Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J11
(589 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 217 6e-57
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 104 5e-23
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 101 4e-22
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 101 5e-22
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 101 5e-22
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 101 5e-22
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 101 5e-22
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 101 5e-22
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 101 5e-22
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 100 8e-22
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 100 8e-22
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 99 1e-21
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 99 1e-21
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 96 1e-20
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 95 2e-20
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 91 7e-19
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 90 9e-19
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 90 1e-18
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 89 2e-18
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 89 2e-18
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 89 2e-18
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 89 3e-18
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 89 3e-18
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 88 5e-18
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 83 2e-16
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 81 4e-16
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 81 7e-16
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 81 7e-16
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 80 1e-15
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 79 2e-15
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 79 3e-15
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 76 2e-14
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 76 2e-14
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 75 3e-14
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 75 5e-14
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 74 6e-14
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 74 8e-14
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 70 1e-12
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 68 5e-12
At4g36800.1 68417.m05220 RUB1-conjugating enzyme, putative (RCE1... 59 2e-09
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 50 1e-06
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 48 6e-06
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 48 6e-06
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 47 8e-06
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 47 8e-06
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 44 6e-05
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 40 0.001
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 38 0.007
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 38 0.007
At4g08878.1 68417.m01463 inorganic phosphate transporter, putati... 36 0.026
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 32 0.25
At2g25800.1 68415.m03096 expressed protein 29 1.7
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 29 3.0
At4g10520.1 68417.m01724 subtilase family protein contains simil... 28 4.0
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 28 5.3
At1g24706.1 68414.m03104 expressed protein 27 9.3
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 217 bits (529), Expect = 6e-57
Identities = 98/159 (61%), Positives = 122/159 (76%), Gaps = 1/159 (0%)
Frame = +3
Query: 36 KKASAAQLXITKALNXLNLPKTCNTEFPD-PDDLLNFKLIICPDEGFYRGGKFVFSFKVG 212
KK SA +L + K ++ LNLPK+C FP+ +DL+NF++ I PDEG+Y G FVFSF+V
Sbjct: 27 KKQSAGELRLHKDISELNLPKSCKISFPNGKNDLMNFEVTIKPDEGYYLSGNFVFSFQVS 86
Query: 213 PNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPED 392
YPHE PKVKC+T VYHPNIDLEGNVCLNILREDWKPVL +N+++YGL +LF EPN ED
Sbjct: 87 NMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYED 146
Query: 393 PLNKEAADELQSNRRLFEQHVQRAMRGGYVGTSYFERCL 509
PLN EAA L+ N + FE +V+RAM GG VG + F RC+
Sbjct: 147 PLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTSFPRCM 185
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 104 bits (249), Expect = 5e-23
Identities = 47/119 (39%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Frame = +3
Query: 93 PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHP 269
