Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J12
(647 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 37 0.071
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 37 0.071
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 37 0.071
AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane muc... 37 0.071
AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin ... 37 0.071
BC036669-1|AAH36669.1| 496|Homo sapiens COL25A1 protein protein. 31 2.7
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 30 6.2
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 30 6.2
M63473-1|AAA51558.1| 762|Homo sapiens alpha-5 type IV collagen ... 30 6.2
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 30 6.2
M31115-1|AAA52045.1| 772|Homo sapiens COL4A5 protein. 30 6.2
BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein. 30 6.2
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 30 6.2
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 30 6.2
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 30 6.2
M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen ... 30 8.2
BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein. 30 8.2
BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein. 30 8.2
AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha ... 30 8.2
AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha ... 30 8.2
AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha ... 30 8.2
AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha ... 30 8.2
AB209646-1|BAD92883.1| 847|Homo sapiens COL4A1 protein variant ... 30 8.2
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 36.7 bits (81), Expect = 0.071
Identities = 26/98 (26%), Positives = 45/98 (45%)
Frame = +3
Query: 300 NSARQTLRIHGLNVAAQNRGTIGTFVQLLTWNDVIIGSASTDSSPFYYNVVFPDSCTETN 479
+S+ TL++ + ++ + G+ LL+ V AST S+P + T++N
Sbjct: 286 SSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVDRSTPVTTSTQSN 345
Query: 480 STAKPCEYFDVTMETEMVVRLPVTDIIFNFSSTEANLN 593
ST P E + M T V P+T I S+T ++
Sbjct: 346 STPTPPEVITLPMSTPSEVSTPLT--IMPVSTTSVTIS 381
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 36.7 bits (81), Expect = 0.071
Identities = 26/98 (26%), Positives = 45/98 (45%)
Frame = +3
Query: 300 NSARQTLRIHGLNVAAQNRGTIGTFVQLLTWNDVIIGSASTDSSPFYYNVVFPDSCTETN 479
+S+ TL++ + ++ + G+ LL+ V AST S+P + T++N
Sbjct: 3555 SSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVDRSTPVTTSTQSN 3614
Query: 480 STAKPCEYFDVTMETEMVVRLPVTDIIFNFSSTEANLN 593
ST P E + M T V P+T I S+T ++
Sbjct: 3615 STPTPPEVITLPMSTPSEVSTPLT--IMPVSTTSVTIS 3650
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 36.7 bits (81), Expect = 0.071
Identities = 26/98 (26%), Positives = 45/98 (45%)
Frame = +3
Query: 300 NSARQTLRIHGLNVAAQNRGTIGTFVQLLTWNDVIIGSASTDSSPFYYNVVFPDSCTETN 479
+S+ TL++ + ++ + G+ LL+ V AST S+P + T++N
Sbjct: 3555 SSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVDRSTPVTTSTQSN 3614
Query: 480 STAKPCEYFDVTMETEMVVRLPVTDIIFNFSSTEANLN 593
ST P E + M T V P+T I S+T ++
Sbjct: 3615 STPTPPEVITLPMSTPSEVSTPLT--IMPVSTTSVTIS 3650
>AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane mucin
MUC17 protein.
Length = 1029
Score = 36.7 bits (81), Expect = 0.071
Identities = 26/98 (26%), Positives = 45/98 (45%)
Frame = +3
Query: 300 NSARQTLRIHGLNVAAQNRGTIGTFVQLLTWNDVIIGSASTDSSPFYYNVVFPDSCTETN 479
+S+ TL++ + ++ + G+ LL+ V AST S+P + T++N
Sbjct: 91 SSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVDRSTPVTTSTQSN 150
Query: 480 STAKPCEYFDVTMETEMVVRLPVTDIIFNFSSTEANLN 593
ST P E + M T V P+T I S+T ++
Sbjct: 151 STPTPPEVITLPMSTPSEVSTPLT--IMPVSTTSVTIS 186
>AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin
MUC3 protein.
Length = 648
Score = 36.7 bits (81), Expect = 0.071
Identities = 26/98 (26%), Positives = 45/98 (45%)
Frame = +3
Query: 300 NSARQTLRIHGLNVAAQNRGTIGTFVQLLTWNDVIIGSASTDSSPFYYNVVFPDSCTETN 479
+S+ TL++ + ++ + G+ LL+ V AST S+P + T++N
Sbjct: 91 SSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVDRSTPVTTSTQSN 150
Query: 480 STAKPCEYFDVTMETEMVVRLPVTDIIFNFSSTEANLN 593
ST P E + M T V P+T I S+T ++
Sbjct: 151 STPTPPEVITLPMSTPSEVSTPLT--IMPVSTTSVTIS 186
>BC036669-1|AAH36669.1| 496|Homo sapiens COL25A1 protein protein.
