Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J11
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 99 3e-21
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 99 3e-21
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 97 1e-20
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 95 4e-20
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 95 4e-20
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 91 4e-19
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 87 9e-18
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 78 4e-15
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 75 4e-14
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 75 5e-14
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 75 5e-14
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 66 2e-11
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 65 4e-11
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 63 1e-10
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 62 4e-10
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 61 5e-10
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 61 7e-10
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 53 1e-07
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 46 2e-05
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 41 6e-04
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 34 0.065
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 31 0.61
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 30 1.4
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 98.7 bits (235), Expect = 3e-21
Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Frame = +3
Query: 93 PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHP 269
P C+ P DDL +++ I P E Y+GG F + +YP +PPKV T +YHP
Sbjct: 18 PAQCSAG-PVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP 76
Query: 270 NIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQ 449
NI+ G++CL+ILR W P LT++ ++ + L +PNP+DPL E A +++R + Q
Sbjct: 77 NINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQ 136
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 98.7 bits (235), Expect = 3e-21
Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Frame = +3
Query: 93 PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHP 269
P C+ P DDL +++ I P E Y+GG F + +YP +PPKV T +YHP
Sbjct: 18 PAQCSAG-PVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP 76
Query: 270 NIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQ 449
NI+ G++CL+ILR W P LT++ ++ + L +PNP+DPL E A +++R + Q
Sbjct: 77 NINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQ 136
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 96.7 bits (230), Expect = 1e-20
Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Frame = +3
Query: 96 KTCNTEFPDPDDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNI 275
K + E P L +L + P EG YRGGKF F V P Y + PP VKC T V+HPNI
Sbjct: 46 KLWHLEVPSTSCLHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNI 105
Query: 276 DLEGNVCLNILRED------WKPVLTVNSIVYGLQYLFLE-PNPEDPLNKEAADELQSNR 434
+ +G++CL+ILR++ W+P + +V+GL LF + + D LN +AA NR
Sbjct: 106 NEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNR 165
Query: 435 RLFEQHVQ 458
F V+
Sbjct: 166 ESFNHRVR 173
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 94.7 bits (225), Expect = 4e-20
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = +3
Query: 117 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P D++L ++ II P E + G F S + YP++PP VK + ++HPN+ +G++
Sbjct: 28 PTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSI 87
Query: 294 CLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRG 473
CL+IL+ W P V +I+ +Q L EPNP P N AA Q NRR +E+ VQ+ +
Sbjct: 88 CLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQ 147
Query: 474 GYV 482
++
Sbjct: 148 SWL 150
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 94.7 bits (225), Expect = 4e-20
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = +3
Query: 117 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P D++L ++ II P E + G F S + YP++PP VK + ++HPN+ +G++
Sbjct: 28 PTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSI 87
Query: 294 CLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRG 473
CL+IL+ W P V +I+ +Q L EPNP P N AA Q NRR +E+ VQ+ +
Sbjct: 88 CLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQ 147
Query: 474 GYV 482
++
Sbjct: 148 SWL 150
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 91.5 bits (217), Expect = 4e-19
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Frame = +3
Query: 117 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
PD + F ++I PD+ + GG F + YP PKV+ T +YHPNID G +
Sbjct: 28 PDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRI 87
Query: 294 CLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSN 431
CL+IL++ W P L + +++ +Q L PNPEDPL + A++ ++N
Sbjct: 88 CLDILKDKWSPALQIRTVLLSIQALLSAPNPEDPLATDVAEQWKTN 133
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 87.0 bits (206), Expect = 9e-18
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Frame = +3
Query: 129 DLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL 308
+LL + +++ PD+ Y G F +YP +PPKV ET +YHPN+D EG CL I+
Sbjct: 31 NLLKWTVLLIPDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPIV 90
Query: 309 -REDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLF----EQHVQR 461
E+WKP ++ L L EP P P+ + A+E Q + + F E+H ++
Sbjct: 91 TAENWKPATKTEQVMMALLSLINEPEPSHPIRADVAEEFQKDHKKFMKTAEEHTRK 146
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 78.2 bits (184), Expect = 4e-15
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 14/131 (10%)
Frame = +3
Query: 120 DPDDLLNFK-LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVC 296
D +D+ ++ L+I P + Y GG F +YP +PPK+K + ++HPNID EGNVC
Sbjct: 29 DDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVC 88
Query: 297 LNIL-------------REDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRR 437
++IL E W PV TV +I+ + + +PN E P N +AA + N
Sbjct: 89 ISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYA 148
Query: 438 LFEQHVQRAMR 470
F++ V + +R
Sbjct: 149 EFKKKVAQCVR 159
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 74.9 bits (176), Expect = 4e-14
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +3
Query: 159 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLE-GNVCLNILREDWKPVLT 335
P + Y GG F K+ YP PP VK T ++HPN+ + G +CL+IL++ W LT
Sbjct: 46 PPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLT 105
Query: 336 VNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFE 446
+ +++ +Q L P P+DP + A + +F+
Sbjct: 106 LRTVLLSIQALMCTPEPKDPQDAVVAKQYMEKPAVFK 142
