Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J11
(589 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 98 5e-21
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 96 2e-20
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 85 3e-17
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 83 2e-16
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 78 5e-15
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 8e-10
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 60 1e-09
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 54 7e-08
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 38 0.006
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 37 0.011
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 31 0.92
SB_38153| Best HMM Match : DUF590 (HMM E-Value=2.7e-11) 30 1.6
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_55186| Best HMM Match : TPR_2 (HMM E-Value=0.91) 29 3.7
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6) 28 6.5
SB_11956| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 97.9 bits (233), Expect = 5e-21
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Frame = +3
Query: 126 DDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNI 305
D++ F+L I P +G YRGG+F FS + +YP+ P + C+T +YHPN+D VC+++
Sbjct: 34 DNMEEFELQITPTDGAYRGGQFKFSVRT-TDYPNVAPSINCKTKIYHPNMDGYDGVCMSL 92
Query: 306 LREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK--EAADELQSNRRLFEQHVQRAMRGGY 479
L +DW+ + +V GL +LF PN EDPL+ E E + FE++V+ ++ G
Sbjct: 93 L-DDWQASNDLEDLVQGLLFLFYNPNLEDPLSSLFEEESEEEYEYGSFEENVRASLEGKT 151
Query: 480 VGTSYFERCL 509
V F+R L
Sbjct: 152 VAGENFQRVL 161
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 96.3 bits (229), Expect = 2e-20
Identities = 52/131 (39%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Frame = +3
Query: 126 DDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDL-EGNVCLN 302
D++ F+L I P +G YRGG+F FS K +YP+ PP +C +YHPN+DL +G+VCL+
Sbjct: 34 DNMEEFELQITPTDGAYRGGQFKFSVKT-EDYPNTPPVPRCVNNIYHPNMDLDDGSVCLS 92
Query: 303 ILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK--EAADELQSNRRLFEQHVQRAMRGG 476
+L +DW + +V GL +LF PN EDPL+ + D+ + FE++V+ ++ G
Sbjct: 93 LL-DDWNESNDLEDLVQGLLFLFYNPNLEDPLSPLFDLTDDYEYGS--FEENVRASLEGK 149
Query: 477 YVGTSYFERCL 509
V F R L
Sbjct: 150 TVEGITFPRAL 160
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Frame = +3
Query: 174 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRED----WKPVLTVN 341
Y G F ++ YP EPPKV+ T +YHPNID G +CL+ L+ WKP L ++
Sbjct: 10 YHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNIS 69
Query: 342 SIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLF 443
S++ + L EPNP+DPL E ++E + N+ F
Sbjct: 70 SVLSTILILMAEPNPDDPLMAEISNEFKYNKAQF 103
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +3
Query: 120 DPDDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCL 299
D ++L ++ +I P+ Y G F YP +PPK+ +T +YHPNID +G VCL
Sbjct: 19 DESNILYWQGLIVPEMPPYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQVCL 78
Query: 300 NILR-EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 458
I+ E+WKP ++ L L +P PE PL + A+E +++ F ++ +
Sbjct: 79 PIISPENWKPATKTEQVIQALLALVHDPEPEHPLRADLAEEYSKDKKKFMKNAE 132
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = +3
Query: 204 KVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRED----WKPVLTVNSIVYGLQYLF 371
K+ + P EPPKV+ T +YHPNID G +CL+ L+ WKP L ++S++ + L
Sbjct: 34 KLEASTPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILM 93
Query: 372 LEPNPEDPLNKEAADELQSNRRLF 443
EPNP+DPL E ++E + N+ F
Sbjct: 94 AEPNPDDPLMAEISNEFKYNKAQF 117
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Frame = +3
Query: 120 DPDDLLNFKLIICPDEG-FYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVC 296
D +DL +++++ G +Y G F S YP PP + + ++HPN+ G VC
Sbjct: 358 DDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISDIWHPNVHKNGEVC 417
Query: 297 LNILRED-------------WKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAA 413
++IL E W+P+ TV +I+ + + EPN E P N +AA
Sbjct: 418 ISILHEPGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPNDESPANVDAA 469
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 60.9 bits (141), Expect = 8e-10
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +3
Query: 252 TAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEA 410
T ++HPN+ G +C+N L++DWKP L + ++ ++ L + PNPE LN+EA
Sbjct: 149 TKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEA 201
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 60.5 bits (140), Expect = 1e-09
Identities = 44/142 (30%), Positives = 60/142 (42%), Gaps = 3/142 (2%)
