Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_I22
         (510 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p pro...   115   3e-26
AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-P...   115   3e-26
AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-P...   115   3e-26

>AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p
           protein.
          Length = 147

 Score =  115 bits (277), Expect = 3e-26
 Identities = 63/130 (48%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
 Frame = +3

Query: 51  QLHLXGQST-HVLDVNGQESIGQXKERIRTLAAVGDEXLTLSLCGAPXXXXXXXXXXXXX 227
           QL + G  T   L+V+   +I   K ++  +     E  +L   G               
Sbjct: 17  QLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSSF 76

Query: 228 XXXXTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVVQTF 407
                +P+LGGKVHGSLARAGKVKGQTPKVE        TGRAKRRIQYNRRFVN VQ F
Sbjct: 77  ELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGF 136

Query: 408 GRRRGPNSNS 437
           GRRRGPN+NS
Sbjct: 137 GRRRGPNANS 146


>AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-PB,
           isoform B protein.
          Length = 132

 Score =  115 bits (277), Expect = 3e-26
 Identities = 63/130 (48%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
 Frame = +3

Query: 51  QLHLXGQST-HVLDVNGQESIGQXKERIRTLAAVGDEXLTLSLCGAPXXXXXXXXXXXXX 227
           QL + G  T   L+V+   +I   K ++  +     E  +L   G               
Sbjct: 2   QLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSSF 61

Query: 228 XXXXTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVVQTF 407
                +P+LGGKVHGSLARAGKVKGQTPKVE        TGRAKRRIQYNRRFVN VQ F
Sbjct: 62  ELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGF 121

Query: 408 GRRRGPNSNS 437
           GRRRGPN+NS
Sbjct: 122 GRRRGPNANS 131


>AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-PA,
           isoform A protein.
          Length = 132

 Score =  115 bits (277), Expect = 3e-26
 Identities = 63/130 (48%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
 Frame = +3

Query: 51  QLHLXGQST-HVLDVNGQESIGQXKERIRTLAAVGDEXLTLSLCGAPXXXXXXXXXXXXX 227
           QL + G  T   L+V+   +I   K ++  +     E  +L   G               
Sbjct: 2   QLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSSF 61

Query: 228 XXXXTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVVQTF 407
                +P+LGGKVHGSLARAGKVKGQTPKVE        TGRAKRRIQYNRRFVN VQ F
Sbjct: 62  ELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGF 121

Query: 408 GRRRGPNSNS 437
           GRRRGPN+NS
Sbjct: 122 GRRRGPNANS 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,159,821
Number of Sequences: 53049
Number of extensions: 287511
Number of successful extensions: 546
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)