Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_I12
(649 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 291 1e-77
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 239 3e-62
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 222 7e-57
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 204 2e-51
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 196 5e-49
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 194 2e-48
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 175 8e-43
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 168 9e-41
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 160 3e-38
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 157 2e-37
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 155 9e-37
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 149 6e-35
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 134 2e-30
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 130 2e-29
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 124 2e-27
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 122 6e-27
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 116 7e-25
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 115 1e-24
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 113 5e-24
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 109 6e-23
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 109 7e-23
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 107 2e-22
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 107 2e-22
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 107 3e-22
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 104 2e-21
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 101 1e-20
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 101 2e-20
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 101 2e-20
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 97 4e-19
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 93 5e-18
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 88 1e-16
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 87 5e-16
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 74 3e-12
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 73 5e-12
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 59 8e-08
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 54 3e-06
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 48 3e-04
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 46 8e-04
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 45 0.002
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 44 0.002
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 44 0.004
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 44 0.004
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 43 0.006
UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular... 42 0.013
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 41 0.030
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 40 0.039
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 39 0.091
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 38 0.16
UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex ... 38 0.16
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.28
UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4; Mycoplas... 36 0.64
UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex ... 36 1.1
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 35 1.5
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 35 1.5
UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15; Bacteri... 35 1.5
UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular... 34 2.6
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 2.6
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 34 2.6
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 34 3.4
UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protei... 33 4.5
UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 4.5
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 33 6.0
UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolyt... 33 7.9
UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1; Psychrom... 33 7.9
UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=... 33 7.9
UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16; Bacteri... 33 7.9
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 291 bits (714), Expect = 1e-77
Identities = 138/167 (82%), Positives = 153/167 (91%)
Frame = +1
Query: 109 VKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 288
VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG+KKELAAVRTVCSH+ENMI
Sbjct: 20 VKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKELAAVRTVCSHIENMI 79
