Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J11
(589 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 188 5e-49
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 100 2e-22
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 93 2e-20
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 92 6e-20
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 92 6e-20
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 83 4e-17
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 76 3e-15
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 75 8e-15
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 73 2e-14
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 66 3e-12
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 64 2e-11
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 60 2e-10
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 33 0.023
SPAC328.08c |||tubulin specific chaperone cofactor C |Schizosacc... 27 1.5
SPBC19F8.06c |meu22||amino acid permease, unknown 11|Schizosacch... 27 2.0
SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator ... 25 8.2
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 25 8.2
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 188 bits (458), Expect = 5e-49
Identities = 85/155 (54%), Positives = 108/155 (69%)
Frame = +3
Query: 45 SAAQLXITKALNXLNLPKTCNTEFPDPDDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYP 224
S AQ+ I K + L +P T +T +PDP L L I PDEG+Y+GGKF F ++ NYP
Sbjct: 22 SPAQIRIQKDVTDLEIPSTMSTSWPDPIKLNVLHLEIRPDEGYYKGGKFKFRIQIDDNYP 81
Query: 225 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 404
H+PPKVKC +YHPNID+EGNVCLNILR+DW PVL +NSI+ GLQ+LFL PN EDPLNK
Sbjct: 82 HDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNK 141
Query: 405 EAADELQSNRRLFEQHVQRAMRGGYVGTSYFERCL 509
EAA +L + + F V+ AM+GG V F+ +
Sbjct: 142 EAAADLHKDPQGFASRVRTAMKGGLVNGISFDNVM 176
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 100 bits (239), Expect = 2e-22
Identities = 46/119 (38%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Frame = +3
Query: 93 PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHP 269
P +C+ P DDL +++ I P + Y GG F S +YP +PPKV T +YHP
Sbjct: 18 PSSCSAG-PVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHP 76
Query: 270 NIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFE 446
NI+ G++CL+ILR+ W P LT++ ++ + L +PNP+DPL E A +++R +E
Sbjct: 77 NINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYE 135
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 93.5 bits (222), Expect = 2e-20
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +3
Query: 159 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRED-WKPVLT 335
P + Y GGKF FS K +YP +PP ++ T +YHPN D EGNVCL IL++ +KP +
Sbjct: 46 PSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIK 105
Query: 336 VNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQ 449
+ S++ + L EPNP+DPL A++ +++R F++
Sbjct: 106 LRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDK 143
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 91.9 bits (218), Expect = 6e-20
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +3
Query: 117 PDPDDLLNFKLII-CPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P D+L FK+ + P + Y GGKF + YP PP V+ T +YHPN+D G +
Sbjct: 26 PTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRI 85
Query: 294 CLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSN 431
CL+ L++DW P L + +++ +Q L PNP+DPL+ + A + N
Sbjct: 86 CLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKEN 131
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 91.9 bits (218), Expect = 6e-20
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Frame = +3
Query: 114 FPDPD-DLLNFK-LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEG 287
FPD D +LL++ I P + +Y G KF S NYP+ PP + + ++HPN+D+ G
Sbjct: 51 FPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSG 110
Query: 288 NVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAAD 416
N+CL+IL++ W V V +I+ LQ L EPN PLN +AA+
Sbjct: 111 NICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAE 153
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 82.6 bits (195), Expect = 4e-17
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +3
Query: 126 DDLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLE-GNVCL 299
DD+ + K + EG Y GG FV ++ +YP PPK+ +T +YHPN+ + G +CL
Sbjct: 31 DDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICL 90
Query: 300 NILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLF 443
+IL++ W PV T+ S + LQ L P P +P + + A N + F
Sbjct: 91 DILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQF 138
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 76.2 bits (179), Expect = 3e-15
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 16/159 (10%)
Frame = +3
Query: 42 ASAAQLXITKALNXL--NLPKTCNTEFPDPDDLLNFK-LIICPDEGFYRGGKFVFSFKVG 212
+SA++ + K L + N P+ + D + ++ +II P++ Y GG F +
Sbjct: 3 SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFP 62
