Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_I24
(627 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 272 3e-72
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 257 2e-67
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 151 3e-62
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 216 3e-55
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 208 8e-53
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 180 2e-44
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 167 2e-40
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 166 4e-40
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 165 1e-39
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 156 4e-37
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 142 5e-33
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 117 2e-25
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 67 6e-18
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 92 1e-17
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 92 1e-17
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 87 2e-16
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 58 7e-14
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 2e-12
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 6e-10
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 58 1e-07
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 55 1e-06
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 55 2e-06
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 51 2e-05
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 44 0.002
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 32 0.004
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 33 0.044
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 34 2.4
UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR, substrat... 32 9.8
UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1; ... 32 9.8
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 272 bits (668), Expect = 3e-72
Identities = 125/182 (68%), Positives = 140/182 (76%)
Frame = +1
Query: 82 LKLXXTNNTSSRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 261
+K+ RYQVKF+ RREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+T Q
Sbjct: 4 VKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDITVQ 63
Query: 262 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 441
+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAAY TG
Sbjct: 64 IAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCT 123
Query: 442 XXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXY 621
E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+KRFP Y
Sbjct: 124 EVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGY 183
Query: 622 DA 627
A
Sbjct: 184 SA 185
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 257 bits (629), Expect = 2e-67
Identities = 116/171 (67%), Positives = 133/171 (77%)
Frame = +1
Query: 115 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 294
RYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 295 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 474
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 475 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDA 627
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFP YD+
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDS 185
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 151 bits (367), Expect(2) = 3e-62
Identities = 67/86 (77%), Positives = 75/86 (87%)
Frame = +1
Query: 82 LKLXXTNNTSSRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 261
+K+ R+QVKFK RREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+TCQ
Sbjct: 4 VKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDITCQ 63
Query: 262 VAYSRIEGDHIVCAAYSHELPRYGVK 339
+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 64 IAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 109 bits (263), Expect(2) = 3e-62
Identities = 49/57 (85%), Positives = 51/57 (89%)
Frame = +1
Query: 457 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDA 627
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFP YDA
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDA 154
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 216 bits (528), Expect = 3e-55
Identities = 102/170 (60%), Positives = 120/170 (70%)
Frame = +1
Query: 115 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 294
RYQVK + RREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +
Sbjct: 15 RYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVV 74
Query: 295 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 474
V +AYSHELPRYG+KVGLTNYAAAY+TG +YNVE
Sbjct: 75 VASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE 134
Query: 475 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYD 624
+ F+ LD+GLARTTTG+++F MKG DGG+NVPHS RF +D
Sbjct: 135 -EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFD 183
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 208 bits (508), Expect = 8e-53
Identities = 98/184 (53%), Positives = 120/184 (65%), Gaps = 2/184 (1%)
Frame = +1
Query: 79 SLKLXXTNNTSSRYQVKFKXRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 252
S + T SRYQVKF RR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV
Sbjct: 10 SQSVAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDV 69
Query: 253 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 432
CQV Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y+TG
Sbjct: 70 VCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYE 129
Query: 433 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 612
+Y+VE D F+C+LD GL RT+TGARVF A+KGAVDGGL++PH+ KRF
Sbjct: 130 GKTEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKRF 189
Query: 613 PXYD 624
YD
Sbjct: 190 AGYD 193
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 180 bits (439), Expect = 2e-44
Identities = 86/176 (48%), Positives = 114/176 (64%), Gaps = 6/176 (3%)
Frame = +1
Query: 115 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 294
R+QVK++ RREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+ Q+ ++I GD +
Sbjct: 38 RFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEV 97
Query: 295 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 474
V AAY+HELP +G++ GLTNYAAAY+TG V
Sbjct: 98 VMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRT 157
Query: 475 VDNGPG------AFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYD 624
+ G F+ LDVGLARTTTGARVFG +KGAVDGG+ VPH RFP Y+
Sbjct: 158 KKDDEGDDEERFPFKAILDVGLARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYN 213
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 167 bits (406), Expect = 2e-40