Query: 289 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 468
KGVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS QK
Sbjct: 80 KGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQK 139
Query: 469 DELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 609
DELI+EGN +E VS SAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV
Sbjct: 140 DELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 239 bits (586), Expect = 3e-62
Identities = 113/170 (66%), Positives = 140/170 (82%), Gaps = 2/170 (1%)
Frame = +1
Query: 103 VHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKELAAVRTVCSHV 276
+ +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW+G++KELA VRT+CSHV
Sbjct: 18 ITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRTICSHV 77
Query: 277 ENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNS 456
+NMIKGVT GF+YKMR+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PGV S
Sbjct: 78 QNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVS 137
Query: 457 PKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 606
QKDELI+EGN +E VS+SAALIQQ+TTVKNKDIRKFLDG+YVSEK TV
Sbjct: 138 QAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 222 bits (542), Expect = 7e-57
Identities = 104/175 (59%), Positives = 136/175 (77%), Gaps = 1/175 (0%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKELAAVRTVCS 270
G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WFG+++ +AA+RT S
Sbjct: 15 GVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWFGTRRTMAAIRTAIS 74
Query: 271 HVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV 450
HV+N+I GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK +R+V M GVT++
Sbjct: 75 HVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTIL 134
Query: 451 NSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 615
S K KDEL+++GN +E VS SAALI Q VKNKDIRKFLDG+YVS+K T+ D
Sbjct: 135 RSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 204 bits (497), Expect = 2e-51
Identities = 89/170 (52%), Positives = 125/170 (73%)
Frame = +1
Query: 97 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 276
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 277 ENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNS 456
ENMI GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T +
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRN 153
Query: 457 PKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 606
K KDE+++ GNSLE +S S A IQ + +K KD+RKFLDG+YVSE+ +
Sbjct: 154 EKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 196 bits (477), Expect = 5e-49
Identities = 95/171 (55%), Positives = 125/171 (73%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS+K A +R+V S
Sbjct: 16 GVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQG-NTIKFIVWHGSRKHNACIRSVYSI 74
Query: 274 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVN 453
+ NMI GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+ R +K PGVTV
Sbjct: 75 INNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSI 134
Query: 454 SPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 606
S KDE+I+EGNSLE+VS SAA I+Q V+NKDIRKFLDG+YVSE+ +
Sbjct: 135 SSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 194 bits (473), Expect = 2e-48
Identities = 98/176 (55%), Positives = 125/176 (71%), Gaps = 2/176 (1%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G +K +AA+RTV S
Sbjct: 15 GVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGGRKHVAALRTVKSL 74
Query: 274 VENMIKGVTKGFQYKMRAVYAHFPI--NCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 447
V+NMI GVTKG++YKMR VYAHFPI N V +G IE+RNFLG+K IR V + GVT+
Sbjct: 75 VDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTI 134
Query: 448 VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 615
S KDE+++ GNS+EDVS +AA +QQ V+NKDIRKFLDG+YVS K + D
Sbjct: 135 EFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFITED 190
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 175 bits (426), Expect = 8e-43
Identities = 85/163 (52%), Positives = 106/163 (65%)
Frame = +1
Query: 109 VKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 288
+ R+VTVKG +G L R+F H +DI N + V WF K A RT+CSH+ENM
Sbjct: 19 INKRVVTVKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGKRNALPRTICSHIENMF 77
Query: 289 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 468
KGVT GF+YKMR YAHFPI + N IEIRNF+ + RR++ PGVT+ S K
Sbjct: 78 KGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVK 137
Query: 469 DELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
DELI+ G S+EDVS +AA I +S V NKD+RKFLDG YVS +
Sbjct: 138 DELILRGISIEDVSHTAARIHESLKVPNKDLRKFLDGCYVSSR 180
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 168 bits (409), Expect = 9e-41
Identities = 83/183 (45%), Positives = 119/183 (65%), Gaps = 9/183 (4%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKWFGSKKEL 246
