGFQLDARHLFALLTTLAVLPTVWLRDLSVLSYISAGGVIA--SVLVVLCLFWIGLVD 329
Query: 548 EVRPFVFRWGVHGFTDFFLAFGTIMFAFGGASTFPTI 658
EV + + +A G + + G + FP I
Sbjct: 330 EV-GIHSKGTTLNLSTLPVAIGLYGYCYSGHAVFPNI 365
>At5g16740.1 68418.m01960 amino acid transporter family protein low
similarity to lysosomal amino acid transporter 1 [Rattus
norvegicus] GI:14571904; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 426
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/97 (25%), Positives = 48/97 (49%)
Frame = +2
Query: 59 IAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRK 238
+ G + G G L++P A+ GW+ + ++I ++ ++ LG C RNP+ +S
Sbjct: 42 MVGMLIGLGQLSMPYAVESGGWMSIFLLISFGILTTYTSHILGKC----IRRNPKSKS-- 95
Query: 239 RNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLL 349
Y+ I G+ ++V + I + +F A V Y +
Sbjct: 96 ---YSDIGYSAFGRHGRLIVCLFIYLEIFMALVSYTI 129
>At2g41190.1 68415.m05087 amino acid transporter family protein low
similarity to vesicular GABA transporter [Rattus
norvegicus] GI:2587061; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 536
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/106 (22%), Positives = 48/106 (45%)
Frame = +2
Query: 35 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEER 214
SV QT MAG G+L+ P + GW + I++L ++ ++ + DC+ E +
Sbjct: 148 SVIQTIFNAINVMAGVGLLSTPYTVKEAGWASMVILLLFAVICCYTATLMKDCF---ENK 204
Query: 215 NPQLRSRKRNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLM 352
+ Y I + GK +++ M + L+ V ++++
Sbjct: 205 TGII------TYPDIGEAAFGKYGRILICMLLYTELYSYCVEFIIL 244
>At3g28960.1 68416.m03620 amino acid transporter family protein low
similarity to vesicular inhibitory amino acid
transporter [Mus musculus] GI:2826776; contains
INTERPRO:IPR002422 amino acid/polyamine transporter,
family II
Length = 405
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/94 (20%), Positives = 48/94 (51%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNPY 250
++G G+L++P +L R GW+ + +++L+ + A ++ + C R Y
Sbjct: 29 LSGIGILSVPYSLARGGWLSLSLLLLLAVTAFYTSLLITKCMN---------ADRNIKTY 79
Query: 251 AIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLM 352
I ++ G+ ++VS+ + + L+ + +L++
Sbjct: 80 PDIGERAFGRPGRIIVSVFMHLELYLVTTGFLIL 113
>At5g15240.1 68418.m01785 amino acid transporter family protein low
similarity to amino acid transporter system A3 [Homo
sapiens] GI:13876616; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 423
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNPY 250
++G G+L++P AL GW+ + I+ + + + + C E +P LRS Y
Sbjct: 46 LSGVGILSVPYALASGGWLSLIILFTVAITTFYCAILIKRCM----EMDPLLRS-----Y 96
Query: 251 AIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLM 352
I + G T V+VS+ + + L+ + +L++
Sbjct: 97 PDIGYKAFGNTGRVIVSIFMNLELYLVATSFLIL 130
>At2g42005.1 68415.m05196 amino acid transporter family protein low
similarity to proton/amino acid transporter 1 [Mus
musculus] GI:21908024; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 413
Score = 37.5 bits (83), Expect = 0.008
