Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_J12
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     26   0.23 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   3.8  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   3.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   3.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.6  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 9/33 (27%), Positives = 21/33 (63%)
 Frame = +3

Query: 126 LPGVDTKCDCIGKAVLIEINKNLTGESQFVYWN 224
           +PG   +  C+G  V+I++  +L+ +S  ++W+
Sbjct: 105 MPGPSVEV-CLGDEVIIDVVNHLSSDSTTIHWH 136


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/35 (22%), Positives = 19/35 (54%)
 Frame = +3

Query: 126 LPGVDTKCDCIGKAVLIEINKNLTGESQFVYWNKI 230
           +PG   +  C G  V+I++  ++ G    ++W+ +
Sbjct: 171 IPGPSIQV-CEGDKVVIDVENHIEGNEVTLHWHGV 204


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/35 (22%), Positives = 19/35 (54%)
 Frame = +3

Query: 126 LPGVDTKCDCIGKAVLIEINKNLTGESQFVYWNKI 230
           +PG   +  C G  V+I++  ++ G    ++W+ +
Sbjct: 171 IPGPSIQV-CEGDKVVIDVENHIEGNEVTLHWHGV 204


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 487 LSHVNTLTLQWKRK 528
           LS+VN+LTL  KRK
Sbjct: 147 LSNVNSLTLTLKRK 160


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 487 LSHVNTLTLQWKRK 528
           LS+VN+LTL  KRK
Sbjct: 73  LSNVNSLTLTLKRK 86


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 108 HLLAREANRVLVVSSNSHLFLMCK 37
           HLL+   N  LV+   S L  MCK
Sbjct: 203 HLLSGTENLDLVLPIYSQLVFMCK 226


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 95  EKQIVYWWCRRTVTYF 48
           EK +  + CR TV YF
Sbjct: 140 EKSVFDFLCRHTVEYF 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,875
Number of Sequences: 336
Number of extensions: 3849
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)