G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W+G++++
Sbjct: 16 GVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMWYGNRRDS 75
Query: 247 AAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVK 426
A VRT+ SH++NMI GVTKG+QYKMR VYAHFP+ V + I+++NFLGEK R ++
Sbjct: 76 AVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIE 135
Query: 427 MAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 606
M GV V KDE+ +EGN +E VS SAA I + V+NKDIR+FLDG+YVSEK +
Sbjct: 136 MYDGVVV--KKLGKDEICLEGNDVEKVSQSAANIHAANLVRNKDIRQFLDGVYVSEKCLI 193
Query: 607 VLD 615
D
Sbjct: 194 END 196
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 160 bits (388), Expect = 3e-38
Identities = 78/157 (49%), Positives = 105/157 (66%), Gaps = 3/157 (1%)
Frame = +1
Query: 148 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 318
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 319 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 498
MRAVYAHFPIN + EIRNFLGEK +R + M GVT+ QKD++++EGN +
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDI 211
Query: 499 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 609
+ VS SAAL+ +T V+NKDIRKFLDG+Y + K TVV
Sbjct: 212 DLVSQSAALLHGATLVRNKDIRKFLDGIYCTGKDTVV 248
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 157 bits (382), Expect = 2e-37
Identities = 82/172 (47%), Positives = 113/172 (65%), Gaps = 10/172 (5%)
Frame = +1
Query: 112 KSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------LLKVEKWFGSKKELAAVRTV 264
KS++V VKGPRG L +NF+H A+DI++ VN + + V W +K+ V +V
Sbjct: 21 KSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKSRVSVRMWQSYRKQRCQVNSV 80
Query: 265 CSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 444
S + NMI+GVT G+++KM YAHFPI +EI+NFLGEK IR +K PGVT
Sbjct: 81 ASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKIIRTIKCLPGVT 140
Query: 445 VV-NSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
+ N ++K+ L ++GN L +VS + ALI Q+ VKNKDIR+FLDG+YVSEK
Sbjct: 141 ITRNEAEEKNVLTLQGNDLNNVSLTCALIHQACAVKNKDIRQFLDGIYVSEK 192
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 155 bits (376), Expect = 9e-37
Identities = 68/112 (60%), Positives = 88/112 (78%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG +KE+AA+RTVCSH
Sbjct: 15 GVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFGVRKEIAAIRTVCSH 74
Query: 274 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 429
++NMIKGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 75 IQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 149 bits (361), Expect = 6e-35
Identities = 72/166 (43%), Positives = 106/166 (63%), Gaps = 1/166 (0%)
Frame = +1
Query: 103 VHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVE 279
+ K+R ++ G G + R+F+ + IR + + + W KK+LA + T+ SH+
Sbjct: 18 IKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWMAGKKQLAKLNTIASHIT 77
Query: 280 NMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSP 459
NMI GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK IR++ M GV + +
Sbjct: 78 NMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNE 137
Query: 460 KQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
+KDE+ + G+ L VS +AA IQQS KNKD+RKFLDG+Y+ K
Sbjct: 138 AKKDEISVFGSDLNLVSLNAASIQQSCQAKNKDLRKFLDGIYIIMK 183
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 134 bits (323), Expect = 2e-30
Identities = 73/168 (43%), Positives = 108/168 (64%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A VRT +H
Sbjct: 16 GVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAIVRTFKAH 74
Query: 274 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVN 453
+ NMIKGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+ PGVTV
Sbjct: 75 INNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV-- 130
Query: 454 SPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
+ E+ +EG E V +AA I+Q+T + D R F DG+Y+ EK
Sbjct: 131 -KVKGSEIEVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 130 bits (315), Expect = 2e-29
Identities = 73/168 (43%), Positives = 106/168 (63%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A RT +H
Sbjct: 16 GVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAIARTFAAH 74
Query: 274 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVN 453
+ NMIKGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+ PGVTV
Sbjct: 75 IRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV-- 130
Query: 454 SPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
+ E+I+EG E V +AA I+Q+T + D R F DG+Y+ EK
Sbjct: 131 -KVRGQEIIVEGIDKEAVGQTAANIEQATRITKWDRRIFQDGIYIVEK 177
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 124 bits (298), Expect = 2e-27
Identities = 68/123 (55%), Positives = 85/123 (69%)
Frame = +1
Query: 238 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIR 417