Identities = 52/205 (25%), Positives = 78/205 (38%), Gaps = 16/205 (7%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFS-GKRLGDCWTILEERNPQLRSRKRNP 247
+ G+GVL LP A RTGW LM L+ FS + C +L +L
Sbjct: 36 IVGAGVLGLPYAFKRTGW-------LMGLLTLFSVAALINHCMMLLVHIRRKLGVSNIGS 88
Query: 248 YAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAAQXXXXXXXXXXXXXXXXXWYLIV 427
+ + G VV + II++ G V YL+ +L+
Sbjct: 89 FGDLGFAACGNLGRFVVDILIILSQAGFCVGYLIFIGNTLANLSKPTKSTTLMSLRHLMG 148
Query: 428 VGAMTPLIF--------FNSPKDLT-------FTGVIAFGSTVIACILYFIEMMNEVRPF 562
V + I+ NS K LT F V+ G+ + I+ I++ RP
Sbjct: 149 VSPKSLYIWGCFPFQLGLNSIKTLTHLAPLSIFADVVDLGAMAVV-IVEDIKITVVQRPQ 207
Query: 563 VFRWGVHGFTDFFLAFGTIMFAFGG 637
V +G G + FF G ++AF G
Sbjct: 208 VVAFG--GMSVFFYGMGVAVYAFEG 230
>At5g38820.1 68418.m04695 amino acid transporter family protein low
similarity to N system amino acids transporter NAT-1
[Mus musculus] GI:7406950; contains Pfam profile
PF01490: Transmembrane amino acid transporter protein
Length = 456
Score = 36.3 bits (80), Expect = 0.018
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +2
Query: 59 IAGEMAGSGVLALPRALVRTGWI-GVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSR 235
+A + G+G++ALP + G I G+ II+LM + S + L I +R+
Sbjct: 44 LATTIIGAGIMALPATMKILGLIPGITIIVLMAFLTDASIEFLLRFSNIGNQRS------ 97
Query: 236 KRNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLM 352
Y + D + GK +++ ++I+V+ G +VY+++
Sbjct: 98 ----YGGVMDDSFGKCGRIMLQVSILVSNIGVLIVYMII 132
>At1g80510.1 68414.m09435 amino acid transporter family protein
similar to amino acid transporter system N2 [Rattus
norvegicus] GI:14578932; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 489
Score = 35.5 bits (78), Expect = 0.032
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +2
Query: 77 GSGVLALPRALVRTGWI-GVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNPYA 253
G+G++ALP + G + G +IILM L++ S + L +++L K Y
Sbjct: 90 GAGIMALPATMKVLGLVLGFVLIILMALLSEISVELLVR-FSVLY---------KSKSYG 139
Query: 254 IIADQTLGKTWSVVVSMAIIVTLFGASVVYLLM 352
+ LGKT V+ + IIV G VVYL++
Sbjct: 140 EVVQFALGKTARVLSEICIIVNNGGVLVVYLII 172
>At5g40780.2 68418.m04951 lysine and histidine specific transporter,
putative strong similarity to lysine and histidine
specific transporter GI:2576361 from [Arabidopsis
thaliana]; contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 445
Score = 33.9 bits (74), Expect = 0.097
Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNP 247
M G+GVL LP A+ + GW G+ +++L ++ ++ W ++ E + + ++ +
Sbjct: 48 MVGAGVLGLPYAMSQLGWGPGIAVLVLSWVITLYT------LWQMV-EMHEMVPGKRFDR 100
Query: 248 YAIIADQTLGKTWS--VVVSMAIIVTLFGASVVYLL 349
Y + G+ +VV +IV + G +VY++
Sbjct: 101 YHELGQHAFGEKLGLYIVVPQQLIVEI-GVCIVYMV 135
>At5g40780.1 68418.m04950 lysine and histidine specific transporter,
putative strong similarity to lysine and histidine
specific transporter GI:2576361 from [Arabidopsis
thaliana]; contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 446
