Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_J05
         (356 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   5.0  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    20   8.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   8.7  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 49  GYPAAKLRSYHWSV 90
           G  A+KL S+HW +
Sbjct: 233 GMAASKLNSFHWHI 246


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 85  TSGRIVILLQDIHIGRILIFECDMTXYH 2
           TS   V+L+ D+H    +IF  DM   H
Sbjct: 162 TSMNFVLLIGDLHTSIYIIF-FDMFYQH 188


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 151 RRFRNGFKEGKPT 189
           R+F   F+ GKP+
Sbjct: 113 RKFETSFESGKPS 125


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax
          protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +2

Query: 47 VDILQQNYD 73
          +D+LQ+NYD
Sbjct: 1  MDVLQKNYD 9


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,480
Number of Sequences: 336
Number of extensions: 873
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)