KELA VRT+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N V
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVV-------------------- 69
Query: 418 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
+M GV S QKDELI+EGN E VS+SAALIQ++T V+N+DIRKF+DG+YVSEK
Sbjct: 70 --QMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEK 127
Query: 598 TTV 606
T+
Sbjct: 128 GTM 130
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 122 bits (295), Expect = 6e-27
Identities = 68/168 (40%), Positives = 99/168 (58%), Gaps = 2/168 (1%)
Frame = +1
Query: 100 TVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
T + ++ T +GP+G +++ +H L DI N +++ W G +K +A TV S
Sbjct: 37 TATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---IRIRLWNGKRKAMALAITVESL 93
Query: 274 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVN 453
+ N IK VT GF Y M+AVY HF IN E I+ ++NFLGEK ++R +M G V
Sbjct: 94 LRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-GAARVR 152
Query: 454 SPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
++KD ++IEG SL DVS SA I KN+D R FLDG++V+E+
Sbjct: 153 LDERKDTIVIEGPSLSDVSQSAGTITNECKAKNRDSRVFLDGIFVTER 200
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 116 bits (278), Expect = 7e-25
Identities = 68/168 (40%), Positives = 95/168 (56%), Gaps = 8/168 (4%)
Frame = +1
Query: 109 VKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVC 267
VKS +VT++ P+ L ++ HL +D N + WFG++K LA + T+
Sbjct: 21 VKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIVARCWFGNRKLLARIGTLF 80
Query: 268 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 447
V+NMI GVT G++YKM VY+HFPI +E + F+G K + V GV +
Sbjct: 81 GIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRI 140
Query: 448 -VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYV 588
N KDE+ IEG +LEDVS I Q T +K+KD+RKFLDG+YV
Sbjct: 141 WSNESVAKDEINIEGANLEDVSLVCGQIHQLTKIKDKDLRKFLDGIYV 188
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 115 bits (276), Expect = 1e-24
Identities = 55/100 (55%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Frame = +1
Query: 103 VHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKELAAVRTVCSHVE 279
V +KSR + V G G L+R F+H+ VD+++V R + VE WFG K A +RTVCSH+E
Sbjct: 80 VTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVEMWFGLTKNKACIRTVCSHIE 139
Query: 280 NMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 399
NMI GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 140 NMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 113 bits (271), Expect = 5e-24
Identities = 65/168 (38%), Positives = 100/168 (59%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA T+ +H
Sbjct: 12 GVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAMTGTLEAH 70
Query: 274 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVN 453
+NMI+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK R K+ GVTV
Sbjct: 71 AKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTVKI 128
Query: 454 SPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
DE+ I G E V ++AA I+ +T + +D R F DG+Y++E+
Sbjct: 129 G---NDEVTITGIDKEKVGNTAANIEHATRITKRDPRVFQDGIYITER 173
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 109 bits (262), Expect = 6e-23
Identities = 64/168 (38%), Positives = 101/168 (60%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V T SH
Sbjct: 14 GVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVGTFASH 72
Query: 274 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVN 453
++N+I GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK R K+ G T V
Sbjct: 73 LKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL-GETKVK 129
Query: 454 SPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
+E+++ G + EDV +AA I+Q T +K D R F DG+Y+ +K
Sbjct: 130 --VSGNEIVVSGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 175
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 109 bits (261), Expect = 7e-23
Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 1/161 (0%)
Frame = +1
Query: 118 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVENMIKG 294
R++ VKG G ++F+ + V IR+ + LK E K++LA + T S V N+ +G
Sbjct: 8 RMLHVKGKLGSAHKSFRKIPVGIRIDGSSVVLKAEGT--RKRDLAILNTARSIVRNLCEG 65
Query: 295 VTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDE 474
V G+ K++ VYAHFPI + +G I+ + NF GE+ R+ K+ G VV+ + ++
Sbjct: 66 VGVGYTIKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KGED 120
Query: 475 LIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
+I+ G+ L DVS +AA ++Q T VKNKD R FLDG+YV EK
Sbjct: 121 VIVTGHVLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 107 bits (258), Expect = 2e-22
Identities = 55/172 (31%), Positives = 108/172 (62%), Gaps = 1/172 (0%)
Frame = +1
Query: 103 VHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVE 279