P C+ P +D+ +++ I P E Y GG F+ S P+YP +PPKV +T VYHP
Sbjct: 18 PSNCSAG-PVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHP 76
Query: 270 NIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFE 446
NI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL E A +++R +E
Sbjct: 77 NINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYE 135
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 101 bits (242), Expect = 4e-22
Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Frame = +3
Query: 93 PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHP 269
P +C P +D+ +++ I P E Y GG F+ + P+YP +PPKV T V+HP
Sbjct: 18 PTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 77
Query: 270 NIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFE 446
NI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL E A +++R +E
Sbjct: 78 NINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 136
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 101 bits (241), Expect = 5e-22
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Frame = +3
Query: 51 AQLXITKALNXLNL--PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNY 221
A I K L L P +C+ P DD+ ++ I P + + GG F+ + P+Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAG-PTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 222 PHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLN 401
P +PPKV T VYHPNI+ G++CL+IL+E W P LTV+ ++ + L +PNP+DPL
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120
Query: 402 KEAADELQSNRRLFEQHVQ 458
E A +++R +E Q
Sbjct: 121 PEIAHIYKTDRVKYESTAQ 139
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 101 bits (241), Expect = 5e-22
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Frame = +3
Query: 51 AQLXITKALNXLNL--PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNY 221
A I K L L P +C+ P DD+ ++ I P + + GG F+ + P+Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAG-PTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 222 PHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLN 401
P +PPKV T VYHPNI+ G++CL+IL+E W P LTV+ ++ + L +PNP+DPL
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120
Query: 402 KEAADELQSNRRLFEQHVQ 458
E A +++R +E Q
Sbjct: 121 PEIAHIYKTDRVKYESTAQ 139
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 101 bits (241), Expect = 5e-22
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Frame = +3
Query: 51 AQLXITKALNXLNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 224
A I K L L P T + P +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 225 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 404
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 405 EAADELQSNRRLFE 446
E A ++++ +E
Sbjct: 122 EIAHMYKTDKNKYE 135
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 101 bits (241), Expect = 5e-22
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Frame = +3
Query: 51 AQLXITKALNXLNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 224
A I K L L P T + P +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 225 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 404
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 405 EAADELQSNRRLFE 446
E A ++++ +E
Sbjct: 122 EIAHMYKTDKNKYE 135
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 101 bits (241), Expect = 5e-22
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Frame = +3
Query: 51 AQLXITKALNXLNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 224
A I K L L P T + P +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 225 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 404
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 405 EAADELQSNRRLFE 446
E A +++R +E
Sbjct: 122 EIAHMYKTDRAKYE 135
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 101 bits (241), Expect = 5e-22
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Frame = +3
Query: 51 AQLXITKALNXLNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 224
A I K L L P T + P +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 225 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 404
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 405 EAADELQSNRRLFE 446
E A +++R +E
Sbjct: 122 EIAHMYKTDRAKYE 135
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 100 bits (239), Expect = 8e-22
Identities = 44/119 (36%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Frame = +3
Query: 93 PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHP 269
P +C+ P +D+ +++ I P+E Y GG F+ + P+YP +PPKV T V+HP
Sbjct: 18 PVSCSAG-PTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHP 76
Query: 270 NIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFE 446