Identities = 76/166 (45%), Positives = 101/166 (60%)
Frame = +1
Query: 124 VKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 303
++ K +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 304 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDN 483
A S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQK 426
Query: 484 GPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXY 621
F+ LD GL RTTTG RVFG +KGA DGG+N+PHS RFP Y
Sbjct: 427 EKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFPGY 472
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 166 bits (403), Expect = 4e-40
Identities = 81/169 (47%), Positives = 108/169 (63%)
Frame = +1
Query: 115 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 294
R+Q KF+ RREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N + CQV Y+ ++GD +
Sbjct: 15 RFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKV 74
Query: 295 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 474
V AA S EL R+G+ GLTNYAAAY+TG + N++
Sbjct: 75 VAAAESTELKRFGLTSGLTNYAAAYATGLLLARRTLKTLKMDKFYEGNKTI---DGNLKT 131
Query: 475 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXY 621
P F LD+GL R+T G RVF A+KGA DGG+++PH+ +RFP +
Sbjct: 132 QRERP--FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRFPGF 178
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 165 bits (400), Expect = 1e-39
Identities = 84/170 (49%), Positives = 101/170 (59%), Gaps = 3/170 (1%)
Frame = +1
Query: 115 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 294
RYQVK++ RREGKTDY ARK L++QDKNKYN K R IVR +N + CQ+A S IEGD I
Sbjct: 15 RYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKI 74
Query: 295 VCAAYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYN 465
+ A S EL RYG+ VGL NYAAAY+TG E
Sbjct: 75 LSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDG 134
Query: 466 VEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 615
+ + + +LDVG+ RTTTG RVF A+KGA DGGLN+PH RFP
Sbjct: 135 DKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFP 184
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 156 bits (379), Expect = 4e-37
Identities = 81/177 (45%), Positives = 103/177 (58%)
Frame = +1
Query: 79 SLKLXXTNNTSSRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTC 258
S KL SR+Q KF+ RRE KTDY R +L+ QDK KY KYRL+ R++N V
Sbjct: 2 SAKLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIA 61
Query: 259 QVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXX 438
Q+ + + GD VC A S ELP+YG+K+GL+NY AAY+TG
Sbjct: 62 QIVVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVF 118
Query: 439 XXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 609
EY + + P F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++ R
Sbjct: 119 KTEITEEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCR 173
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 142 bits (345), Expect = 5e-33
Identities = 74/173 (42%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
Frame = +1
Query: 97 TNNTSSRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 276
T N +QVK + RREGKTDY R ++ QD N + K+RL+VR++ V CQ+ +
Sbjct: 3 TRNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAY 62
Query: 277 IEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXX 456
++GD ++ A S EL RYG+ G TNY+AAY+TG
Sbjct: 63 MDGDRVMVYADSRELERYGINFGATNYSAAYATGFLIGRRALTAMSLDEVYRPKEIDGT- 121
Query: 457 EYNV-EPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 612
Y+V + +D A R +LD+GLAR+T GARVFGA+KGA D GLNVPHS +F
Sbjct: 122 -YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAKF 173
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 117 bits (282), Expect = 2e-25
Identities = 62/129 (48%), Positives = 73/129 (56%)
Frame = +1
Query: 235 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 414
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 415 XXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 594
Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 595 HSIKRFPXY 621
HS KRFP Y
Sbjct: 124 HSEKRFPGY 132
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 66.9 bits (156), Expect(2) = 6e-18
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +1
Query: 115 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 294
RY+V + RREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 295 VCAAYSHEL-PRYGVKVGLTNYAAAYSTG 378
+ AA+S EL ++G K N AAY TG
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 46.4 bits (105), Expect(2) = 6e-18
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +1
Query: 490 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 615
G LDVGL + G+RVF A+KGA+D G+ +PHS + P
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILP 139
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 91.9 bits (218), Expect = 1e-17
Identities = 52/166 (31%), Positives = 83/166 (50%)
Frame = +1
Query: 112 SRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 291
SR+++K + RR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S ++GD
Sbjct: 14 SRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDF 73
Query: 292 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 471
I+ ++Y L + K NY +Y G YN +
Sbjct: 74 ILLSSYLKNLSKLEYKNLTNNYPFSYLLGYYFGKDLIEKVKQSET-----------YNKK 122
Query: 472 PVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 609
N +D+GL R T G + F +MKG+VD G+N+PH+ +
Sbjct: 123 ---NYSSKITAIIDIGLKRATIGNKSFASMKGSVDSGINIPHNYNK 165
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 91.9 bits (218), Expect = 1e-17
Identities = 42/69 (60%), Positives = 50/69 (72%)
Frame = +1
Query: 82 LKLXXTNNTSSRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 261
+K T S R+QVKFK RR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+T Q
Sbjct: 15 VKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQ 74
Query: 262 VAYSRIEGD 288
+ + I GD
Sbjct: 75 IISASIAGD 83
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 87.4 bits (207), Expect = 2e-16
Identities = 63/170 (37%), Positives = 83/170 (48%)
Frame = +1
Query: 106 TSSRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 285
T RY V F+ R EGKTDYY R L+ TP R++VR +N+ + Q+ +EG
Sbjct: 3 TGPRYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEG 55
Query: 286 DHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYN 465
D + AAYS EL YG + + AAY TG +
Sbjct: 56 DSTLVAAYSAELAGYGYEGSTASTPAAYLTGML-------------------------FA 90
Query: 466 VEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 615
V+ ++ G G LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 91 VKALNAGYG--EAILDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 58.0 bits (134), Expect(2) = 7e-14
Identities = 34/91 (37%), Positives = 48/91 (52%)
Frame = +1
Query: 106 TSSRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 285
