Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_I14
         (845 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g13080.1 68414.m01516 cytochrome P450 family protein identica...    31   1.3  
At1g79680.1 68414.m09293 wall-associated kinase, putative simila...    29   5.1  
At2g01560.1 68415.m00080 hypothetical protein                          28   6.8  
At1g71260.1 68414.m08224 expressed protein                             28   6.8  
At1g69260.1 68414.m07939 expressed protein                             28   6.8  
At4g21170.1 68417.m03062 pentatricopeptide (PPR) repeat-containi...    28   9.0  

>At1g13080.1 68414.m01516 cytochrome P450 family protein identical
           to gb|D78605 cytochrome P450 monooxygenase from
           Arabidopsis thaliana and is a member of the PF|00067
           Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and
           gb|T43466 come from this gene
          Length = 502

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
 Frame = +2

Query: 236 LNSVTGAPRYC-HKIVMKSGTVVRTCLDVNPNDSQHTCRVVELASNTAIADSAKVKSCAV 412
           L+ + G P  C HK+ +K G +V   L   P        VV ++S+ A     K      
Sbjct: 44  LHHLAGLPHRCFHKLSIKYGPLVFLRLGSVP--------VVVISSSEAAEAVLKTNDLEC 95

Query: 413 CNKDNCNGAGSISFSLPLATFALIATYF 496
           C++    G+G +S+     TFA    Y+
Sbjct: 96  CSRPKTVGSGKLSYGFKDITFAPYGEYW 123


>At1g79680.1 68414.m09293 wall-associated kinase, putative similar
           to wall-associated kinase 2 GI:4826399 from [Arabidopsis
           thaliana]
          Length = 769

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 359 LASNTAIADSAKVKSCAVCNKDNCNGAGSISFSLP 463
           L  N    DS   K+ ++ N  +CNG G    SLP
Sbjct: 168 LYCNARYGDSEYCKNISIMNDTSCNGIGCCKASLP 202


>At2g01560.1 68415.m00080 hypothetical protein
          Length = 277

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -1

Query: 842 LFRLFGIXDKFMKH--FLFRKLKWNFRYCFKQYCEXYQ 735
           +F  FG+  KF +   +L  K   +F  CFK +CE  Q
Sbjct: 43  IFDTFGVSLKFTRFVWYLLEKANPDFFRCFKTHCENIQ 80


>At1g71260.1 68414.m08224 expressed protein
          Length = 238

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 572 VGLGVPNSVLSAPNLVLTEKNSKEFIVNLSSFSYICPHL 688
           + L V NS+L   +  +      EF V  ++FS+  PH+
Sbjct: 165 ISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHI 203


>At1g69260.1 68414.m07939 expressed protein
          Length = 345

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -2

Query: 466 QWEREGNRSSSVTVVLVAHSAGLDLRAVSDRGVGGELDNSAGVLGIVG-VDIQASTDNSS 290
           +W    N+S     +L  HSAGLD   VS   +GG    +AG    V  ++ +AS+D + 
Sbjct: 179 RWSATANKSG----LLRQHSAGLDSLQVSGESLGG--GRAAGSSSSVSELETKASSDEAR 232

Query: 289 AL 284
           +L
Sbjct: 233 SL 234


>At4g21170.1 68417.m03062 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 534

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = +2

Query: 212 RNILPVEVLNSVTGAPRYCHKIVMKSGTVVRTCLDVNPNDSQHTCRVVELASNTAIADSA 391
           R+ L   V   +    R C K  +      +T L   P+   H CRV+E+A+ + + + A
Sbjct: 64  RSTLTSPVFLQILRETRKCPKTTLDFFDFAKTHLRFEPDLKSH-CRVIEVAAESGLLERA 122

Query: 392 KV 397
           ++
Sbjct: 123 EM 124


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,982,796
Number of Sequences: 28952
Number of extensions: 337476
Number of successful extensions: 825
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1960634400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)