NI+ GN+CL+IL++ W P LT++ ++ + L +PNP+DPL E A ++++ +E
Sbjct: 77 NINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYE 135
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 100 bits (239), Expect = 8e-22
Identities = 48/134 (35%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Frame = +3
Query: 51 AQLXITKALNXLNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 224
A I K L L P T + P +D+ +++ I P + Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 225 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 404
+PPKV T V+HPN++ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 62 FKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 405 EAADELQSNRRLFE 446
E A +++R +E
Sbjct: 122 EIAHMYKTDRAKYE 135
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 99 bits (238), Expect = 1e-21
Identities = 48/134 (35%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Frame = +3
Query: 51 AQLXITKALNXLNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 224
A I K L L P T + P +D+ +++ I P + Y GG F+ + P+YP
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 91
Query: 225 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 404
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 92 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 151
Query: 405 EAADELQSNRRLFE 446
E A ++++ +E
Sbjct: 152 EIAHMYKTDKNKYE 165
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 99 bits (238), Expect = 1e-21
Identities = 48/134 (35%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Frame = +3
Query: 51 AQLXITKALNXLNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 224
A I K L L P T + P +D+ +++ I P + Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 225 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 404
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 405 EAADELQSNRRLFE 446
E A ++++ +E
Sbjct: 122 EIAHMYKTDKNKYE 135
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 96.3 bits (229), Expect = 1e-20
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Frame = +3
Query: 93 PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHP 269
P C+ +D+ +++ I P + Y GG F S +YP +PPKV +T VYHP
Sbjct: 18 PANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHP 77
Query: 270 NIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQ 449
NID +G++CL+IL+E W P T + ++ + L +PNP DPL E A + ++ +E
Sbjct: 78 NIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYES 137
Query: 450 HVQR 461
Q+
Sbjct: 138 TAQK 141
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/100 (41%), Positives = 60/100 (60%)
Frame = +3
Query: 159 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTV 338
PD Y GG F S K +YP +PPK +T +YHPNI+ EG++C+NIL++ W P L V
Sbjct: 46 PDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMV 105
Query: 339 NSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 458
++ + L +PNP+DPL E ++NR F+Q +
Sbjct: 106 EKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAR 145
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 90.6 bits (215), Expect = 7e-19
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +3
Query: 114 FPDPDDLLNFK-LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGN 290
FP+ D++ +K I + + G ++ S +YP +PPKVK ET +HPN+D+ GN
Sbjct: 58 FPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGN 117
Query: 291 VCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQR 461
+CL+IL++ W V +I+ +Q L EPN PLN +AA +L SN+ + + V++
Sbjct: 118 ICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAA-QLWSNQEEYRKMVEK 173
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 90.2 bits (214), Expect = 9e-19
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +3
Query: 117 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P D++ F ++I P + Y GG F + YP PKV+ T +YHPNID G +
Sbjct: 29 PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRI 88
Query: 294 CLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSN 431
CL+IL++ W P L + +++ +Q L PNP+DPL++ A +SN
Sbjct: 89 CLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSN 134
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 89.8 bits (213), Expect = 1e-18
Identities = 38/118 (32%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Frame = +3
Query: 117 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P ++++ + +I PD+ + GG F S + +YP++PP V+ + ++HPNI +G++
Sbjct: 28 PQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSI 87
Query: 294 CLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAM 467
CL+IL+ W P+ V +I+ +Q L +PNP P N EAA ++R + + V+ +
Sbjct: 88 CLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVV 145
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/123 (31%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Frame = +3