Score = 33.9 bits (74), Expect = 0.097
Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNP 247
M G+GVL LP A+ + GW G+ +++L ++ ++ W ++ E + + ++ +
Sbjct: 49 MVGAGVLGLPYAMSQLGWGPGIAVLVLSWVITLYT------LWQMV-EMHEMVPGKRFDR 101
Query: 248 YAIIADQTLGKTWS--VVVSMAIIVTLFGASVVYLL 349
Y + G+ +VV +IV + G +VY++
Sbjct: 102 YHELGQHAFGEKLGLYIVVPQQLIVEI-GVCIVYMV 136
>At1g48640.1 68414.m05444 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GI:2576361 from [Arabidopsis thaliana];
contains Pfam profile PF01490: Transmembrane amino acid
transporter protein
Length = 453
Score = 33.9 bits (74), Expect = 0.097
Identities = 41/201 (20%), Positives = 83/201 (41%), Gaps = 12/201 (5%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNP 247
M G+GVL LP + + GW G+ ++IL ++ ++ W ++ E + + ++ +
Sbjct: 56 MVGAGVLGLPFFMAQLGWGPGIAVLILSWIITLYT------LWQMV-EMHEMVPGKRFDR 108
Query: 248 YAIIADQTLGKTWS--VVVSMAIIVTLFGASVVYLLMAAQXXXXXXXXXXXXXXXXXW-Y 418
Y + G+ ++V IIV + G +VY++ Q +
Sbjct: 109 YHELGQFAFGERLGLYIIVPQQIIVEV-GVCIVYMVTGGQSLKKFHEIACQDCSPIRLSF 167
Query: 419 LIVVGAMTPLIFFNSPKDLTFTG------VIAFGSTVIACILYFIEMMNEVRPFVFRWGV 580
I++ A + + + P + +G V++ + IA + + E + ++ G
Sbjct: 168 FIMIFASSHFVLSHLPNFNSISGVSLVAAVMSLSYSTIAWTATAAKGVQEDVQYGYKSGT 227
Query: 581 HGFT--DFFLAFGTIMFAFGG 637
T FF G I FA+ G
Sbjct: 228 TASTVLSFFTGLGGIAFAYAG 248
>At5g65990.1 68418.m08308 amino acid transporter family protein
similar to proton/amino acid transporter 1 [Mus
musculus] GI:21908024; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 427
Score = 33.5 bits (73), Expect = 0.13
Identities = 41/198 (20%), Positives = 71/198 (35%), Gaps = 9/198 (4%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRS----RK 238
+ G+GVL LP +TGW +L L F C +L +L S
Sbjct: 51 IVGAGVLGLPYTFKKTGW------LLGLLTLLFVSSLTFFCMMLLVHTRRKLESLSGFNS 104
Query: 239 RNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAAQXXXXXXXXXXXXXXXXXWY 418
+ + + G +VV + ++++ G V YL+ A
Sbjct: 105 ITSFGDLGESVCGPAGRLVVDVMLVLSQSGFCVSYLIFVATTMANLLSRGTEHILGLDAA 164
Query: 419 LIVVGAMTPL-IFFNSPKDLTFTGVIAFGSTVIACILYFIEMMNEVRPFVFRWG----VH 583
I + P + NS LT ++ + ++ + M+ +V F+ R
Sbjct: 165 SIYLWGCFPFQLGLNSIPSLTHLAPLSIFADIVDVAATLVVMVQDVFIFLKRRPPLRVFG 224
Query: 584 GFTDFFLAFGTIMFAFGG 637
G + FF G ++AF G
Sbjct: 225 GVSVFFYGLGVAVYAFEG 242
>At4g38250.1 68417.m05402 amino acid transporter family protein low
similarity to lysosomal amino acid transporter 1 [Rattus
norvegicus] GI:14571904; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 436
Score = 33.5 bits (73), Expect = 0.13
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGWI-GVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNP 247
+ G+GVL LP A RTGW+ GV +++ + ++ L L+ N + K
Sbjct: 47 VVGAGVLGLPYAFKRTGWLMGVLLLVSVSVLTHHCMMLLVYTRRKLDSFNAGI--SKIGS 104
Query: 248 YAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLL 349
+ + G +VV + II++ G V YL+
Sbjct: 105 FGDLGFAVCGSLGRIVVDLFIILSQAGFCVGYLI 138
