Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_J10
         (414 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VV12 Cluster: CG13066-PA; n=1; Drosophila melanogaste...    38   0.062
UniRef50_Q9VV08 Cluster: CG13069-PA; n=1; Drosophila melanogaste...    38   0.081
UniRef50_Q8IQU6 Cluster: CG32213-PA; n=4; Drosophila melanogaste...    36   0.43 
UniRef50_Q6IKD1 Cluster: HDC12856; n=1; Drosophila melanogaster|...    34   1.0  
UniRef50_A7NDC7 Cluster: Major facilitator superfamily; n=10; Fr...    33   1.8  
UniRef50_O45461 Cluster: Putative uncharacterized protein srh-13...    33   1.8  
UniRef50_A7T178 Cluster: Predicted protein; n=2; Nematostella ve...    33   1.8  
UniRef50_Q7SGA1 Cluster: Putative uncharacterized protein NCU027...    33   2.3  
UniRef50_Q4DN11 Cluster: Putative uncharacterized protein; n=3; ...    33   3.1  
UniRef50_Q45V96 Cluster: Tentative cuticle protein; n=1; Myzus p...    33   3.1  
UniRef50_UPI00005A3057 Cluster: PREDICTED: hypothetical protein ...    32   4.0  
UniRef50_A5UPI6 Cluster: Putative uncharacterized protein; n=1; ...    32   4.0  
UniRef50_A4BQN8 Cluster: DNA polymerase III subunit delta; n=3; ...    32   4.0  
UniRef50_Q05TJ1 Cluster: Putative uncharacterized protein; n=1; ...    32   5.3  
UniRef50_Q8G4X8 Cluster: Putative uncharacterized protein; n=3; ...    31   7.1  
UniRef50_Q478N6 Cluster: Putative uncharacterized protein; n=1; ...    31   7.1  
UniRef50_P24152 Cluster: Extensin precursor; n=9; Poaceae|Rep: E...    31   7.1  

>UniRef50_Q9VV12 Cluster: CG13066-PA; n=1; Drosophila
           melanogaster|Rep: CG13066-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 95

 Score = 38.3 bits (85), Expect = 0.062
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
 Frame = +3

Query: 60  FLITMLALFACAAADPYVVPLPYAATAGY--PLSYVS-SLSVPTVYSSAFTGFY-PQIA- 224
           F + + ALFA AAA+P +  L Y A   Y  PL+Y S   + P  Y++A+T  Y P +A 
Sbjct: 7   FAVVLCALFAAAAANPGL--LAYNAPLAYSTPLAYSSLPAAAPLAYTAAYTPAYAPYVAP 64

Query: 225 YANDY 239
           YA+ Y
Sbjct: 65  YASSY 69


>UniRef50_Q9VV08 Cluster: CG13069-PA; n=1; Drosophila
           melanogaster|Rep: CG13069-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 97

 Score = 37.9 bits (84), Expect = 0.081
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +3

Query: 48  MFKAFLITMLALFACAAADPYVV-PLPYAATAGYPLSYVSSLSVPTVYSSAFTGFYPQIA 224
           MFK F + + AL AC AA P +V PL Y+A    PL  V++     VYS  + G +    
Sbjct: 1   MFKFFAVALFALIACVAAKPGIVAPLAYSA----PL--VAAAPAAAVYSREYHGNFAAPY 54

Query: 225 YANDYI 242
            A+ Y+
Sbjct: 55  VASPYV 60


>UniRef50_Q8IQU6 Cluster: CG32213-PA; n=4; Drosophila
           melanogaster|Rep: CG32213-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 154

 Score = 35.5 bits (78), Expect = 0.43
 Identities = 23/62 (37%), Positives = 33/62 (53%)
 Frame = +3

Query: 48  MFKAFLITMLALFACAAADPYVVPLPYAATAGYPLSYVSSLSVPTVYSSAFTGFYPQIAY 227
           MFK + + +LAL ACAAA P ++  P A TA  PL+Y +  +V    +   T    Q+  
Sbjct: 26  MFK-YAVVVLALVACAAAKPGLLGAPLAYTA--PLAYSAPAAVVAAPAPVVTATSSQVIA 82

Query: 228 AN 233
            N
Sbjct: 83  RN 84


>UniRef50_Q6IKD1 Cluster: HDC12856; n=1; Drosophila
           melanogaster|Rep: HDC12856 - Drosophila melanogaster
           (Fruit fly)
          Length = 129