Query: 117 PDPDDLLNFK-LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P ++++++ LI P++ + GG F + +YP++PP V+ + ++HPNI +G++
Sbjct: 28 PQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSI 87
Query: 294 CLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRG 473
CL+IL+ W P+ V +++ +Q L +PNP+ P N EAA N+R + + V +
Sbjct: 88 CLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQ 147
Query: 474 GYV 482
YV
Sbjct: 148 SYV 150
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 89.0 bits (211), Expect = 2e-18
Identities = 38/115 (33%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Frame = +3
Query: 117 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P ++++ + +I PD+ + GG F S + +YP++PP V+ + ++HPNI +G++
Sbjct: 28 PQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSI 87
Query: 294 CLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 458
CL+IL+ W P+ V +I+ +Q L +PNP P N EAA ++R + + V+
Sbjct: 88 CLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVR 142
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 89.0 bits (211), Expect = 2e-18
Identities = 38/115 (33%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Frame = +3
Query: 117 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P ++++ + +I PD+ + GG F S + +YP++PP V+ + ++HPNI +G++
Sbjct: 28 PQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSI 87
Query: 294 CLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 458
CL+IL+ W P+ V +I+ +Q L +PNP P N EAA ++R + + V+
Sbjct: 88 CLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVR 142
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 88.6 bits (210), Expect = 3e-18
Identities = 43/117 (36%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Frame = +3
Query: 114 FPDPDDLLNFK-LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGN 290
FP+ D++ +K I + + G ++ S +YP + PKVK ET +HPN+DL GN
Sbjct: 59 FPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGN 118
Query: 291 VCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQR 461
+CL+IL++ W V +I+ +Q L EPN PLN +AA +L SN+ + + V++
Sbjct: 119 ICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAA-QLWSNQEEYRKMVEK 174
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 88.6 bits (210), Expect = 3e-18
Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +3
Query: 117 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P +++ F ++I P + Y GG F + YP PKV+ T +YHPNID G +
Sbjct: 29 PSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRI 88
Query: 294 CLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSN 431
CL+IL++ W P L + +++ +Q L PNP+DPL++ A +SN
Sbjct: 89 CLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSN 134
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 87.8 bits (208), Expect = 5e-18
Identities = 37/95 (38%), Positives = 56/95 (58%)
Frame = +3
Query: 147 LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKP 326
+I+ P + Y GG F + YP PKV+ T +YHPNID G +CL+IL++ W P
Sbjct: 7 MILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSP 66
Query: 327 VLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSN 431
L + +++ +Q L PNP+DPL++ A +SN
Sbjct: 67 ALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSN 101
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Frame = +3
Query: 159 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVL- 332
P + Y+GG + ++ YP++ P V T +YHPN+D L G+VCL+++ + W P+
Sbjct: 39 PKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFD 98
Query: 333 TVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 458
VN L L L PNP DPLN EAA + +R +EQ V+
Sbjct: 99 LVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVK 140
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 81.4 bits (192), Expect = 4e-16
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Frame = +3
Query: 159 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVL- 332
P + Y GG + ++ YP++ P V T +YHPN+D + G+VCL+++ + W P+
Sbjct: 39 PKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFD 98
Query: 333 TVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 458
VN L L L PNP DPLN EAA + +R +EQ V+
Sbjct: 99 LVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVK 140
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 80.6 bits (190), Expect = 7e-16
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = +3
Query: 174 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLE-GNVCLNILREDWKPVLTVNSIV 350
Y GG F + YP EPPK++ T V+HPNI + G +CL+IL++ W P LT+ + +
Sbjct: 47 YEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTAL 106
Query: 351 YGLQYLFLEPNPEDPLNKEAADELQSNRRLF 443
+Q L P P+DP + A++ N ++F