>At3g56200.1 68416.m06246 amino acid transporter family protein low
similarity to N system amino acids transporter NAT-1
[Mus musculus] GI:7406950; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 435
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/98 (21%), Positives = 48/98 (48%)
Frame = +2
Query: 59 IAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRK 238
++ + G+G++++P A G VP +++ ++A S +G + +
Sbjct: 32 VSTSIIGAGIMSMPAAFKVLGI--VPAFLIITIIAWLSTISVGFLMK-------STLAGE 82
Query: 239 RNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLM 352
YA + ++ GKT S+ V +A +V FG +++ ++
Sbjct: 83 STTYAGVMKESFGKTGSIAVQIATMVATFGCMIIFSII 120
>At1g67640.1 68414.m07716 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GB:AAC49885 GI:2576361 (Arabidopsis
thaliana); contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 441
Score = 33.5 bits (73), Expect = 0.13
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNP 247
M G+GVL+LP A+ GW GV I+I+ L+ ++ W ++ + + + ++ +
Sbjct: 44 MVGAGVLSLPYAMSNLGWGPGVTIMIMSWLITFYT------LWQMV-QMHEMVPGKRFDR 96
Query: 248 YAIIADQTLGK---TWSVVVSMAIIVTLFGASVVYLL 349
Y + G+ W +VV +IV + G +VY++
Sbjct: 97 YHELGQHAFGEKLGLW-IVVPQQLIVEV-GVDIVYMV 131
>At1g24400.1 68414.m03076 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GI:2576361 from [Arabidopsis thaliana];
contains Pfam profile PF01490: Transmembrane amino acid
transporter protein
Length = 441
Score = 33.1 bits (72), Expect = 0.17
Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNP 247
M G+GVL+LP A+ GW GV I+++ ++ ++ W ++ E + + ++ +
Sbjct: 44 MVGAGVLSLPYAMSNLGWGPGVTIMVMSWIITLYT------LWQMV-EMHEIVPGKRLDR 96
Query: 248 YAIIADQTLGK---TWSVVVSMAIIVTLFGASVVYLL 349
Y + G+ W +VV +IV + G +VY++
Sbjct: 97 YHELGQHAFGEKLGLW-IVVPQQLIVEV-GVDIVYMV 131
>At1g61270.1 68414.m06905 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GI:2576361 from [Arabidopsis thaliana];
contains Pfam profile PF01490: Transmembrane amino acid
transporter protein
Length = 451
Score = 32.3 bits (70), Expect = 0.30
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNP 247
+ G+GVL LP A+ GW GV ++IL ++ ++ W ++ E + ++ +
Sbjct: 49 IVGAGVLGLPYAMSELGWGPGVVVLILSWVITLYT------FWQMI-EMHEMFEGKRFDR 101
Query: 248 YAIIADQTLGKTWS--VVVSMAIIVTLFGASVVYLLMAAQ 361
Y + GK +VV + ++V A +VY++ +
Sbjct: 102 YHELGQAAFGKKLGLYIVVPLQLLVET-SACIVYMVTGGE 140
>At2g40420.1 68415.m04985 amino acid transporter family protein
similar to neuronal glutamine transporter [Rattus
norvegicus] GI:6978016; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 440
Score = 31.9 bits (69), Expect = 0.39
Identities = 22/98 (22%), Positives = 51/98 (52%)
Frame = +2
Query: 59 IAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRK 238
I+ + G+G++A+P A G I P + ++ ++A S G L + + + +
Sbjct: 33 ISTSIVGAGIMAIPAAFKVLGVI--PSLSIIVIIAWLSNVSAG----FLMKSS---LAGE 83
Query: 239 RNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLM 352
YA + ++ GK+ +V V++ +V FG+ +++ ++
Sbjct: 84 STTYAGVMKESFGKSGAVAVTVVTMVVTFGSMIIFSII 121