 Score = 34.3 bits (75), Expect = 1.0
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = +1

Query: 82  SSPARRPTRMWCPCRTLQLPATPFPTCHPYQYLPSTALRSPASTHKSHTQMI 237
           ++P+  P    CPC T  L   P P+C  +   PS ALR  +++HK H + +
Sbjct: 11  ATPSSEPPN--CPCSTTLLQ--PAPSCTTFLTQPSLALRWRSTSHKVHDRTL 58


>UniRef50_A7NDC7 Cluster: Major facilitator superfamily; n=10;
           Francisella tularensis|Rep: Major facilitator
           superfamily - Francisella tularensis subsp. holarctica
           FTA
          Length = 418

 Score = 33.5 bits (73), Expect = 1.8
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
 Frame = +3

Query: 63  LITMLALFACAAADPYVVPLPYAATAGYPLSYVS--SLSVPTVYSSAFTGFYPQIAYAND 236
           L+  +AL A A    Y+V L Y +     L Y    SL+V TV+S  F+   P     +D
Sbjct: 234 LLLAIALSAYANIMYYLV-LSYLSNHFVELHYSEFFSLAVVTVFSLIFSFSAPLWGLLSD 292

Query: 237 YIFRK*NVKVNTYIWNFFCY 296
           Y+ RK  +K + +I+  F Y
Sbjct: 293 YLGRKPLIKFSIWIYLIFAY 312


>UniRef50_O45461 Cluster: Putative uncharacterized protein srh-136;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein srh-136 - Caenorhabditis elegans
          Length = 330

 Score = 33.5 bits (73), Expect = 1.8
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +3

Query: 15  PVELSKXQSLKMFKAFLITMLALFACAAADPYVVPLPYAATAGYPLSYVSSLSVPTV 185
           P  +SK +   +   F I  +  +      P+V+   YAA AGYPL  +  L VPT+
Sbjct: 42  PSNMSKVKFSMLVMHFTIFWIDFYWNILCIPFVI---YAAVAGYPLGVIVYLGVPTI 95


>UniRef50_A7T178 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 235

 Score = 33.5 bits (73), Expect = 1.8
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +1

Query: 130 LQLPATPFPT--CHPYQYLPSTALRSPASTHKSHTQMIISFVNKMLK*IHTSGTSSVT 297
           L  P+TP PT  C+ + Y PST    P  TH  +T    ++  ++   +HT  T +VT
Sbjct: 110 LHTPSTPTPTHACYTHAYTPST----PTPTHAEYTH---AYTRRVHPRLHTPSTPTVT 160


>UniRef50_Q7SGA1 Cluster: Putative uncharacterized protein
           NCU02749.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU02749.1 - Neurospora crassa
          Length = 526

 Score = 33.1 bits (72), Expect = 2.3
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +1

Query: 139 PATPFPTCHPYQYLPSTALRSPASTHKSHTQMIISFVNKMLK*IHTSGTSSVTINKIYCC 318
           P  PFP   P+   PS +   P STH        ++VN  L   +T+G  +V  +K + C
Sbjct: 158 PPRPFPP--PFLSPPSGSFSDPLSTHDRSRDRRAAYVNGKLIRGYTNGDDAVFASKYFVC 215


>UniRef50_Q4DN11 Cluster: Putative uncharacterized protein; n=3;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 1690

 Score = 32.7 bits (71), Expect = 3.1
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +3

Query: 60  FLITMLALFACAAADPYVVPLPYAATAGYPLSYVSSLSVPTVYS-SAFTGFYPQIA 224
           FL+ + A+         VVPLP A     P   VS   +P + S +AF  FY  +A
Sbjct: 558 FLVDLAAIIGYRETGEMVVPLPSALPPHLPPPEVSEFGMPEIASAAAFASFYRTLA 613


>UniRef50_Q45V96 Cluster: Tentative cuticle protein; n=1; Myzus
           persicae|Rep: Tentative cuticle protein - Myzus persicae
           (Peach-potato aphid)
          Length = 118

 Score = 32.7 bits (71), Expect = 3.1
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 84  FACAAADPYVVPL-PYAATAGYPLSYVSSLSVPTVYSSAFTGFYPQIAYAND 236
           +  A A  Y  P+ PYA +A YP SY    + PT Y++     YP  AYA+D
Sbjct: 44  YIAAPALAYSAPVYPYAYSA-YPYSYSYPAAYPTAYAA-----YPSYAYAHD 89


