Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_I13
         (547 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...   155   1e-39
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   2.8  
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    23   6.6  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score =  155 bits (375), Expect = 1e-39
 Identities = 72/100 (72%), Positives = 84/100 (84%)
 Frame = +3

Query: 135 KLPVAALEGTYIDKXCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEK 314
           K P  A+ GTYIDK CPFTG++SIRGRILTGVV+K  +   + IRRDYL ++ KY+ FEK
Sbjct: 40  KTPKEAITGTYIDKKCPFTGHISIRGRILTGVVRKCIV--LLYIRRDYLQFIRKYDTFEK 97

Query: 315 RHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 434
           R+RNM +HLSPCFRDVE GDIVT+GECRPLSKTVRFNVLK
Sbjct: 98  RNRNMRLHLSPCFRDVEAGDIVTLGECRPLSKTVRFNVLK 137



 Score = 27.1 bits (57), Expect = 0.40
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 71  HRQGGMHRQAMRHHNHVGXGFKTPSRGA*G 160
           +R+    ++ +R H+ +G GFKTP     G
Sbjct: 19  NRKNVSRKKGLRMHHSIGLGFKTPKEAITG 48


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 224  GEDAAADRNVTSEGTLLVNVGT 159
            GED   D+   S+GTLL  +GT
Sbjct: 1268 GEDDTGDKKTDSDGTLL-EIGT 1288


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 53  RPPFSCHRQGGMHRQAMRHHN 115
           R PF  H Q   + Q M HH+
Sbjct: 23  RSPFHHHHQQQQNHQRMPHHH 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,771
Number of Sequences: 2352
Number of extensions: 9567
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)