>At5g19500.1 68418.m02323 tryptophan/tyrosine permease family
protein contains Pfam profile PF03222:
Tryptophan/tyrosine permease family
Length = 505
Score = 31.5 bits (68), Expect = 0.52
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +2
Query: 35 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMC 154
S+ L+AG G+G+LA+P +G++ + ++C
Sbjct: 109 SLSSAIFLVAGTTVGAGILAIPAVTQESGFLASAVACILC 148
>At3g01760.1 68416.m00114 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter [Arabidopsis thaliana] GI:2576361; contains
Pfam profile PF01490: Transmembrane amino acid
transporter protein
Length = 479
Score = 31.1 bits (67), Expect = 0.68
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNP 247
+ G+GVL LP A+ GW GV ++IL ++ ++ W ++ E + ++ +
Sbjct: 71 IVGAGVLGLPYAMSELGWGPGVVVLILSWVITLYT------LWQMI-EMHEMFEGQRFDR 123
Query: 248 YAIIADQTLGKTWS--VVVSMAIIVTLFGASVVYLL 349
Y + GK ++V + ++V + +VY++
Sbjct: 124 YHELGQAAFGKKLGLYIIVPLQLLVEI-SVCIVYMV 158
>At3g11900.1 68416.m01459 amino acid transporter family protein low
similarity to proton/amino acid transporter 1 [Mus
musculus] GI:21908024; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 432
Score = 30.7 bits (66), Expect = 0.90
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Frame = +2
Query: 44 QTSMLIAGEMAGSGVLALPRALVRTGWIGVPI-IILMCLVAAFSGKRLGDCWTILEERNP 220
QT I + G+GVL LP A GW+ + +I++ + L C LE
Sbjct: 35 QTLGNIIVSIVGTGVLGLPYAFRIAGWLAGSLGVIIVGFATYYCMLLLIQCRDKLESEEG 94
Query: 221 QLRSRKRNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLL 349
+ S+ Y + + +G + I G SV YL+
Sbjct: 95 EEESK---TYGDLGFKCMGTKGRYLTEFLIFTAQCGGSVAYLV 134
>At1g71680.1 68414.m08271 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GB: AAC49885 GI:2576361 from (Arabidopsis
thaliana); contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 434
Score = 30.7 bits (66), Expect = 0.90
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 16/207 (7%)
Frame = +2
Query: 71 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNP 247
M G+GVL LP A+ + GW G+ II+ + +S W ++ + + + ++ +
Sbjct: 52 MVGAGVLGLPFAMSQLGWGPGLVAIIMSWAITFYS------LWQMV-QLHEAVPGKRLDR 104
Query: 248 YAIIADQTLGKT--WSVVVSMAIIVTLFGASVVYLLMAAQXXXXXXXXXXXXXXXXXWYL 421
Y + + G + +V+ ++V + + +VY + +
Sbjct: 105 YPELGQEAFGPKLGYWIVMPQQLLVQI-ASDIVYNVTGGKSLKKFVELLFPNLEHIRQTY 163
Query: 422 IVVG-AMTPLIF-----FNSPKDLT-FTGVIAFGSTVIACILYFIEMMNEVRPFVFRWGV 580
++G A L+ FNS K ++ +++F ++IA + I E RP + GV
Sbjct: 164 YILGFAALQLVLSQSPDFNSIKIVSLLAALMSFLYSMIASVA-SIAKGTEHRPSTY--GV 220
Query: 581 HGFT------DFFLAFGTIMFAFGGAS 643
G T D F GTI FAF G S
Sbjct: 221 RGDTVASMVFDAFNGIGTIAFAFAGHS 247
>At3g15390.1 68416.m01951 expressed protein low similarity to
PRLI-interacting factor N [Arabidopsis thaliana]
GI:11139276
Length = 468
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = -1
Query: 615 VPKARKKSVKPWTPQRN--TKGRTSFIISIKY-KMQAITVDPKAIT-PVKVRS 469
VP+ K W P+RN + G S +I +Y + + I+ PK T P+K+ S