>UniRef50_UPI00005A3057 Cluster: PREDICTED: hypothetical protein
           XP_859218; n=1; Canis lupus familiaris|Rep: PREDICTED:
           hypothetical protein XP_859218 - Canis familiaris
          Length = 332

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 85  SPARRPTRMWCPCRTLQLPATPFPTCHPYQYLPSTALRSPA 207
           SP   P    CPC +L+L     P  HP  +  S+  R PA
Sbjct: 83  SPEAAPGGASCPCHSLELSQLMLPLVHPKPWFASSRGRVPA 123


>UniRef50_A5UPI6 Cluster: Putative uncharacterized protein; n=1;
           Roseiflexus sp. RS-1|Rep: Putative uncharacterized
           protein - Roseiflexus sp. RS-1
          Length = 605

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +1

Query: 100 PTRMWCPCRTLQLPATPFPTCHPYQYLPSTALRSPAST 213
           PTRM  P RT     TP PT  P   +  TA R+P+ T
Sbjct: 382 PTRMPSPTRTPSPTRTPSPTREPAAGIELTATRTPSPT 419


>UniRef50_A4BQN8 Cluster: DNA polymerase III subunit delta; n=3;
           Ectothiorhodospiraceae|Rep: DNA polymerase III subunit
           delta - Nitrococcus mobilis Nb-231
          Length = 340

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 83  LRLRGGRPVCG-APAVRCNCRLPPFLRVILISTYRL 187
           LRL GG+P  G A A++  CR PP   ++L+++ RL
Sbjct: 83  LRLPGGKPGAGGAQALQAYCRAPPADTLLLVASARL 118


>UniRef50_Q05TJ1 Cluster: Putative uncharacterized protein; n=1;
           Synechococcus sp. RS9916|Rep: Putative uncharacterized
           protein - Synechococcus sp. RS9916
          Length = 75

 Score = 31.9 bits (69), Expect = 5.3
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +1

Query: 127 TLQLPATPFPTCHPYQYLPSTALRSPASTHKSHTQMI 237
           TLQ P+TP P   P Q+ PS+A R   +    HT MI
Sbjct: 19  TLQ-PSTPIPAIAPMQWQPSSADRFNGAHQHGHTGMI 54


>UniRef50_Q8G4X8 Cluster: Putative uncharacterized protein; n=3;
           Bifidobacterium longum|Rep: Putative uncharacterized
           protein - Bifidobacterium longum
          Length = 423

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +3

Query: 66  ITMLALFACAAADPYVVPLPYAATAGYPLSYVSSLSVPTVYSSAFTGFYP 215
           +T  A  A A A P   P P A  + YP +  +  SVP VY S     YP
Sbjct: 101 VTPAAAPAPAPAAPAPAPAPAAPNSPYPGAAPAGGSVPPVYGSVSAPVYP 150


>UniRef50_Q478N6 Cluster: Putative uncharacterized protein; n=1;
           Dechloromonas aromatica RCB|Rep: Putative
           uncharacterized protein - Dechloromonas aromatica
           (strain RCB)
          Length = 183

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +1

Query: 70  QCWLSSPARRPTRMWCPCRTLQLPATPFPTCHPYQYLPSTA 192
           Q W   PA     +  PC T+Q  A   P   PYQY P  A
Sbjct: 85  QLWGDIPAGERRYLNLPCGTMQFLADDDPDIGPYQYCPLIA 125


>UniRef50_P24152 Cluster: Extensin precursor; n=9; Poaceae|Rep:
           Extensin precursor - Sorghum bicolor (Sorghum) (Sorghum
           vulgare)
          Length = 283

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +1

Query: 88  PARRPTRMWCPCRTLQLPATPFPTCHPYQYLPSTALRSPASTHKSHT 228
           PA +P     P      P TP+P  HP  Y P+     PA T  ++T
Sbjct: 219 PATKPPTS-TPTHPKPTPHTPYPQAHPPTYKPAPKPSPPAPTPPTYT 264


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 322,112,374
Number of Sequences: 1657284
Number of extensions: 6239194
Number of successful extensions: 19831
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 19170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19800
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)