Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_I21
(566 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g51540.1 68414.m05801 kelch repeat-containing protein contain... 30 0.94
At1g24480.1 68414.m03083 hypothetical protein 29 2.9
At5g42170.1 68418.m05133 family II extracellular lipase, putativ... 28 3.8
At4g19090.1 68417.m02814 hypothetical protein contains Pfam doma... 28 3.8
At2g01050.1 68415.m00010 hypothetical protein 28 5.0
At5g10690.1 68418.m01237 pentatricopeptide (PPR) repeat-containi... 27 6.6
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 27 8.7
At2g37730.1 68415.m04627 fringe-related protein similarity to pr... 27 8.7
At2g36390.1 68415.m04466 1,4-alpha-glucan branching enzyme / sta... 27 8.7
At1g54940.1 68414.m06274 glycogenin glucosyltransferase (glycoge... 27 8.7
At1g09620.1 68414.m01079 tRNA synthetase class I (I, L, M and V)... 27 8.7
>At1g51540.1 68414.m05801 kelch repeat-containing protein contains
Pfam profile PF01344: Kelch motif
Length = 1036
Score = 30.3 bits (65), Expect = 0.94
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +1
Query: 133 HTEVQWKVMKNSI-----TDMKHISTEKTLMVGKSAKE*MTSVVW 252
H E WKV+ NSI T KH T+K ++VG+ + + ++ W
Sbjct: 938 HIEFAWKVVNNSIVIVGGTTEKHPETKKMVLVGEIFQFNLNTLKW 982
>At1g24480.1 68414.m03083 hypothetical protein
Length = 239
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 222 RKGMNDLCGMDLVP-DPKIIKAALH 293
R G+ND GMDLVP P ++K H
Sbjct: 113 RVGVNDSVGMDLVPYPPLVVKGDFH 137
>At5g42170.1 68418.m05133 family II extracellular lipase, putative
similar to family II lipase EXL3 [Arabidopsis thaliana]
GI:15054386; contains InterPro Entry IPR001087 Lipolytic
enzyme, G-D-S-L family
Length = 319
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 348 KDKCGNKVNEIYPYIIQEIKPTLTELGIDTPE 443
K +C K+NE+ +I PTL LG + P+
Sbjct: 202 KRRCSEKLNEVARNFNAKISPTLEALGKELPD 233
>At4g19090.1 68417.m02814 hypothetical protein contains Pfam domain,
PF04578: Protein of unknown function, DUF594
Length = 751
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -1
Query: 455 VAKLLRCVNTQFGESRLDLLNDVWVDFI 372
+AK L+ V FGE + +L+ VW++F+
Sbjct: 687 LAKELQRVEKNFGEDKWKILSKVWLEFL 714
>At2g01050.1 68415.m00010 hypothetical protein
Length = 515
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 235 MTSVVWISFPTQRLSKLPFMHADESMIMPLQSGL*KPAKTNVET 366
+T+ VW+ RLS +P+ + ++M + GL +P K ++ T
Sbjct: 162 VTTPVWV-----RLSNIPYNYYHRCLLMEIARGLGRPLKVDMNT 200
>At5g10690.1 68418.m01237 pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein contains CBS and
PPR domain repeats
Length = 580
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +3
Query: 231 MNDLCGMDLVPDPKIIKAALHACRRVNDYALAVRFIEACKDKCGNKVNEIYPYIIQEIKP 410
++++ + L PD +HAC + D A++F K+ K E Y +Q
Sbjct: 213 LDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKE----KAEEYYDDFLQPDVV 268
Query: 411 TLTEL 425
T T L
Sbjct: 269 TYTTL 273
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 115 PYLYGDHTEVQWKVMKNSITDMKHI--STEKTLMVGKSAKE*MTSVVWISFPT 267
PY Y +VQWKV + D + + +E ++G AK ++ + S+P+
Sbjct: 187 PYPYSRPIKVQWKVFEKLFVDFRDLLDHSEYCDLIG-IAKNKFQTIPYFSYPS 238
>At2g37730.1 68415.m04627 fringe-related protein similarity to
predicted proteins + similar to hypothetical protein
GB:AAC23643 [Arabidopsis thaliana] + weak similarity to
Fringe [Schistocerca gregaria](GI:6573138);Fringe
encodes an extracellular protein that regulates Notch
signalling.
Length = 532
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +3
Query: 315 YALAVRFIEACKDKCGNKVNEIYPYIIQEIKPTLTELGIDTPEELGYDKPEL 470
Y LAV ++ D C ++ +Y Q+I+ L+E+G+ +ELG+ + ++
Sbjct: 249 YPLAVELVKLL-DGCIDRYASLYGSD-QKIEACLSEIGVPLTKELGFHQVDI 298
>At2g36390.1 68415.m04466 1,4-alpha-glucan branching enzyme / starch
branching enzyme class II (SBE2-1) nearly identical to
starch branching enzyme class II [Arabidopsis thaliana]
GI:619939
Length = 858
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 164 FFITFHWTSV*SPYRYGADLHGR 96
F FHWT+ S YR G + G+
Sbjct: 762 FVFNFHWTNSYSDYRIGCSVPGK 784
>At1g54940.1 68414.m06274 glycogenin glucosyltransferase
(glycogenin)-related contains similarity to glycogenin-1
from Mus musculus [SP|Q9R062], Rattus norvegicus
[SP|O08730], Homo sapiens [SP|P46976]
Length = 557
Score = 27.1 bits (57), Expect = 8.7
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = +3
Query: 144 PVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVNDYAL 323
P+ E D + R DGW KG+ D+ + + + A+ + R + A+
Sbjct: 130 PLPQPEGSDANVDVIVARVPCDGWSANKGLRDVFRLQV--NLAAANLAVQSGLRTVNQAV 187
Query: 324 AVRFIEACKDKCGNKVNEIYP 386
V FI +C ++EI+P
Sbjct: 188 YVVFIGSC-----GPMHEIFP 203
>At1g09620.1 68414.m01079 tRNA synthetase class I (I, L, M and V)
family protein similar to cytosolic leucyl-tRNA
synthetase [Candida albicans] GI:9858190; contains Pfam
profile PF00133: tRNA synthetases class I (I, L, M and
V)
Length = 1084
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 369 VNEIYPYIIQEIKPTLTELGIDTPEELGYDKPE 467
+ E + +QEIKP + I+T E + Y +PE
Sbjct: 482 IGEFFGRKVQEIKPIIKTKLIETGEAIIYSEPE 514
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,714,944
Number of Sequences: 28952
Number of extensions: 242587
Number of successful extensions: 656
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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