Sbjct: 82 VPRQEDSKAKVWRPKRNSISNGTVSSVIGKEYARTRPISNAPKEATKPLKINS 134
>At4g01890.1 68417.m00247 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Lycopersicon esculentum] GI:7381227;
contains PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 468
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 181 SLATEGR--HQAHQNDNGNTNPSSPDKGSRESQD 86
S TE R HQA Q + + NP+ P K SQD
Sbjct: 25 SYGTEARLHHQASQPPSPSPNPNDPSKSPSRSQD 58
>At3g23920.1 68416.m03005 beta-amylase, putative /
1,4-alpha-D-glucan maltohydrolase, putative similar to
beta-amylase enzyme [Arabidopsis thaliana] GI:6065749,
beta-amylase PCT-BMYI from [Solanum tuberosum]; contains
Pfam profile PF01373: Glycosyl hydrolase family 14
Length = 575
Score = 28.7 bits (61), Expect = 3.6
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
Frame = -1
Query: 639 APPNANMMVPKARKKSVK-----PWTPQRNTKGRTSFIISIKYKMQAITVDPKAITPVKV 475
+PP+A MM PKA ++ K P P G T +S+ K A+ I +
Sbjct: 31 SPPSARMMTPKAMNRNYKAHGTDPSPPMSPILGATRADLSVACKAFAVENGIGTIEEQRT 90
Query: 474 RSLGLL--KKIRGVMAPTTIRYQVQMVNVGIRVSRSCSM 364
G + KK G P + + V +G V+R +M
Sbjct: 91 YREGGIGGKKEGGGGVPVFVMMPLDSVTMGNTVNRRKAM 129
>At3g61790.1 68416.m06933 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 326
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 514 CLHLVLY*DDERSPSFRVSLGCPRLYGFLPCFRHHHVC 627
CL L + P +SLGCP ++ + +H VC
Sbjct: 107 CLALEKVAESLELPCKHMSLGCPEIFPYYSKLKHETVC 144
>At2g45620.1 68415.m05672 nucleotidyltransferase family protein low
similarity to SP|O13833| Caffeine-induced death protein
1 {Schizosaccharomyces pombe}; contains Pfam profiles
PF03828: PAP/25A associated domain, PF01909:
Nucleotidyltransferase domain
Length = 764
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 457 KEDKRSHGSDHDQVPSANGQCWDQS 383
K+D R G +HDQ + + W+QS
Sbjct: 259 KDDDRGMGRNHDQAMGEHSKVWNQS 283
>At2g35540.1 68415.m04353 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226:
DnaJ domain
Length = 575
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 185 GDCWTILEERNPQLRSRKRNPYAIIADQTL 274
G W + E NP L+ RK Y I+ T+
Sbjct: 465 GSVWAVYSETNPGLQRRKTRRYEIVVCLTM 494
>At1g26210.1 68414.m03198 expressed protein similar to hypothetical
protein GI:6524175 from [Arabidopsis thaliana]
Length = 148
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 151 HQNDNGNTNPSSPDKGSRESQDSAACHLSGDQHTRLP 41
++ND+G+T S D G ES DS A S +LP
Sbjct: 56 YENDDGDT---SDDGGDEESDDSMASDASSGPSNQLP 89
>At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contains
aminoacyl-transfer RNA synthetases class-II signature 1,
PROSITE:PS00179
Length = 766
Score = 27.9 bits (59), Expect = 6.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = -3
Query: 574 PTKHERTDFVHHL--NKVQDAGNHRGSEGDYTSEGQILRAVKEDKRSHGSDHDQVPSANG 401
P ++ TDFV + N+V+ + G+ + + L+ K+ K S GS+ D+
Sbjct: 512 PQRYSATDFVETVSDNEVEFQSDD-DIYGEAVYDEEYLKKRKQKKLSSGSEGDEEKGDEE 570
Query: 400 QCWDQSE*ELFDDLSCHQQVHDRSSKEGYND 308
WD+ E ++ ++ S+ E +D
Sbjct: 571 YKWDEDNAEYEEEEEEEEEEDSLSASEEDSD 601
