Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J13
(787 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 3e-37
SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35) 78 9e-15
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09) 35 0.065
SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05) 30 2.4
SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1) 28 7.5
SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21) 28 7.5
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_27146| Best HMM Match : LIM (HMM E-Value=9.7) 28 7.5
SB_21674| Best HMM Match : LIM (HMM E-Value=0.44) 28 7.5
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 28 9.9
SB_46808| Best HMM Match : Paramecium_SA (HMM E-Value=4.2) 28 9.9
SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 152 bits (369), Expect = 3e-37
Identities = 79/206 (38%), Positives = 116/206 (56%), Gaps = 1/206 (0%)
Frame = +2
Query: 146 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 325
+V+IA AVRTP+ V A+ RA I ++ EV +G V +A G
Sbjct: 9 DVIIACAVRTPVGSHNGDLSSLKAHELGSIVVKEALCRASISPCDVSEVILGQVLTAGQG 68
Query: 326 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 505
Q PARQA I AG+P VN +C SG+K++ L Q + G +I++AGG ESMS P
Sbjct: 69 QGPARQAAIHAGIPACVPAYGVNMLCGSGLKAVALGYQAVAMGDSNIVVAGGQESMSQAP 128
Query: 506 FYL-KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSY 682
R +G M L+D ++ DGL D +N +HMG AEN AK+ +++R++QD +A+ S
Sbjct: 129 HCCHMRPALKFGDMTLIDTMLKDGLMDSFNNYHMGITAENVAKQWEVSREEQDNFALTSQ 188
Query: 683 KRSAAAYEAKAFVDELVPVPVPQKRG 760
+R+ A +A F DE+V V + + G
Sbjct: 189 QRTETAQKAGYFSDEIVTVSIKTRAG 214
>SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35)
Length = 415
Score = 77.8 bits (183), Expect = 9e-15
Identities = 34/62 (54%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = +2
Query: 605 GNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAE 781
G CAEN A K ITR++QD+YA++SY+R+AAA++A F E+VPV +PQK+G P ++F E
Sbjct: 59 GVCAENAASKYNITREEQDDYAIHSYRRTAAAWDAGKFKQEVVPVNIPQKKGKPDIVFEE 118
Query: 782 XE 787
E
Sbjct: 119 DE 120
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 11/60 (18%)
Frame = +2
Query: 320 LGQAPARQAVIFAG-----------LPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDI 466
+GQAPARQA + AG LP ST CTT+NKVCASGMKSIM AAQ L G+Q +
Sbjct: 1 MGQAPARQAALGAGTRXVTSIRDQALPISTPCTTINKVCASGMKSIMAAAQSLMCGSQGV 60
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 67.3 bits (157), Expect = 1e-11
Identities = 39/83 (46%), Positives = 54/83 (65%)
Frame = +2
Query: 539 GMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAF 718
G Q+ D + + GLTD+ MG AEN A+K ITR++ D++A+ S +R AAA+E+ AF
Sbjct: 799 GAQMEDTL-WQGLTDMLPGLPMGITAENLAEKYNITREECDQFALLSQQRWAAAHESGAF 857
Query: 719 VDELVPVPVPQKRGAPVIFAEXE 787
E+VPVPV K+G P FA E
Sbjct: 858 TAEIVPVPVKGKKG-PEQFAVDE 879
>SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09)
Length = 162
Score = 35.1 bits (77), Expect = 0.065
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 602 MGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDEL 730
MG+ A+ A ++RQ+QDEYA+ S+ + A +A D L
Sbjct: 13 MGHSADRLASAFHVSRQEQDEYALRSHTLAHQATQAGKLTDVL 55
>SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -1
Query: 547 LHSSIRSFTSLQIKRYI*HRFHPTSKYYILGSSL*TLCCQ-HYRFHARGTYFVYSCTYGT 371
+HS+ R+ + RY H T + S+ TLC Q H R+ + T+ +YS T+
Sbjct: 102 MHSNTRTLCTKTHARYALKHTHTT-----MHSNTRTLCTQTHARYALKHTHTMYSNTHTL 156
Query: 370 FWQTCKYYSL 341
QT +Y+L
Sbjct: 157 CTQTHAHYAL 166
>SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05)
Length = 1433
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Frame = +2
Query: 554 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 712
DG+VFD ++ + M C+ N K + +Q E+ +Y R +A A
Sbjct: 1214 DGVVFDAAIELAHPSDMWVCSTN--KMGALVQQRLIEHHRKNYPRLSATIRFDPDPSVAH 1271
Query: 713 AFVDELVPVPVPQKRGAPV 769
+ + PVPVP KRG V