Sbjct: 107 VSIQALLSAPEPKDPQDAVVAEQYMKNYQVF 137
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 80.6 bits (190), Expect = 7e-16
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Frame = +3
Query: 159 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL----REDWKP 326
P++ Y G F ++ YP +PP V T +YHPNID G +CL+IL + W+P
Sbjct: 54 PEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQP 113
Query: 327 VLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFE 446
L +++++ ++ L EPNP+D L E + E + NR+ F+
Sbjct: 114 SLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFD 153
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 79.8 bits (188), Expect = 1e-15
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Frame = +3
Query: 45 SAAQLXITKALNXLNL--PKTCNTEFPDPDDLLNF-KLIICPDEGFYRGGKFVFSFKVGP 215
SA+ I + + LN+ P C+ P D+L ++ II P Y GG F
Sbjct: 35 SASGKRIQREMAELNIDPPPDCSAG-PKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPS 93
Query: 216 NYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDP 395
+YP +PPK+ +T +YH N+D G++ +NILR+ W P LT+ ++ ++ +FL+P P P
Sbjct: 94 DYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSP 153
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 79.4 bits (187), Expect = 2e-15
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Frame = +3
Query: 51 AQLXITKALNXLNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 224
A I K L L P T + P +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 225 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSI 347
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ +
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 78.6 bits (185), Expect = 3e-15
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Frame = +3
Query: 126 DDLLNFK---LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLE-GNV 293
DD FK LI P E Y GG F +F V YP +PP+V+ T ++HPN+ + G +
Sbjct: 30 DDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEI 89
Query: 294 CLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQS 428
CL+IL+ W P T+ S+ + L P P+ PLN ++ + L+S
Sbjct: 90 CLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRS 134
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 75.8 bits (178), Expect = 2e-14
Identities = 31/95 (32%), Positives = 52/95 (54%)
Frame = +3
Query: 174 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVY 353
Y G F + ++PH PPK T ++HPN+ G +C+N L++DW P L + ++
Sbjct: 54 YENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLS 113
Query: 354 GLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 458
++ L +EP PE LN++A L N + +H +
Sbjct: 114 VVRCLLIEPFPESALNEQAGKMLLENYDEYARHAR 148
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 75.8 bits (178), Expect = 2e-14
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Frame = +3
Query: 150 IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR------ 311
II P + Y GG F NYP+ PP V+ + ++HPN+ +G VC++IL
Sbjct: 41 IIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDP 100
Query: 312 -------EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 470
E W PV TV SI+ + + PN E P N EAA E + R F++ V R +R
Sbjct: 101 SGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVR 160
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 75.4 bits (177), Expect = 3e-14
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Frame = +3
Query: 126 DDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCL 299
DDL F + P + Y+GG + ++ YP++ P V +YHPN+D G VCL
Sbjct: 27 DDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCL 86
Query: 300 NILREDWKPVL-TVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 458
+++ + W P+ +N L L L PNP DP N EAA L +R +E V+
Sbjct: 87 DVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVK 140
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 74.5 bits (175), Expect = 5e-14
Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Frame = +3
Query: 150 IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR------ 311
I+ P + Y GG F NYP PP V + ++HPN+ +G VC++IL
Sbjct: 42 IMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDP 101
Query: 312 -------EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 470
E W PV TV SIV + + PN E P N EAA E + NR F + V R +R
Sbjct: 102 HGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVR 161
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 74.1 bits (174), Expect = 6e-14
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Frame = +3
Query: 150 IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR------ 311
II P + Y GG F NYP+ PP V+ + ++HPN+ +G VC++IL
Sbjct: 73 IIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDP 132
Query: 312 -------EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 470
