Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_J08
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   1.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   6.0  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -3

Query: 451 MGIIVRCNKPYSFFTLCTIK-IEIISFLE*EFLKVF 347
           +GI  + NK YSF  L T+  + I+S ++  +LK +
Sbjct: 16  LGIGPKSNKIYSFLLLTTLTLLVILSSIDRPYLKSY 51


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +2

Query: 281 WIYVALNRKADVFASNKGSTSTENFQ 358
           WIY+A NR+         + S++N++
Sbjct: 317 WIYLAFNRELPRLLLRHYTASSKNYR 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,855
Number of Sequences: 336
Number of extensions: 3316
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)