T RY+V + RRE +TDY+ R RL+ + K RL+ R SNK V Q+ G
Sbjct: 3 TGPRYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNG 55
Query: 286 DHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 378
D + +A+S +L YG + N +AY TG
Sbjct: 56 DDTLASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 41.5 bits (93), Expect(2) = 7e-14
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 490 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 600
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 2e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +1
Query: 223 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 378
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +1
Query: 517 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDA 627
GLARTTTG +VFGA+K VD GL++PHS K FP YD+
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDS 107
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect(2) = 6e-10
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 490 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 615
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
Score = 39.1 bits (87), Expect(2) = 6e-10
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +1
Query: 121 QVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVC 300
+++FK RR G+TDY R R++ R +VR+SN TCQ+ GD ++
Sbjct: 8 RLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDEVII 60
Query: 301 AAYSHEL-PRYG--VKVGLTNYAAAYSTG 378
+ L R+G + + A+Y TG
Sbjct: 61 SVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 58.4 bits (135), Expect = 1e-07
Identities = 34/91 (37%), Positives = 51/91 (56%)
Frame = +1
Query: 106 TSSRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 285
T RY+V F+ RREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EG
Sbjct: 3 TGPRYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEG 55
Query: 286 DHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 378
D +A S EL +YG N AAY TG
Sbjct: 56 DITYSSAVSSELAKYGYTGATGNTTAAYLTG 86
Score = 41.1 bits (92), Expect = 0.021
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 508 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 615
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = +1
Query: 103 NTSSRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPK 216
N + +++F+ +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 30 NANHHAKLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +1
Query: 457 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 612
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRF 93
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/87 (36%), Positives = 46/87 (52%)
Frame = +1
Query: 118 YQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 297
Y+V+FK RREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 298 CAAYSHELPRYGVKVGLTNYAAAYSTG 378
+A S L +G N +AAY TG
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAYLTG 86
Score = 37.1 bits (82), Expect = 0.34
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 508 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 615
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 44.4 bits (100), Expect = 0.002
Identities = 48/163 (29%), Positives = 64/163 (39%), Gaps = 1/163 (0%)
Frame = +1
Query: 130 FKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 306
FK + G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 307 YSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNG 486
L +YGV + N Y G +E NG
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVGYIA-------------------------GIESEKNG 92
Query: 487 PGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 615
+ LD G + G R+ +KG D G+ VPH FP
Sbjct: 93 VES--AVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 32.3 bits (70), Expect(2) = 0.004
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +1
Query: 112 SRYQVKFKXRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 285
S++ VK + R+ T Y R + NK + K+R +N +++ + +S + G
Sbjct: 14 SKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNTNLSGVITFSSLSG 71
Query: 286 DHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 378
D IV A S +L ++G+ N +Y G
Sbjct: 72 DTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
Score = 30.7 bits (66), Expect(2) = 0.004
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 496 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 600
F +D+G R R+ +KG +DGG+ +P S
Sbjct: 121 FLLTIDIGFKRLNEKGRINAFIKGLIDGGIQIPVS 155
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 33.5 bits (73), Expect(2) = 0.044
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +1
Query: 142 REGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL 321
RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S L
Sbjct: 11 REEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHSRYL 63
Query: 322 PRYGVKVGLTNYAAAYSTG 378
G K + A+Y TG
Sbjct: 64 ASKGWKGSRKSIPASYLTG 82
Score = 25.8 bits (54), Expect(2) = 0.044
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 490 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 615
GA + G R T R+ A+KG D G++VP FP
Sbjct: 93 GAKSAIMYTGTRRYTD--RISAALKGVSDAGVDVPIDPSTFP 132
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 34.3 bits (75), Expect = 2.4
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +1
Query: 133 KXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 312
K RREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 313 HELPR 327
L +
Sbjct: 61 KTLKK 65
>UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR,
substrate-binding; n=1; Dechloromonas aromatica RCB|Rep:
Regulatory protein, LysR:LysR, substrate-binding -
Dechloromonas aromatica (strain RCB)
Length = 327
Score = 32.3 bits (70), Expect = 9.8
Identities = 18/80 (22%), Positives = 40/80 (50%)
Frame = +1
Query: 121 QVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVC 300
++K + R+G YY+ + V+ + +Y+ P RL+ +++ + A E H+
Sbjct: 4 RIKSRASRQGNW-YYSNQAFVLDETMRYDLPDLRLVAAIADSGSLTRAA----EQVHLAP 58
Query: 301 AAYSHELPRYGVKVGLTNYA 360
++ SH L + +G+ +A
Sbjct: 59 SSASHRLTQLEAALGIPLFA 78
>UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 503
Score = 32.3 bits (70), Expect = 9.8
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 373 LNMLQHNLSDQPSHHNVATHVNKQRTQYGHLQSESRPP 260
LN LQ +L D PSH T V + Q H Q + PP
Sbjct: 21 LNRLQPSLEDPPSHLQALTKVVMMQHQIPHQQQHALPP 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,464,571
Number of Sequences: 1657284
Number of extensions: 11422877
Number of successful extensions: 28302
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 27245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28277
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -