BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_I19
(650 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058339-1|AAL13568.1| 502|Drosophila melanogaster GH11341p pro... 207 1e-53
AF145315-1|AAF08383.1| 502|Drosophila melanogaster hypothetical... 207 1e-53
AE014297-357|AAF51952.1| 502|Drosophila melanogaster CG1100-PA ... 207 1e-53
AE014134-3626|ABI31345.1| 132|Drosophila melanogaster CG41485-P... 29 5.5
>AY058339-1|AAL13568.1| 502|Drosophila melanogaster GH11341p
protein.
Length = 502
Score = 207 bits (505), Expect = 1e-53
Identities = 99/151 (65%), Positives = 123/151 (81%), Gaps = 2/151 (1%)
Frame = +3
Query: 201 GKIIKMEVDYSATCDEKLPLWKSWAAQGK--IQEAIDQLLALEKQTRTGADMVSTSRILV 374
G+I KMEVDY C+EK+PL K A + EAI+ +L LEKQTR GADMVS SR+LV
Sbjct: 9 GRITKMEVDYEPACNEKIPLAKELAKKNPDAFHEAIEMMLQLEKQTRLGADMVSCSRVLV 68
Query: 375 TVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYVDKTPDKETKIKLIETL 554
+ QI F+A NW+ALN+++ +L +RRSQLKQAVVKM+QEC TYVDKTPDKETK+KLI+TL
Sbjct: 69 AICQICFDASNWNALNEYVSLLVRRRSQLKQAVVKMIQECVTYVDKTPDKETKLKLIDTL 128
Query: 555 RTITEGKIYVEVERARLTHILAKIREEEGNV 647
R++TEGKIYVE+ERARLT ILA I+E +G+V
Sbjct: 129 RSVTEGKIYVEIERARLTKILADIKEADGDV 159
>AF145315-1|AAF08383.1| 502|Drosophila melanogaster hypothetical
55kDa protein protein.
Length = 502
Score = 207 bits (505), Expect = 1e-53
Identities = 99/151 (65%), Positives = 123/151 (81%), Gaps = 2/151 (1%)
Frame = +3
Query: 201 GKIIKMEVDYSATCDEKLPLWKSWAAQGK--IQEAIDQLLALEKQTRTGADMVSTSRILV 374
G+I KMEVDY C+EK+PL K A + EAI+ +L LEKQTR GADMVS SR+LV
Sbjct: 9 GRITKMEVDYEPACNEKIPLAKELAKKNPDAFHEAIEMMLQLEKQTRLGADMVSCSRVLV 68
Query: 375 TVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYVDKTPDKETKIKLIETL 554
+ QI F+A NW+ALN+++ +L +RRSQLKQAVVKM+QEC TYVDKTPDKETK+KLI+TL
Sbjct: 69 AICQICFDASNWNALNEYVSLLVRRRSQLKQAVVKMIQECVTYVDKTPDKETKLKLIDTL 128
Query: 555 RTITEGKIYVEVERARLTHILAKIREEEGNV 647
R++TEGKIYVE+ERARLT ILA I+E +G+V
Sbjct: 129 RSVTEGKIYVEIERARLTKILADIKEADGDV 159
>AE014297-357|AAF51952.1| 502|Drosophila melanogaster CG1100-PA
protein.
Length = 502
Score = 207 bits (505), Expect = 1e-53
Identities = 99/151 (65%), Positives = 123/151 (81%), Gaps = 2/151 (1%)
Frame = +3
Query: 201 GKIIKMEVDYSATCDEKLPLWKSWAAQGK--IQEAIDQLLALEKQTRTGADMVSTSRILV 374
G+I KMEVDY C+EK+PL K A + EAI+ +L LEKQTR GADMVS SR+LV
Sbjct: 9 GRITKMEVDYEPACNEKIPLAKELAKKNPDAFHEAIEMMLQLEKQTRLGADMVSCSRVLV 68
Query: 375 TVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYVDKTPDKETKIKLIETL 554
+ QI F+A NW+ALN+++ +L +RRSQLKQAVVKM+QEC TYVDKTPDKETK+KLI+TL
Sbjct: 69 AICQICFDASNWNALNEYVSLLVRRRSQLKQAVVKMIQECVTYVDKTPDKETKLKLIDTL 128
Query: 555 RTITEGKIYVEVERARLTHILAKIREEEGNV 647
R++TEGKIYVE+ERARLT ILA I+E +G+V
Sbjct: 129 RSVTEGKIYVEIERARLTKILADIKEADGDV 159
>AE014134-3626|ABI31345.1| 132|Drosophila melanogaster CG41485-PA
protein.
Length = 132
Score = 29.1 bits (62), Expect = 5.5
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 114 VQNIVLV*TYKFQFFKMTTNGDIGGL 191
+++ VL+ ++F+FF+ NGD+ GL
Sbjct: 35 IRHTVLLAGHEFEFFRAVANGDVNGL 60
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,370,527
Number of Sequences: 53049
Number of extensions: 508975
Number of successful extensions: 1133
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -