Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J01
(744 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g04545.1 68417.m00665 Ulp1 protease family protein contains P... 31 1.1
At1g13080.1 68414.m01516 cytochrome P450 family protein identica... 31 1.1
At1g79680.1 68414.m09293 wall-associated kinase, putative simila... 29 4.3
At1g69260.1 68414.m07939 expressed protein 28 5.7
At4g21170.1 68417.m03062 pentatricopeptide (PPR) repeat-containi... 28 7.5
At3g50050.1 68416.m05472 aspartyl protease family protein contai... 28 7.5
At4g37080.2 68417.m05252 expressed protein contains Pfam profile... 27 9.9
At4g37080.1 68417.m05253 expressed protein contains Pfam profile... 27 9.9
At1g71260.1 68414.m08224 expressed protein 27 9.9
>At4g04545.1 68417.m00665 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 882
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -1
Query: 426 GVGGELDNSAGVLGIV---GVDIQASTDNSSALHDDLVTVSRSSRNAVQDFDRQNVAQVE 256
G+ G D+ AGV GI+ GV TD + D + R + + D D Q+ ++
Sbjct: 442 GLAGGSDSVAGVCGIIGGLGVLDGIKTDTLKEVRGDDASQKRRKKKSSSDMDAQSTRPLK 501
Query: 255 RVE 247
RV+
Sbjct: 502 RVK 504
>At1g13080.1 68414.m01516 cytochrome P450 family protein identical
to gb|D78605 cytochrome P450 monooxygenase from
Arabidopsis thaliana and is a member of the PF|00067
Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and
gb|T43466 come from this gene
Length = 502
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +1
Query: 289 LNSVTGAPRYC-HKIVMKSGTVVRTCLDVNPNDSQHTCRVVELASNTAIADSAKVKSCAV 465
L+ + G P C HK+ +K G +V L P VV ++S+ A K
Sbjct: 44 LHHLAGLPHRCFHKLSIKYGPLVFLRLGSVP--------VVVISSSEAAEAVLKTNDLEC 95
Query: 466 CNKDNCNGAGSISFSLPLATFALIATYF 549
C++ G+G +S+ TFA Y+
Sbjct: 96 CSRPKTVGSGKLSYGFKDITFAPYGEYW 123
>At1g79680.1 68414.m09293 wall-associated kinase, putative similar
to wall-associated kinase 2 GI:4826399 from [Arabidopsis
thaliana]
Length = 769
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 412 LASNTAIADSAKVKSCAVCNKDNCNGAGSISFSLP 516
L N DS K+ ++ N +CNG G SLP
Sbjct: 168 LYCNARYGDSEYCKNISIMNDTSCNGIGCCKASLP 202
>At1g69260.1 68414.m07939 expressed protein
Length = 345
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -1
Query: 519 QWEREGNRSSSVTVVLVAHSAGLDLRAVSDRGVGGELDNSAGVLGIVG-VDIQASTDNSS 343
+W N+S +L HSAGLD VS +GG +AG V ++ +AS+D +
Sbjct: 179 RWSATANKSG----LLRQHSAGLDSLQVSGESLGG--GRAAGSSSSVSELETKASSDEAR 232
Query: 342 AL 337
+L
Sbjct: 233 SL 234
>At4g21170.1 68417.m03062 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 534
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +1
Query: 265 RNILPVEVLNSVTGAPRYCHKIVMKSGTVVRTCLDVNPNDSQHTCRVVELASNTAIADSA 444
R+ L V + R C K + +T L P+ H CRV+E+A+ + + + A
Sbjct: 64 RSTLTSPVFLQILRETRKCPKTTLDFFDFAKTHLRFEPDLKSH-CRVIEVAAESGLLERA 122
Query: 445 KV 450
++
Sbjct: 123 EM 124
>At3g50050.1 68416.m05472 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease
Length = 632
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 142 CIKCYQCNSEQDKNCGDPFKSAKPPVECN 228
C C QC QD S PV+CN
Sbjct: 121 CSDCEQCGKHQDPKFQPEMSSTYQPVKCN 149
>At4g37080.2 68417.m05252 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547
Length = 610
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -1
Query: 294 VQDFDRQNVAQVERVEVNRILGVAFYWGFGALERVPAVLILFTVTLVALDAI 139
+QD D+ + V+R L AF GAL R+P+ L T+ L+A A+
Sbjct: 60 LQDVDKLKRKLRQEENVHRALERAFTRPLGALPRLPSYLPRHTLELLAEVAV 111
>At4g37080.1 68417.m05253 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547
Length = 597
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -1
Query: 294 VQDFDRQNVAQVERVEVNRILGVAFYWGFGALERVPAVLILFTVTLVALDAI 139
+QD D+ + V+R L AF GAL R+P+ L T+ L+A A+
Sbjct: 47 LQDVDKLKRKLRQEENVHRALERAFTRPLGALPRLPSYLPRHTLELLAEVAV 98
>At1g71260.1 68414.m08224 expressed protein
Length = 238
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 625 VGLGVPNSVLSAPNLXLTXKNSKEFIVNLXSFSYICPHL 741
+ L V NS+L + + EF V +FS+ PH+
Sbjct: 165 ISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHI 203
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,195,093
Number of Sequences: 28952
Number of extensions: 302034
Number of successful extensions: 778
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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