E W PV TV SI+ + + PN E P N EAA E + R F++ V R +R
Sbjct: 133 SGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVR 192
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 73.7 bits (173), Expect = 8e-14
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +3
Query: 174 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRED--WKPVLTVNSI 347
+ GG F + +YP +PPK K +HPN+ G VCL+IL ED W+P +TV I
Sbjct: 54 WEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQI 113
Query: 348 VYGLQYLFLEPNPEDP 395
+ G+Q L PNP DP
Sbjct: 114 LVGIQDLLDTPNPADP 129
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 70.1 bits (164), Expect = 1e-12
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Frame = +3
Query: 117 PDPDDLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P P+++ ++ + G Y G F S + P YP+EPPK+ +T ++HPNI G +
Sbjct: 54 PSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEI 113
Query: 294 CLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPL--NKEAADELQSNRRLFEQ 449
++IL W LT+N ++ L + NP +PL + AA Q +R+ +E+
Sbjct: 114 FVDILGSRWSSALTINLVL--LSICSILSNPVEPLLVSNHAARLYQKDRKAYEK 165
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 67.7 bits (158), Expect = 5e-12
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 117 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P D++ F ++I P + Y GG F + YP PKV+ T +YHPNID G +
Sbjct: 29 PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRI 88
Query: 294 CLNILREDWKPVLTVNSIVYGLQYL 368
CL+IL++ W P L + +++ L+Y+
Sbjct: 89 CLDILKDKWSPALQIRTVL--LRYM 111
>At4g36800.1 68417.m05220 RUB1-conjugating enzyme, putative (RCE1)
this gene is frameshifted and may be a pseudogene;
identical over first 79 amino acids to RUB1 conjugating
enzyme [Arabidopsis thaliana] GI:6635457
Length = 113
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +3
Query: 36 KKASAAQLXITKALNXLNLPKTCNTEFPD-PDDLLNFKLIICPDEGFYRGGKFV 194
KK SA +L + K ++ LNLP +C+ FP+ DDL+NF++ I PD+G+Y G FV
Sbjct: 26 KKQSAGELRLHKDISELNLPSSCSISFPNGKDDLMNFEVSIKPDDGYYHNGTFV 79
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 50.0 bits (114), Expect = 1e-06
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
Frame = +3
Query: 12 SPSRRRLTKKASAAQLXITKALNXLNLPKTCNTEFPDPDDLLNFKLIICPDEG-FYRGGK 188
+PSR+ L+K A + K L+ L D+L + + + G Y
Sbjct: 6 APSRKALSKIACNR---LQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYANET 62
Query: 189 FVFSFKVGPNYPHEPPKVK-CETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYG-LQ 362
+ + +YP E P+V A HP+I G++CL+IL + W P +TVNS+ L
Sbjct: 63 YQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILS 122
Query: 363 YLFLEPNPEDPLNKE 407
L P + P + +
Sbjct: 123 MLSSSPAKQRPADND 137
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 47.6 bits (108), Expect = 6e-06
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Frame = +3
Query: 12 SPSRRRLTKKASAAQLXITKALNXLNLPKTCNTEFPDPDDLLNFKLIICPDEG-FYRGGK 188
SPSR+ L+K A + K L+ + + D+L + + + G Y
Sbjct: 6 SPSRKALSKIACNR---LQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYANET 62
Query: 189 FVFSFKVGPNYPHEPPKVK-CETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYG-LQ 362
+ + +YP E P+V A HP+I G++CL+IL + W P +TV+S+ L
Sbjct: 63 YNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILS 122
Query: 363 YLFLEPNPEDPLNKE 407
L P + P + +
Sbjct: 123 MLSSSPEKQRPTDND 137
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 47.6 bits (108), Expect = 6e-06
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +3
Query: 117 PDPDDLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P P+D+L + ++ EG + GG + K P YP++PP + T + + +
Sbjct: 29 PSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFMTQKKI 86
Query: 294 CLNIL---REDWKPVLTVNSIVYGLQYLFLEPNP 386
CL++ E W P+ +V+SI+ GL ++ +P
Sbjct: 87 CLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 47.2 bits (107), Expect = 8e-06
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +3
Query: 117 PDPDDLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 293
P P+D+L + ++ EG + GG + K P YP++PP + T + + +
Sbjct: 29 PSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQKKI 86
Query: 294 CLNIL---REDWKPVLTVNSIVYGLQYLFLEPNP 386
CL++ E W P+ +V+SI+ GL ++ +P
Sbjct: 87 CLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 47.2 bits (107), Expect = 8e-06
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +3
Query: 9 GSPSRRRLTKKASAAQLXITKALNXLNLPKTCNTEFPDPDDLLNFKLIICPDEG-FYRGG 185
G+PSR+ L+K A+ + K L + + D+L + + + G Y
Sbjct: 5 GAPSRKTLSKIATNR---LQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYAND 61
Query: 186 KFVFSFKVGPNYPHEPPKVK-CETAVYHPNIDLEGNVCLNILREDWKPVLTVNSI 347
+ +YP E P+V A HP+I G++CL+IL + W P +TV+SI
