Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_I23
         (595 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6BYB2 Cluster: Debaryomyces hansenii chromosome A of s...    36   0.54 
UniRef50_Q17666 Cluster: Putative uncharacterized protein; n=1; ...    33   3.8  
UniRef50_Q97BJ7 Cluster: Putative uncharacterized protein TVG044...    33   5.0  
UniRef50_Q11VU5 Cluster: B-glycosyltransferase-related protein, ...    33   6.7  
UniRef50_Q95R60 Cluster: SD05384p; n=3; Sophophora|Rep: SD05384p...    32   8.8  

>UniRef50_Q6BYB2 Cluster: Debaryomyces hansenii chromosome A of
           strain CBS767 of Debaryomyces hansenii; n=1;
           Debaryomyces hansenii|Rep: Debaryomyces hansenii
           chromosome A of strain CBS767 of Debaryomyces hansenii -
           Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 797

 Score = 36.3 bits (80), Expect = 0.54
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = -2

Query: 558 CTLMCNXLLLSVY--SCLVFLFRNKIRFSCMKAYTKSYLII*CW-PIILLGTFLL*SFID 388
           C+L  N  L S++  S + + F  K+ F CM  +T +YLI  CW P  + G F   + ID
Sbjct: 340 CSLEDNRYLYSIWLHSFIHYSFTQKLMFGCMINFTTNYLISNCWMPQYISGGFT--ALID 397

Query: 387 *NKI 376
             K+
Sbjct: 398 RTKV 401


>UniRef50_Q17666 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 147

 Score = 33.5 bits (73), Expect = 3.8
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 555 TLMCNXLLLSVYSCL-VFLFRNKIRFSCMKAYTKSYLII*CWPIILLGTF 409
           T M    L+ +YSC+ V+L  N    + +  YT  +++I CW   L G +
Sbjct: 75  TFMIKCFLILIYSCIIVYLSDNPANRNTVAVYTLIFVLIHCWEQFLYGFY 124


>UniRef50_Q97BJ7 Cluster: Putative uncharacterized protein
           TVG0449104; n=2; Thermoplasma volcanium|Rep: Putative
           uncharacterized protein TVG0449104 - Thermoplasma
           volcanium
          Length = 1171

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +1

Query: 88  KHCNYNYIIKLIP*SFTKSHFTVVFYVKNGILLSVLFRS*SNSCFL 225
           K+  YN  I+ I  S T S+ T++FYV N I    +FR  SN  ++
Sbjct: 820 KNGYYNLTIQAISNSGTSSNSTILFYVNNSIPTRQVFRVYSNKTYV 865


>UniRef50_Q11VU5 Cluster: B-glycosyltransferase-related protein,
           glycosyltransferase family 2 protein; n=1; Cytophaga
           hutchinsonii ATCC 33406|Rep:
           B-glycosyltransferase-related protein,
           glycosyltransferase family 2 protein - Cytophaga
           hutchinsonii (strain ATCC 33406 / NCIMB 9469)
          Length = 349

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = +3

Query: 24  LNLCL*HSCSSFIYCEIIK---XF*TLQLQLYY*ANTVIIYEKSFHCCVLREKWNITFSL 194
           +NLC+   CS+  Y  II     F   ++ L+Y   T I    S   C+ R KWN+  S+
Sbjct: 263 INLCIYPVCSTIFYAGIIYSGISFNFAEIMLFYILRTCIFI--SIFVCMGR-KWNVPVSI 319

Query: 195 ISLLIKQLFSCKYCL 239
             L I ++    Y L
Sbjct: 320 FFLPIAEIVYLIYLL 334


>UniRef50_Q95R60 Cluster: SD05384p; n=3; Sophophora|Rep: SD05384p -
           Drosophila melanogaster (Fruit fly)
          Length = 1189

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 534 EVDCTSKCKSRNHGQVLTSA 593
           E DCT+KC+ R HG  +T+A
Sbjct: 8   EYDCTAKCRLRQHGNAITAA 27


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,718,592
Number of Sequences: 1657284
Number of extensions: 7209167
Number of successful extensions: 13985
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13978
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)