Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_I19
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019062-1|AAH19062.1|  456|Homo sapiens proteasome (prosome, ma...   200   3e-51
AK222679-1|BAD96399.1|  456|Homo sapiens proteasome 26S non-ATPa...   200   3e-51
AB003103-1|BAA19749.1|  456|Homo sapiens 26S proteasome subunit ...   200   3e-51
BC065826-1|AAH65826.1|  397|Homo sapiens proteasome (prosome, ma...   136   5e-32

>BC019062-1|AAH19062.1|  456|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 12 protein.
          Length = 456

 Score =  200 bits (489), Expect = 3e-51
 Identities = 97/157 (61%), Positives = 125/157 (79%)
 Frame = +3

Query: 177 DIGGLDASGKIIKMEVDYSATCDEKLPLWKSWAAQGKIQEAIDQLLALEKQTRTGADMVS 356
           D G   A G+I+KMEVDYSAT D++LP     A +G++QE I+ LL+LEKQTRT +DMVS
Sbjct: 3   DGGSERADGRIVKMEVDYSATVDQRLPECAKLAKEGRLQEVIETLLSLEKQTRTASDMVS 62

Query: 357 TSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYVDKTPDKETKI 536
           TSRILV VV++ +EAK W  LN++I++LSKRRSQLKQAV KMVQ+C TYV++  D   K+
Sbjct: 63  TSRILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQAVAKMVQQCCTYVEEITDLPIKL 122

Query: 537 KLIETLRTITEGKIYVEVERARLTHILAKIREEEGNV 647
           +LI+TLR +TEGKIYVE+ERARLT  LA I+E+ G+V
Sbjct: 123 RLIDTLRMVTEGKIYVEIERARLTKTLATIKEQNGDV 159


>AK222679-1|BAD96399.1|  456|Homo sapiens proteasome 26S non-ATPase
           subunit 12 isoform 1 variant protein.
          Length = 456

 Score =  200 bits (489), Expect = 3e-51
 Identities = 97/157 (61%), Positives = 125/157 (79%)
 Frame = +3

Query: 177 DIGGLDASGKIIKMEVDYSATCDEKLPLWKSWAAQGKIQEAIDQLLALEKQTRTGADMVS 356
           D G   A G+I+KMEVDYSAT D++LP     A +G++QE I+ LL+LEKQTRT +DMVS
Sbjct: 3   DGGSERADGRIVKMEVDYSATVDQRLPECAKLAKEGRLQEVIETLLSLEKQTRTASDMVS 62

Query: 357 TSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYVDKTPDKETKI 536
           TSRILV VV++ +EAK W  LN++I++LSKRRSQLKQAV KMVQ+C TYV++  D   K+
Sbjct: 63  TSRILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQAVAKMVQQCCTYVEEITDLPIKL 122

Query: 537 KLIETLRTITEGKIYVEVERARLTHILAKIREEEGNV 647
           +LI+TLR +TEGKIYVE+ERARLT  LA I+E+ G+V
Sbjct: 123 RLIDTLRMVTEGKIYVEIERARLTKTLATIKEQNGDV 159


>AB003103-1|BAA19749.1|  456|Homo sapiens 26S proteasome subunit p55
           protein.
          Length = 456

 Score =  200 bits (489), Expect = 3e-51
 Identities = 97/157 (61%), Positives = 125/157 (79%)
 Frame = +3

Query: 177 DIGGLDASGKIIKMEVDYSATCDEKLPLWKSWAAQGKIQEAIDQLLALEKQTRTGADMVS 356
           D G   A G+I+KMEVDYSAT D++LP     A +G++QE I+ LL+LEKQTRT +DMVS
Sbjct: 3   DGGSERADGRIVKMEVDYSATVDQRLPECAKLAKEGRLQEVIETLLSLEKQTRTASDMVS 62

Query: 357 TSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYVDKTPDKETKI 536
           TSRILV VV++ +EAK W  LN++I++LSKRRSQLKQAV KMVQ+C TYV++  D   K+
Sbjct: 63  TSRILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQAVAKMVQQCCTYVEEITDLPIKL 122

Query: 537 KLIETLRTITEGKIYVEVERARLTHILAKIREEEGNV 647
           +LI+TLR +TEGKIYVE+ERARLT  LA I+E+ G+V
Sbjct: 123 RLIDTLRMVTEGKIYVEIERARLTKTLATIKEQNGDV 159


>BC065826-1|AAH65826.1|  397|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 12 protein.
          Length = 397

 Score =  136 bits (330), Expect = 5e-32
 Identities = 65/100 (65%), Positives = 83/100 (83%)
 Frame = +3

Query: 348 MVSTSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYVDKTPDKE 527
           MVSTSRILV VV++ +EAK W  LN++I++LSKRRSQLKQAV KMVQ+C TYV++  D  
Sbjct: 1   MVSTSRILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQAVAKMVQQCCTYVEEITDLP 60

Query: 528 TKIKLIETLRTITEGKIYVEVERARLTHILAKIREEEGNV 647
            K++LI+TLR +TEGKIYVE+ERARLT  LA I+E+ G+V
Sbjct: 61  IKLRLIDTLRMVTEGKIYVEIERARLTKTLATIKEQNGDV 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,143,461
Number of Sequences: 237096
Number of extensions: 1656790
Number of successful extensions: 4098
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4098
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)