>At5g03415.1 68418.m00294 DPB-1 transcription factor, putative (DPB)
similar to Swiss-Prot:Q14186 transcription factor DP-1
[Homo sapiens]; contains Pfam profile PF02319:
Transcription factor E2F/dimerisation partner (TDP)
Length = 385
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -3
Query: 172 TEGRHQAHQNDNGNTNPSSPDKGSRESQDSAACHLSGDQHTRLPNAESAVLTTT 11
+ H H+++N N NPS+ G+ S S + SG + +E + T
Sbjct: 6 SNSNHNHHESNNNNNNPSTRSWGTAVSGQSVS--TSGSMGSPSSRSEQTITVVT 57
>At4g11860.1 68417.m01887 expressed protein contains Pfam domain
PF04424: Protein of unknown function (DUF544)
Length = 682
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 508 RGSEGDYTSEGQILRAVKEDKRSHGSDHDQVPSANGQCWDQSE*ELFDDLS 356
R +GD E ++L+A++ S G +D P+ NG +Q F D S
Sbjct: 247 RMRKGDLEEETELLQALQ---LSQGQGNDPTPNTNGDSTNQDSAFTFSDAS 294
>At3g54930.1 68416.m06087 serine/threonine protein phosphatase 2A
(PP2A) regulatory subunit B', putative similar to
SWISS-PROT:Q28653 serine/threonine protein phosphatase
2A, 56 kDa regulatory subunit, delta isoform (PP2A, B
subunit, B' delta isoform, PP2A, B subunit, B56 delta
isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B
subunit, R5 delta isoform, PP2A, B subunit, B'-gamma)
[Oryctolagus cuniculus]; contains Pfam domain, PF01603:
Protein phosphatase 2A regulatory B subunit (B56 family)
Length = 497
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = -3
Query: 172 TEGRHQAHQNDNGNTNPSSPDKGSRESQDSAACHLSGDQHT 50
++ HQ + N+N NT+ ++ +GSR + + + +G+ T
Sbjct: 16 SDQHHQDNNNNNNNTSTNTVVRGSRTTTPAPSSVSNGESQT 56
>At1g72650.2 68414.m08402 myb family transcription factor contains
Pfam PF00249: Myb-like DNA-binding domain
Length = 630
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -3
Query: 640 GTPKRKHDGAES-KEEIRKAVDTPTKHERTDFVHHLNKVQDAGNHRGSEGDYTSEGQILR 464
G ++ +D + ++E+ V + H+N + GNH + DY+SE + +
Sbjct: 298 GNQEKSNDVTNAIRKEMGDDVRATKMKDAPSSTDHVNGHSNGGNHYYASEDYSSEQRAAK 357
Query: 463 AVKEDKRSH 437
V++ R +
Sbjct: 358 RVRKPTRRY 366
>At1g72650.1 68414.m08401 myb family transcription factor contains
Pfam PF00249: Myb-like DNA-binding domain
Length = 624
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -3
Query: 640 GTPKRKHDGAES-KEEIRKAVDTPTKHERTDFVHHLNKVQDAGNHRGSEGDYTSEGQILR 464
G ++ +D + ++E+ V + H+N + GNH + DY+SE + +
Sbjct: 292 GNQEKSNDVTNAIRKEMGDDVRATKMKDAPSSTDHVNGHSNGGNHYYASEDYSSEQRAAK 351
Query: 463 AVKEDKRSH 437
V++ R +
Sbjct: 352 RVRKPTRRY 360
>At1g62880.1 68414.m07100 cornichon family protein contains Pfam
profile: PF03311 cornichon protein
Length = 137
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 272 LGKTWSVVVSMAIIVTLFGASVVYLLMAA 358
+G+ W+ ++S I++TL G V L+ A
Sbjct: 1 MGEVWTWIISFLILITLLGLIVYQLISLA 29
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,176,565
Number of Sequences: 28952
Number of extensions: 340311
Number of successful extensions: 1246
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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