Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_J03
         (562 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071203-1|AAL48825.1|  157|Drosophila melanogaster RE24457p pro...   163   1e-40
AE014298-1419|AAF46561.1|  157|Drosophila melanogaster CG2968-PA...   163   1e-40
AY052109-1|AAK93533.1|  550|Drosophila melanogaster SD05564p pro...    28   9.9  
AF495536-1|AAM18058.1|  550|Drosophila melanogaster prolyl 4-hyd...    28   9.9  
AE014297-4605|AAF57053.2|  550|Drosophila melanogaster CG31022-P...    28   9.9  

>AY071203-1|AAL48825.1|  157|Drosophila melanogaster RE24457p
           protein.
          Length = 157

 Score =  163 bits (396), Expect = 1e-40
 Identities = 82/126 (65%), Positives = 100/126 (79%)
 Frame = +1

Query: 13  ARRLQVRNYADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVL 192
           AR  Q R+Y+D     EM LTFAA NK FYD  VV+QIDVPSFSG+FGIL KHVPTLAVL
Sbjct: 15  ARLAQNRSYSD-----EMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVL 69

Query: 193 RPGVVTILENDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSE 372
           +PGVV ++ENDGK  K FVSSG++TVN+DSSVQVLAEEAH +E ID + A++ L+K QS+
Sbjct: 70  KPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQ 129

Query: 373 FNSASN 390
            +SA +
Sbjct: 130 LSSAGD 135


>AE014298-1419|AAF46561.1|  157|Drosophila melanogaster CG2968-PA
           protein.
          Length = 157

 Score =  163 bits (396), Expect = 1e-40
 Identities = 82/126 (65%), Positives = 100/126 (79%)
 Frame = +1

Query: 13  ARRLQVRNYADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVL 192
           AR  Q R+Y+D     EM LTFAA NK FYD  VV+QIDVPSFSG+FGIL KHVPTLAVL
Sbjct: 15  ARLAQNRSYSD-----EMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVL 69

Query: 193 RPGVVTILENDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSE 372
           +PGVV ++ENDGK  K FVSSG++TVN+DSSVQVLAEEAH +E ID + A++ L+K QS+
Sbjct: 70  KPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQ 129

Query: 373 FNSASN 390
            +SA +
Sbjct: 130 LSSAGD 135


>AY052109-1|AAK93533.1|  550|Drosophila melanogaster SD05564p
           protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +1

Query: 79  AAGNKVFYDKQVVKQIDVPSFSGAFGI--LPKHVPTLAVLRPGVVTILE 219
           A GNK FY+K++ +Q+ +    G  G   +PK    +A   P +  + E
Sbjct: 250 ANGNKRFYEKEIAQQLQLRKMKGDDGTDEMPKSDLPVAKSDPAIFDMTE 298


>AF495536-1|AAM18058.1|  550|Drosophila melanogaster prolyl
           4-hydroxylase alpha-relatedprotein PH4[alpha]EFB
           protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +1

Query: 79  AAGNKVFYDKQVVKQIDVPSFSGAFGI--LPKHVPTLAVLRPGVVTILE 219
           A GNK FY+K++ +Q+ +    G  G   +PK    +A   P +  + E
Sbjct: 250 ANGNKRFYEKEIAQQLQLRKMKGDDGTDEMPKSDLPVAKSDPAIFDMTE 298


>AE014297-4605|AAF57053.2|  550|Drosophila melanogaster CG31022-PA
           protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +1

Query: 79  AAGNKVFYDKQVVKQIDVPSFSGAFGI--LPKHVPTLAVLRPGVVTILE 219
           A GNK FY+K++ +Q+ +    G  G   +PK    +A   P +  + E
Sbjct: 250 ANGNKRFYEKEIAQQLQLRKMKGDDGTDEMPKSDLPVAKSDPAIFDMTE 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,439,791
Number of Sequences: 53049
Number of extensions: 337397
Number of successful extensions: 645
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)