Length = 496
Score = 31.5 bits (68), Expect = 2.7
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 72 PPIHDLLLGLKGAMGDPGLPGVDTKCDCIG-KAVLIEINKNLTGESQFVYWNKIASHSL- 245
PP L G KG G PG+PG+D + G K + + + +WN ++ S
Sbjct: 381 PPGPQGLQGTKGEQGSPGIPGMDGEQGLKGSKGDMGDPGSQWNERRKRRFWNAGSTGSFY 440
Query: 246 -KDMLGIRSSQITWLHG 293
+ RS TW HG
Sbjct: 441 HRPTRPTRSPWPTWPHG 457
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 chain
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 75 PIHDLLLGLKGAMGDPGLPGV 137
P+ LLG KG G+PGLPG+
Sbjct: 954 PMDPNLLGSKGEKGEPGLPGI 974
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +3
Query: 96 GLKGAMGDPGLPGV 137
G+KG++GDPGLPG+
Sbjct: 1095 GIKGSVGDPGLPGL 1108
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 chain
protein.
Length = 1691
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 75 PIHDLLLGLKGAMGDPGLPGV 137
P+ LLG KG G+PGLPG+
Sbjct: 954 PMDPNLLGSKGEKGEPGLPGI 974
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +3
Query: 96 GLKGAMGDPGLPGV 137
G+KG++GDPGLPG+
Sbjct: 1095 GIKGSVGDPGLPGL 1108
>M63473-1|AAA51558.1| 762|Homo sapiens alpha-5 type IV collagen
protein.
Length = 762
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 75 PIHDLLLGLKGAMGDPGLPGV 137
P+ LLG KG G+PGLPG+
Sbjct: 31 PMDPNLLGSKGEKGEPGLPGI 51
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +3
Query: 96 GLKGAMGDPGLPGV 137
G+KG++GDPGLPG+
Sbjct: 172 GIKGSVGDPGLPGL 185
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 75 PIHDLLLGLKGAMGDPGLPGV 137
P+ LLG KG G+PGLPG+
Sbjct: 873 PMDPNLLGSKGEKGEPGLPGI 893
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +3
Query: 96 GLKGAMGDPGLPGV 137
G+KG++GDPGLPG+
Sbjct: 1014 GIKGSVGDPGLPGL 1027
>M31115-1|AAA52045.1| 772|Homo sapiens COL4A5 protein.
Length = 772
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 75 PIHDLLLGLKGAMGDPGLPGV 137
P+ LLG KG G+PGLPG+
Sbjct: 41 PMDPNLLGSKGEKGEPGLPGI 61
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +3
Query: 96 GLKGAMGDPGLPGV 137
G+KG++GDPGLPG+
Sbjct: 182 GIKGSVGDPGLPGL 195
>BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein.
Length = 695
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 75 PIHDLLLGLKGAMGDPGLPGV 137
P+ LLG KG G+PGLPG+
Sbjct: 562 PMDPNLLGSKGEKGEPGLPGI 582
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 75 PIHDLLLGLKGAMGDPGLPGV 137
P+ LLG KG G+PGLPG+
Sbjct: 954 PMDPNLLGSKGEKGEPGLPGI 974
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +3
Query: 96 GLKGAMGDPGLPGV 137
G+KG++GDPGLPG+
Sbjct: 1095 GIKGSVGDPGLPGL 1108
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 75 PIHDLLLGLKGAMGDPGLPGV 137
P+ LLG KG G+PGLPG+
Sbjct: 954 PMDPNLLGSKGEKGEPGLPGI 974
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +3
Query: 96 GLKGAMGDPGLPGV 137
G+KG++GDPGLPG+
Sbjct: 1095 GIKGSVGDPGLPGL 1108
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 75 PIHDLLLGLKGAMGDPGLPGV 137
P+ LLG KG G+PGLPG+
Sbjct: 954 PMDPNLLGSKGEKGEPGLPGI 974
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +3
Query: 96 GLKGAMGDPGLPGV 137
G+KG++GDPGLPG+
Sbjct: 1095 GIKGSVGDPGLPGL 1108
>M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen
protein.
Length = 1669
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 90 LLGLKGAMGDPGLPGVD 140
L GL G MG PGLPG+D
Sbjct: 1246 LPGLPGPMGPPGLPGID 1262
>BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein.
Length = 1669
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 90 LLGLKGAMGDPGLPGVD 140
L GL G MG PGLPG+D
Sbjct: 1246 LPGLPGPMGPPGLPGID 1262
>BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein.
Length = 1075
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 90 LLGLKGAMGDPGLPGVD 140
L GL G MG PGLPG+D
Sbjct: 652 LPGLPGPMGPPGLPGID 668
>AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 90 LLGLKGAMGDPGLPGVD 140
L GL G MG PGLPG+D
Sbjct: 895 LPGLPGPMGPPGLPGID 911
>AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 90 LLGLKGAMGDPGLPGVD 140
L GL G MG PGLPG+D
Sbjct: 1246 LPGLPGPMGPPGLPGID 1262
>AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 90 LLGLKGAMGDPGLPGVD 140
L GL G MG PGLPG+D
Sbjct: 895 LPGLPGPMGPPGLPGID 911
>AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 90 LLGLKGAMGDPGLPGVD 140
L GL G MG PGLPG+D
Sbjct: 1246 LPGLPGPMGPPGLPGID 1262
>AB209646-1|BAD92883.1| 847|Homo sapiens COL4A1 protein variant
protein.
Length = 847
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 90 LLGLKGAMGDPGLPGVD 140
L GL G MG PGLPG+D
Sbjct: 424 LPGLPGPMGPPGLPGID 440
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,243,550
Number of Sequences: 237096
Number of extensions: 2275133
Number of successful extensions: 9680
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9599
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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