Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_I24
(627 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 258 2e-68
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 257 3e-68
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 257 3e-68
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 257 3e-68
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 257 3e-68
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 257 3e-68
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 255 1e-67
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 2e-41
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 162 8e-40
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 61 3e-09
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 258 bits (631), Expect = 2e-68
Identities = 118/189 (62%), Positives = 139/189 (73%)
Frame = +1
Query: 61 IFKIWXSLKLXXTNNTSSRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLS 240
+F+ +K+ RYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++
Sbjct: 4 LFRRMGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVT 63
Query: 241 NKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXX 420
N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 64 NRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMD 123
Query: 421 XXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 600
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS
Sbjct: 124 KIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHS 183
Query: 601 IKRFPXYDA 627
KRFP YD+
Sbjct: 184 TKRFPGYDS 192
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 257 bits (629), Expect = 3e-68
Identities = 116/171 (67%), Positives = 133/171 (77%)
Frame = +1
Query: 115 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 294
RYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 295 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 474
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 475 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDA 627
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFP YD+
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDS 185
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 257 bits (629), Expect = 3e-68
Identities = 116/171 (67%), Positives = 133/171 (77%)
Frame = +1
Query: 115 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 294
RYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 295 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 474
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 475 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDA 627
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFP YD+
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDS 185
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 257 bits (629), Expect = 3e-68
Identities = 116/171 (67%), Positives = 133/171 (77%)
Frame = +1
Query: 115 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 294
RYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 295 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 474
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 475 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDA 627
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFP YD+
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDS 185
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 257 bits (629), Expect = 3e-68
Identities = 116/171 (67%), Positives = 133/171 (77%)
Frame = +1
Query: 115 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 294
RYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 295 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 474
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 475 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDA 627
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFP YD+
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDS 185
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 257 bits (629), Expect = 3e-68
Identities = 116/171 (67%), Positives = 133/171 (77%)
Frame = +1
Query: 115 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 294
RYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 295 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 474
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 475 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDA 627
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFP YD+
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDS 185
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 255 bits (624), Expect = 1e-67
Identities = 115/171 (67%), Positives = 132/171 (77%)
Frame = +1
Query: 115 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 294
RYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 295 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 474
VCA Y+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 475 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDA 627
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFP YD+
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDS 185
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (407), Expect = 2e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +1
Query: 223 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 402
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 403 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 582
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 583 LNVPH 597
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 162 bits (394), Expect = 8e-40
Identities = 70/84 (83%), Positives = 81/84 (96%)
Frame = +1
Query: 115 RYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 294
RYQVKF+ RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 295 VCAAYSHELPRYGVKVGLTNYAAA 366
VCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAA 98
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 61.3 bits (142), Expect = 3e-09
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +1
Query: 529 TTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDA 627
TTTG +VFGA+KGAVDGGL++PHS KRFP YD+
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDS 33
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,660,808
Number of Sequences: 237096
Number of extensions: 1831682
Number of successful extensions: 3511
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3501
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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