Sbjct: 62 TYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSI 116
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 44.4 bits (100), Expect = 6e-05
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 87 NLPKTCNTEFPDPD-DLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETA-- 257
NLP T + DLL L+ P Y G F F + P YPHEPP V +
Sbjct: 677 NLPNTIYVRVCEERMDLLRAALVGAPGTP-YHDGLFFFDIMLPPQYPHEPPMVHYHSGGM 735
Query: 258 VYHPNIDLEGNVCLNIL 308
+PN+ G VCL++L
Sbjct: 736 RLNPNLYESGRVCLSLL 752
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 216 NYPHEPPKVKCE-TAVYHPNIDLEGNVCLNILREDWKPVLTVNSI 347
+YP E P+V + A HP+I G++CL++L + W P + ++SI
Sbjct: 72 HYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSI 116
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Frame = +3
Query: 174 YRGGKFVFSFKVGPNYPHEPPKVKCETAVY--HPNIDLEGNVCLNIL-------REDWKP 326
Y+ G F F F + +YP PP + + +PN+ EG VCL++L E W P
Sbjct: 894 YQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDP 953
Query: 327 -VLTVNSIVYGLQYLFLEPNP 386
++ ++ LQ L L P
Sbjct: 954 KSSSILQVLVSLQGLVLNSKP 974
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 37.5 bits (83), Expect = 0.007
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Frame = +3
Query: 87 NLPKTCNTEFPDPD-DLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEPPKVKCETA- 257
NLP+T + DLL + +I EG Y G F F + YP PPKV +
Sbjct: 620 NLPETIFVRACESRIDLL--RAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGG 677
Query: 258 -VYHPNIDLEGNVCLNIL-------REDWKP-VLTVNSIVYGLQYLFLEPNP 386
+PN+ G VCL+++ RE W P T+ ++ +Q L L P
Sbjct: 678 LRINPNLYKCGKVCLSLISTWTGKKREKWLPKESTMLQLLVSIQALILNEKP 729
Score = 35.1 bits (77), Expect = 0.035
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Frame = +3
Query: 129 DLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEPPKVKCETA--VYHPNIDLEGNVCL 299
DLL + +I EG Y G F F + YP PP V + +PN+ G VCL
Sbjct: 301 DLL--RAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCL 358
Query: 300 NIL-------REDWKP-VLTVNSIVYGLQYLFLEPNP 386
++L RE W P T+ ++ +Q L L P
Sbjct: 359 SLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKP 395
>At4g08878.1 68417.m01463 inorganic phosphate transporter, putative
similar to inorganic phosphate transporter (GI:3869190)
[Arabidopsis thaliana]
Length = 280
Score = 35.5 bits (78), Expect = 0.026
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 105 NTEFPDPDDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYP 224
N E D F L IC E ++ +FVFSF GPNYP
Sbjct: 240 NKEIFTEVDEKRFALTICQSENWF--SRFVFSFNFGPNYP 277
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 32.3 bits (70), Expect = 0.25
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Frame = +3
Query: 174 YRGGKFVFSFKVGPNYPHEPPKVKCETA--VYHPNIDLEGNVCLNIL-------REDWKP 326
Y G F F YP PP V + +PN+ G VCL++L RE W P
Sbjct: 376 YHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIP 435
Query: 327 -VLTVNSIVYGLQYLFLEPNP 386
T+ ++ +Q L L P
Sbjct: 436 NTSTMLQVLVSIQGLILNQKP 456
>At2g25800.1 68415.m03096 expressed protein
Length = 996
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +1
Query: 349 CTVSSIYSWNQTLKIPSTRKQRTSSKATGDFSNNTFRELCEAATSAHLISND 504
CT S + W + K P+T+K+ + ++ ++C S H I ++
Sbjct: 703 CTTGSKFQWKKKEKTPTTQKRESQVSVMNGENSFGVTQICVRINSLHKIRSE 754
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +3
Query: 150 IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV---CLNILREDW 320
I+ P Y G F G YP PP V+ +T + ++ E V L + +W
Sbjct: 51 ILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNW 110
Query: 321 KPVLTVNSIVYGLQ 362
+ T+ I+ L+
Sbjct: 111 RREYTMEDILVKLK 124
>At4g10520.1 68417.m01724 subtilase family protein contains
similarity to subtilase; SP1 GI:9957714 from [Oryza
sativa]
Length = 756
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 207 VGPNYPHEPPKVKCETAVYHPNIDLEGNVCL 299
VG YP P CE +PN +EG V L
Sbjct: 374 VGLTYPESPLSGDCEKLSANPNSTMEGKVVL 404
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +3
Query: 120 DPDDLLNFK---LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGN 290
D DD+L I+ P Y G F G +YP PP V+ ++ + ++ E
Sbjct: 38 DADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENG 97
Query: 291 V 293
V
Sbjct: 98 V 98
>At1g24706.1 68414.m03104 expressed protein
Length = 1781
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 266 MINCCFTFDFGRLVRIIWSYLKAKY 192
MI CC ++ GRL R ++ LK Y
Sbjct: 1069 MICCCTEYEVGRLGRFLFETLKIAY 1093
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,957,912
Number of Sequences: 28952
Number of extensions: 247136
Number of successful extensions: 718
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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