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 74.5 bits (175), Expect = 5e-14
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +3
Query: 174 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRE--DWKPVLTVNSI 347
+ GG + ++P PPK K E ++HPN+ G VCL++L E DWKP +++ +
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQL 112
Query: 348 VYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQR 461
+ G+Q L PN EDP EA NR +E+ V++
Sbjct: 113 LIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 74.5 bits (175), Expect = 5e-14
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +3
Query: 174 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRE--DWKPVLTVNSI 347
+ GG + ++P PPK K E ++HPN+ G VCL++L E DWKP +++ +
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQL 112
Query: 348 VYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQR 461
+ G+Q L PN EDP EA NR +E+ V++
Sbjct: 113 LIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Frame = +3
Query: 120 DPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVC 296
D D+ ++ +I P+E + G F +YP PPK++ ++HPNI +G VC
Sbjct: 30 DEDNFFEWECLITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVC 89
Query: 297 LNIL-------------REDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRR 437
++IL E W PV ++ I+ + + EPN E P N AA + +R
Sbjct: 90 ISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSMLAEPNDESPANVSAAKMWREDRA 149
Query: 438 LFEQHVQRAMR 470
FE+ +R
Sbjct: 150 QFEKIADSLVR 160
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 64.9 bits (151), Expect = 4e-11
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Frame = +3
Query: 126 DDLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEPPKV---------------KCETA 257
++L++ K I EG Y GG F + +YP EPPKV K T
Sbjct: 48 NNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTR 107
Query: 258 VYHPNIDLE-GNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNR 434
++HPNI + G +CL+IL++ W LT+ +++ LQ + P P DP + A + +N
Sbjct: 108 IWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNY 167
Query: 435 RLF 443
+F
Sbjct: 168 PMF 170
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 63.3 bits (147), Expect = 1e-10
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Frame = +3
Query: 159 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR--------- 311
P + Y+GG F S + NYP+ PP +K T V+HPN+ G++C++IL
Sbjct: 49 PPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSG 108
Query: 312 ----EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAA 413
E W P +V +I+ + L EPN P N +A+
Sbjct: 109 ELACERWNPTQSVRTILLSVISLLNEPNTSSPANVDAS 146
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 61.7 bits (143), Expect = 4e-10
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +3
Query: 126 DDLLNFKLIICPDEG-FYRGGKFVFSFKVGPNYPHEPPKVKC--ETAVYHPNIDLEGNVC 296
+DL +K+ + EG Y G F+ F GP YP P+V ET HP+I G++C
Sbjct: 33 NDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHIC 92
Query: 297 LNILREDWKPVLTVNSI 347
L+IL +DW P L+V S+
Sbjct: 93 LSILSDDWTPALSVQSV 109
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 61.3 bits (142), Expect = 5e-10
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +3
Query: 129 DLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCL-N 302
D+ FK+I D Y+ F + V YP +PP +K VYHPN+D + +C
Sbjct: 44 DIFQFKII--GDGVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPM 101
Query: 303 ILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNR 434
+L+E+WKP T+ ++ L L EP+ P+N +AA + N+
Sbjct: 102 LLQENWKPETTMEDVLLNLIVLLNEPDLSRPVNIDAAHDYIHNK 145
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 60.9 bits (141), Expect = 7e-10
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +3
Query: 162 DEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILRED-WKPVLT 335
+E Y GG F K+G +YP + P VK T ++HP++ +G +CL+ + W +T
Sbjct: 389 EETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVWPVSMT 448
Query: 336 VNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQ 449
+ ++ +Q N ++P++ E ++ +NR +FE+
Sbjct: 449 IYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEK 486
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +3
Query: 159 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVLT 335
P + Y G + + YP + P + ++HPNID G VCL+++ + W +
Sbjct: 42 PKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALYD 101
Query: 336 VNSIV-YGLQYLFLEPNPEDPLNKEAA 413
+ +I L L PN DPLN EAA
Sbjct: 102 LTNIFDTFLPQLLTYPNAADPLNGEAA 128
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +3
Query: 174 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL-REDWKPVLTVNSIV 350
+ GG++ S +P PP + +T ++HPN+DL G++ L +L +E W ++ ++
Sbjct: 83 WEGGEYEVSVNFH-KWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQEHWSSETSLKKLL 141
Query: 351 YGLQYLFLEPNPEDPLNKEAADELQSNRRLFE 446
+ L P+ N EA E ++ R +E
Sbjct: 142 REISNLLATPDLTQAANIEAWMEYENQRENYE 173
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 41.1 bits (92), Expect = 6e-04
Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 14/131 (10%)
Frame = +3
Query: 12 SPSRRRLTKKASAAQLXITKAL--NXLNLPKTCNTEFPDPDDLLNFKLIICPDEGFYRGG 185
SP R TK+ + I AL N N C E D++ LI PD+ Y G
Sbjct: 404 SPHLRDRTKRIAKELASIANALPLNASNSIYVCYDE--GRVDIIKV-LISGPDDTPYANG 460
Query: 186 KFVFSFKVGPNYPHEPPKVKCET-----AVYHPNIDLEGNVCLNIL-------REDWKPV 329
F F YP PPK T ++PN+ +G +CL+IL E W P
Sbjct: 461 LFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPY 520
Query: 330 LTVNSIVYGLQ 362
++ ++ +Q
Sbjct: 521 CSLMQVLVSIQ 531
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.065
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 102 CNTEFPDPDDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEP-PKVKCETAVYHPNID 278
C + LL +I P Y GG F + P H P+V T ++HPN+
Sbjct: 52 CIMRIDETKQLLFHVIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLG 111
Query: 279 LEGNVCLNILREDWKPVLTV--NSIVYGLQ 362
GN + ++ + + L V N IV G++
Sbjct: 112 KYGNWDMRGIQWERRSNLEVLYNFIVEGMR 141
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 31.1 bits (67), Expect = 0.61
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 291 VCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDP 395
VC + +DWKP TV ++ QY+ + N DP
Sbjct: 856 VCRSFTLKDWKPGNTVLTLSANHQYILISGNQSDP 890
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 150 IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
II P Y + + G NYP EPP V+ T V+ ++ V
Sbjct: 45 IIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGV 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,810,865
Number of Sequences: 27780
Number of extensions: 266438
Number of successful extensions: 692
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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