Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_I19
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB8E5.02c |rpn502|rpn5, rpn5-b|19S proteasome regulatory subu... 120 2e-28
SPAC1420.03 |rpn501|rpn5-a, rpn5|19S proteasome regulatory subun... 120 2e-28
SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr 2... 28 1.3
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 27 3.1
SPBP8B7.10c |||U3 snoRNP-associated protein Utp16 |Schizosacchar... 27 3.1
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 26 4.1
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 26 5.4
SPAC1952.08c |||pyridoxamine 5'-phosphate oxidase |Schizosacchar... 25 7.2
SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|... 25 9.5
>SPAPB8E5.02c |rpn502|rpn5, rpn5-b|19S proteasome regulatory subunit
Rpn502|Schizosaccharomyces pombe|chr 1|||Manual
Length = 443
Score = 120 bits (288), Expect = 2e-28
Identities = 65/147 (44%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Frame = +3
Query: 213 KMEVDYSATCDEKLPLWKSWAAQGKIQ--EAIDQLLALEKQTRTGADMVSTSRILVTVVQ 386
K EVDYS E L KS I +++LL EKQ R +D + +++L+ +
Sbjct: 4 KPEVDYSEKFAE---LQKSLNNLNTIDIDANLEKLLIFEKQVRQASDTSTNTKVLIYIAD 60
Query: 387 IYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYVDKTPDKETKIKLIETLRTIT 566
+ F A ++ LN+ +V L K+ QLKQ++ +VQ TY+ D +TKI LIETLRTIT
Sbjct: 61 LLFRAGDFQGLNEQLVSLFKKHGQLKQSMTSLVQHVMTYLPGIDDLKTKINLIETLRTIT 120
Query: 567 EGKIYVEVERARLTHILAKIREEEGNV 647
+GKIYVEVERARLT +L++I+EE+G++
Sbjct: 121 DGKIYVEVERARLTQLLSQIKEEQGDI 147
>SPAC1420.03 |rpn501|rpn5-a, rpn5|19S proteasome regulatory subunit
Rpn501|Schizosaccharomyces pombe|chr 1|||Manual
Length = 443
Score = 120 bits (288), Expect = 2e-28
Identities = 65/147 (44%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Frame = +3
Query: 213 KMEVDYSATCDEKLPLWKSWAAQGKIQ--EAIDQLLALEKQTRTGADMVSTSRILVTVVQ 386
K EVDYS E L KS I +++LL EKQ R +D + +++L+ +
Sbjct: 4 KPEVDYSEKFAE---LQKSLNNLNTIDIDANLEKLLIFEKQVRQASDTSTNTKVLIYIAD 60
Query: 387 IYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYVDKTPDKETKIKLIETLRTIT 566
+ F A ++ LN+ +V L K+ QLKQ++ +VQ TY+ D +TKI LIETLRTIT
Sbjct: 61 LLFRAGDFQGLNEQLVSLFKKHGQLKQSMTSLVQHVMTYLPGIDDLKTKINLIETLRTIT 120
Query: 567 EGKIYVEVERARLTHILAKIREEEGNV 647
+GKIYVEVERARLT +L++I+EE+G++
Sbjct: 121 DGKIYVEVERARLTQLLSQIKEEQGDI 147
>SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 27.9 bits (59), Expect = 1.3
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Frame = +3
Query: 210 IKMEVDYSATCDEKLPLWK----SWAAQGKIQEAIDQLLALEKQTRTGADMV-STSRILV 374
+ M + + +KLPLWK ++ +G + L + G D+ IL
Sbjct: 114 VSMAICRAGAAQKKLPLWKYIAENFGTKGPYVLPVPSFNVLNGGSHAGGDLAFQEFMILP 173
Query: 375 TVVQIYFEAKNWSALNDH-IVVLSKRR 452
T + EA W A H + ++K+R
Sbjct: 174 TGAPSFSEAMRWGAETYHTLKSIAKKR 200
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 189 LDASGKIIKMEVDYSATCDEKLPLWKSWAAQGKI-QEAIDQL 311
LDA K I E +S E+L ++ W +QG I ++ DQL
Sbjct: 450 LDAESKGIAYEYKHSTFFSEQLTAFEVWLSQGLISRKPPDQL 491
>SPBP8B7.10c |||U3 snoRNP-associated protein Utp16
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 346
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 425 SYSCFVQKKIPIKTSCC*NGSGMLHLCRQNT**RNKDKTN*NIENHNRRKDLCRS*KSET 604
S +C ++ K+ IKT CC S + +L + N N+ DL ++ +
Sbjct: 91 SKTCLLRYKLLIKTFCCITYSKIENLSNTRMARLTAPSKGPSFSNLNKPNDLLKAEIEDN 150
Query: 605 D-SYFSQN 625
+ S++SQN
Sbjct: 151 EASHYSQN 158
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Frame = +3
Query: 447 RRSQLKQAVVKMVQECYTYVDKTPDKETKI-----KLIETLRTITEGK-IYVEVE--RAR 602
+RS K+ V+ C++ +D P K ++ L +T + ++E K I+ E+E R
Sbjct: 678 QRSLDKEEEKLFVEHCHSMIDVIPSKSAEVYSHLETLTKTFKNLSEAKPIFDEIELLDKR 737
Query: 603 LTHILAKIREEEGNV 647
L+ ++ + +G++
Sbjct: 738 LSETKTELSDLQGDL 752
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 156 FKMTTNGDIGGLDASGKIIKMEVDYSATCDEKLPLWKSWAAQGKIQEAIDQLL 314
+KM + + + AS + E + A C KL WK QE++ +L
Sbjct: 1581 YKMGDSSKLVDILASSSVSSEERSFLARCFHKLGKWKKSLQDSVNQESVRDIL 1633
>SPAC1952.08c |||pyridoxamine 5'-phosphate oxidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 204 KIIKMEVDYSATCDEKLPLWKSWAAQG 284
+IIK++++ + CD++L + W A+G
Sbjct: 159 RIIKIKLESARICDQRLNNVQKWNARG 185
>SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 483
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 453 SQLKQAVVKMVQE---CYTYVDKTPDKETKIKLIETLR 557
S K+ + + +QE C TY+++TPD K+ E R
Sbjct: 94 SGTKKLIDEFIQEVLMCLTYLEETPDLSLDEKITEFSR 131
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,541,637
Number of Sequences: 5004
Number of extensions: 50367
Number of successful extensions: 130
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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