Frame = +3
Query: 18 SRRRLTKKASAAQLXITKALNXLNL--PKTCNTEFPDPDDLLN-FKLIICPDEGFYRGGK 188
S R K S A I + L + L P C+ P DDL + I+ P Y GG
Sbjct: 85 SSRFTAKNQSTAAKRIQRELTEITLDPPPNCSAG-PKGDDLYEWYSTILGPPGSVYEGGV 143
Query: 189 FVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYL 368
F +YP +PPK G VCL+IL++ W P LT++ ++ + L
Sbjct: 144 FFLDIHFPSDYPFKPPK---------------GMVCLDILKDSWSPALTISKVLLSICSL 188
Query: 369 FLEPNPEDPLNKEAADELQSNR 434
+ NP DPL A NR
Sbjct: 189 LTDCNPADPLVGSIAALYVQNR 210
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 54.4 bits (125), Expect = 7e-08
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 14/115 (12%)
Frame = +3
Query: 111 EFPDPDDLLNFKLIICPDEG-FYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEG 287
E PD + + + I G Y GG F +YP+ PP + T ++HPNI G
Sbjct: 1147 EVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYESG 1206
Query: 288 NVCLNILR-------------EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAA 413
+VC++IL E W P V +I+ + L EPN P N +A+
Sbjct: 1207 DVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDAS 1261
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +3
Query: 117 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCET-----AVYHPNID 278
PD DD+ +I P + Y GG F F + P+YP PP+VK T ++PN+
Sbjct: 5 PDKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLY 64
Query: 279 LEGNVCLNIL 308
G VCL+I+
Sbjct: 65 RNGKVCLSII 74
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 37.9 bits (84), Expect = 0.006
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 318 WKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSN 431
W P L + +++ +Q L PNP+DPL + A++ + N
Sbjct: 3 WSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKVN 40
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 37.1 bits (82), Expect = 0.011
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 18 SRRRLTKKASAAQLXITKALNXLNL--PKTCNTEFPDPDDLLN-FKLIICPDEGFYRGGK 188
S R K S A I + L + L P C+ P DDL + I+ P Y GG
Sbjct: 125 SSRFTAKNQSTAAKRIQRELTEITLDPPPNCSAG-PKGDDLYEWYSTILGPPGSVYEGGV 183
Query: 189 FVFSFKVGPNYPHEPPK 239
F +YP +PPK
Sbjct: 184 FFLDIHFPSDYPFKPPK 200
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 30.7 bits (66), Expect = 0.92
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +3
Query: 93 PKTCNTEF----PDPDDLLN-FKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKV 242
PKT +T P D L + I+ P Y GG F +YP +PPKV
Sbjct: 34 PKTLSTAAKSAGPKGDKLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88
>SB_38153| Best HMM Match : DUF590 (HMM E-Value=2.7e-11)
Length = 733
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +3
Query: 102 CNTEFPDPDDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDL 281
CNT P + LL ++ GF + GKFV S K+ + P C+ + P D
Sbjct: 126 CNTASPGMEMLLRVFALVS-GRGFKKAGKFVLSSKL---WESSTPSKTCDVIITFPK-DT 180
Query: 282 EGNVCLNIL 308
E V + +L
Sbjct: 181 EDYVVMWLL 189
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/85 (20%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +3
Query: 117 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P D+L + + P + + GG++ + P YP +PP + T + ++ +
Sbjct: 33 PLEDNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLTP--NGRFEIGKKI 90
Query: 294 CLNILR---EDWKPVLTVNSIVYGL 359
CL++ E W+P ++ +++ +
Sbjct: 91 CLSMSAHHPETWQPSWSIRTVLMAI 115
>SB_55186| Best HMM Match : TPR_2 (HMM E-Value=0.91)
Length = 571
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 21 RRRLTKKASAAQLXITKALNXLNLPKTCNTEF-PDPD 128
R+R KK L + LPK CNTE PDP+
Sbjct: 443 RKRKRKKGEYRILLTPSVMECGKLPKNCNTEVDPDPE 479
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 192 VFSFKV--GPNYPHEPPKVKCETAVYHPNIDLEG 287
+++ K+ GPNYP +PP VK + + ++ +G
Sbjct: 7 IYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 192 VFSFKV--GPNYPHEPPKVKCETAVYHPNIDLEG 287
+++ K+ GPNYP +PP VK + + ++ +G
Sbjct: 7 IYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6)
Length = 249
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 23 AAAHKKSISSPITHYKSFEXIESTENMQHRIP 118
A+AH++ I + HYK+ T +QH+ P
Sbjct: 49 ASAHRRGIKNTFRHYKTPLRHHKTPYLQHKTP 80
>SB_11956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 832
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 361 SIYSWNQTLKIPSTRKQRTSSKATGDFSNN 450
SI S + TL P T + +S TGD SNN
Sbjct: 51 SIESTSTTLSSPDTTGEGSSDNMTGDNSNN 80
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,244,933
Number of Sequences: 59808
Number of extensions: 356426
Number of successful extensions: 833
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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