Sbjct: 1272 RYRKQERPVPVPGKRGEKV 1290
>SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 298 WQCLFCKFGPSTCKTSCNICRFAKKY-HMYNCK-QSMCLWHEIYNVGSTR 441
W+C K PS ++ + F KKY H + +S LW+ Y + + R
Sbjct: 80 WECEHVKPVPSDVRSKMRLSGFYKKYLHAFGIPVRSNTLWYRTYAMSTDR 129
>SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1)
Length = 908
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Frame = +2
Query: 554 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 712
DG+ FD + + +M C+ N L +Q E+ +Y R A A
Sbjct: 564 DGVAFDAAIEQAHSSYMWVCSTNKIGAL--VQQRLIEHHRKNYPRLPATIRFDPDPSVAH 621
Query: 713 AFVDELVPVPVPQKRGAPVI 772
+ + PVPVP KRG V+
Sbjct: 622 CYRKQGRPVPVPGKRGEKVV 641
>SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21)
Length = 956
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +2
Query: 554 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 712
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 735 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 792
Query: 713 AFVDELVPVPVPQKRGAPV 769
+ + PVPVP KRG V
Sbjct: 793 RYRKQGRPVPVPGKRGEKV 811
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 298 WQCLFCKFGPSTCKTSCNICRFAKKYHMYNCKQSMCL 408
WQ + + GP KTSC +C KY++ N CL
Sbjct: 864 WQSNYTQCGPCASKTSCPVCNI--KYNL-NDLMIQCL 897
>SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +2
Query: 554 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 712
DG+ FD + + M C+ N K + +Q E+ +Y R A A
Sbjct: 707 DGVAFDAAIEQAHPSDMWVCSTN--KMGALVQQQLVEHHRKNYPRLPAIIRFDPDPSVAH 764
Query: 713 AFVDELVPVPVPQKRGAPV 769
+ + PVPVP KRGA V
Sbjct: 765 RYRKQGRPVPVPGKRGAKV 783
>SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 28.3 bits (60), Expect = 7.5
Identities = 27/102 (26%), Positives = 41/102 (40%)
Frame = +2
Query: 251 IERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIML 430
I + GI EEI +V A + + + G PKS +CT+VN+V G+ +
Sbjct: 72 IVKVGITTEEIDY----HVHKAIIEHGAYPSPLNYRGFPKS-VCTSVNEVAVHGIPNSRC 126
Query: 431 AAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVD 556
G + GG+ F + G G +LVD
Sbjct: 127 LQNGDLLSVDISLFYGGVHGDLCETFLV--GNVDESGRRLVD 166
>SB_27146| Best HMM Match : LIM (HMM E-Value=9.7)
Length = 296
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +2
Query: 554 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 712
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 102 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 159
Query: 713 AFVDELVPVPVPQKRGAPV 769
+ + PVPVP KRG V
Sbjct: 160 RYRKQGRPVPVPGKRGEKV 178
>SB_21674| Best HMM Match : LIM (HMM E-Value=0.44)
Length = 885
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +2
Query: 554 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 712
DG+ FD + ++ M C+ N K + +Q E+ + Y R A A
Sbjct: 664 DGVAFDAAIEQAHRSDMWVCSTN--KMGALVQQRLVEHHMKKYPRLPATIRFDPDPSVAH 721
Query: 713 AFVDELVPVPVPQKRGAPV 769
+ + PVPVP KRG V
Sbjct: 722 RYRKQGRPVPVPGKRGEKV 740
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 582 SVSPSNTIPSTNCIPPYEVSP 520
+++PSNT+P TNC P E +P
Sbjct: 928 ALNPSNTVP-TNCCPSGETTP 947
>SB_46808| Best HMM Match : Paramecium_SA (HMM E-Value=4.2)
Length = 191
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 305 VCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDI 466
VCSA LG +PA+ V FA L T + SIM + +Q ++ +
Sbjct: 67 VCSAELGVSPAKLCVSFAELIIGDSLTVDQAKAQMAIWSIMASNNAIQVWSRPL 120
>SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 820
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 177 GVLTADAITTSLRETLVENAAIAV--KSCNKTLKSNKTMLXLDT 52
G T A+T S TL + V K+C+ TL SNK++L + T
Sbjct: 383 GGSTGSAMTGSESPTLPTTPCVRVIYKACDVTLLSNKSLLVMKT 426
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,995,579
Number of Sequences: 59808
Number of extensions: 459015
Number of successful extensions: 1374
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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