Query: 213 PNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR-------------EDWKPVLTVNSIVY 353
+YP PPK+K T ++HPN+ G VC++IL E W PV + +I+
Sbjct: 63 QDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILI 122
Query: 354 GLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 470
+ + PN E P N +AA E + N + F++ V+R +R
Sbjct: 123 SVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVR 161
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 74.9 bits (176), Expect = 8e-15
Identities = 34/111 (30%), Positives = 59/111 (53%)
Frame = +3
Query: 147 LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKP 326
+II P + + G F YP++PP VK + ++HPN+ G +CL+IL+ W P
Sbjct: 39 VIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSP 98
Query: 327 VLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGY 479
V +I+ +Q L +PN P N EAA + N++ + + V++ + +
Sbjct: 99 TYDVAAILTSIQSLLNDPNNASPANAEAAQLHRENKKEYVRRVRKTVEDSW 149
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 73.3 bits (172), Expect = 2e-14
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Frame = +3
Query: 129 DLLNFKL-IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNI 305
DL+N+K+ I + + GG + + YP PPK + ++HPN+ G VCL+I
Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSI 96
Query: 306 LRED--WKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 470
L E+ WKP +T+ I+ G+Q L +PN P EA + ++ +E+ V+ R
Sbjct: 97 LNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQAR 153
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 66.5 bits (155), Expect = 3e-12
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +3
Query: 129 DLLNFKLII-CPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLN 302
D+ ++K +I P E Y GG++V V YP PP V +T + HPNI G VC++
Sbjct: 33 DMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMD 92
Query: 303 ILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQS 428
IL+ W P ++ S + L + PLN +AA L++
Sbjct: 93 ILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRT 134
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 63.7 bits (148), Expect = 2e-11
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 159 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVL- 332
P E Y GG + ++ YP + P + ++HPNID L G+VCL+++ + W P+
Sbjct: 39 PSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFD 98
Query: 333 TVNSIVYGLQYLFLEPNPEDPLNKEAA 413
+N L L PN DPLN EAA
Sbjct: 99 MINIFEVFLPQLLRYPNASDPLNGEAA 125
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 60.1 bits (139), Expect = 2e-10
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Frame = +3
Query: 126 DDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLN 302
DD + +I PD + GG + + K +YP PP +K E +HPN+ +G VC++
Sbjct: 33 DDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCIS 92
Query: 303 ILR-------------EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLF 443
IL E W PV +V I+ + + EPN E N +A + +R +
Sbjct: 93 ILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEY 152
Query: 444 EQHVQRAMR 470
+ V+R R
Sbjct: 153 CRVVRRLAR 161
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 33.5 bits (73), Expect = 0.023
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +3
Query: 117 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P +++L + II P + Y GG++ + P+YP +PP ++ T +
Sbjct: 29 PATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRL 86
Query: 294 CLNIL---REDWKPVLTVNSIVYGL 359
CL+ + W P V++I+ GL
Sbjct: 87 CLSFSDFHPKSWNPSWMVSTILVGL 111
>SPAC328.08c |||tubulin specific chaperone cofactor C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +1
Query: 364 IYSWNQTLKIPSTRKQRTSSKATGDFSNNTFRELCEAATSAHLISNDASNENLHTCKKC 540
+Y N TL + + + Q +N + ++ S ++ ++ S+ NLH KC
Sbjct: 114 VYFENDTLYLANLKNQNIGDNVIPYPNNKAVKVSAKSLRSCNISISNCSSVNLHNATKC 172
>SPBC19F8.06c |meu22||amino acid permease, unknown
11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 2.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 393 PLNKEAADELQSNRRLFEQHVQRAMRGGYVGTSYF 497
PL E +LQ R+L +H+Q GG VGT F
Sbjct: 49 PLQPEDTQDLQ--RKLKPRHMQMIAIGGCVGTGLF 81
>SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 325
Score = 25.0 bits (52), Expect = 8.2
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +3
Query: 123 PDDLLNFKLII--CPDEGFYRGGKFVFSFKVGPNYPHEP 233
PD +LN K++ ++ KF+ K GP Y H P
Sbjct: 237 PDAILNKKIVDEKANSNLYFSAIKFINVMKKGPFYEHSP 275
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 25.0 bits (52), Expect = 8.2
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 27 RLTKKASAAQLXITKALNXLNLPKTCNTEFPDPDDLLNFKLIICPDEGFYRGGK 188
R KA AA L T + NT+FP +LL +LI+ + F R K
Sbjct: 160 RSIMKAQAASLPFTPIYAAMTA--VINTKFPQIGELLLTRLIVQFRKSFQRNDK 211
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,288,989
Number of Sequences: 5004
Number of extensions: 47260
Number of successful extensions: 175
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 254167452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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