V +++ ++ VKGP+G + ++F + A IR+ +N + +E F +++ A + ++ +H++
Sbjct: 21 VSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTFADRRKKALLYSIIAHIK 79
Query: 280 NMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSP 459
NMI G G++Y ++ + HFPI+ V G+ +++ N +GEK IRR K+ PGV V
Sbjct: 80 NMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEKNIRRAKILPGVKVT--- 134
Query: 460 KQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 615
+ +++++EG+ + +V+ +AA I+ ST + D R F DG+Y+ +K + L+
Sbjct: 135 VKGEDIVVEGSDIYNVAQTAANIESSTKIVGYDRRIFSDGIYIYKKEVIGLE 186
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 107 bits (257), Expect = 2e-22
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLA-VDIRMVNPRLLKVEKWFGSKKELAAVRTVCS 270
G+ VHV + V V+GP G ++++F H + IR V + VE + +KK+ A V T+ S
Sbjct: 15 GVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFHATKKDYALVGTIAS 73
Query: 271 HVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV 450
+ NMI GVTKG++YK++ VYAHFP++ + E + II I NFLGE+ R + PG V
Sbjct: 74 IINNMIIGVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAKV- 130
Query: 451 NSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNK 555
+KD++I+EG L+ V+ +AA I +T ++ K
Sbjct: 131 --KIEKDDVIVEGIDLDAVAQTAANIHLATHLRGK 163
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 107 bits (256), Expect = 3e-22
Identities = 60/154 (38%), Positives = 91/154 (59%)
Frame = +1
Query: 136 GPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQY 315
GP+G R K+ V I + + ++ +V KK A V T H+EN+I GV +GF+Y
Sbjct: 48 GPKGENTRYLKYRGVFIEVGDGKV-RVYTTSPKKKHKAMVGTFAGHIENLITGVKEGFEY 106
Query: 316 KMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNS 495
++ VYAHFPI V EGN +I I NF+GEK+ RR K+ V S + ++ + G
Sbjct: 107 HLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ---DIYVRGID 161
Query: 496 LEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
+E+ +AA ++Q+T +K KD R F DG+Y+ +K
Sbjct: 162 IEECGQTAANLEQATKIKRKDPRVFQDGIYIVKK 195
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 104 bits (250), Expect = 2e-21
Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Frame = +1
Query: 103 VHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKWFGSKKELAAVRTVCSHV 276
+ +K + + KG G L + F + V+I + + L V ++ +K A VRT+ S +
Sbjct: 18 IRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCYYNNKSSSAIVRTITSII 77
Query: 277 ENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNS 456
NMI GV+KGF Y ++ VY+HFPI+ + + +EI N G K I + V V +
Sbjct: 78 YNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTN 137
Query: 457 PKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
K E+I+ +E + ++LIQ ++ NKD R F+DG+Y++ K
Sbjct: 138 NLNKKEIILLSKDIETLGILSSLIQNKCSINNKDCRVFIDGIYLASK 184
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 101 bits (243), Expect = 1e-20
Identities = 59/168 (35%), Positives = 98/168 (58%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G+TV ++ +GP G +NF+++ V I + + ++ ++ K++ A + T S
Sbjct: 18 GVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGKV-NLKTIGERKRDYAILHTARSI 76
Query: 274 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVN 453
+ N+ +G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ R + V+
Sbjct: 77 IRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI- 133
Query: 454 SPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
PK +D +++ G D++ +AA I+ +T VKNKD R FLDG+YV EK
Sbjct: 134 -PKGED-VLLTGEVWTDITQTAANIELTTKVKNKDHRVFLDGIYVYEK 179
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 101 bits (241), Expect = 2e-20
Identities = 57/170 (33%), Positives = 97/170 (57%), Gaps = 5/170 (2%)
Frame = +1
Query: 103 VHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVEN 282
V ++ ++ V GP+G ++R F H + + VN + +E +F +++E + T SH++N
Sbjct: 18 VSYENNILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFATRREKRLINTWRSHIKN 76
Query: 283 MIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK--YIRRVKMAPGVTV-VN 453
M++GV F Y+++ Y HFP+ V EGN +I + NFLGEK I+ + V V +
Sbjct: 77 MLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKAPIIKELPYLDKVKVKIE 134
Query: 454 SPKQKDELIIEGNSLEDVSSSAALIQQSTTV--KNKDIRKFLDGLYVSEK 597
K + E+++E E A++I+QST K KD R+F DG+++ K
Sbjct: 135 QNKDETEIVVESPDKEKAGIVASMIEQSTRFLHKRKDRRRFTDGIWLYYK 184
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 101 bits (241), Expect = 2e-20
Identities = 58/158 (36%), Positives = 92/158 (58%)
Frame = +1
Query: 124 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 303
+TV+G G + R + +D+ V+ + +E + K ++ + T SH+ENM GVT+
Sbjct: 21 ITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTE 79
Query: 304 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 483
G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR + G T V +EL +
Sbjct: 80 GWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI-HGDTDVEI--DGEELTV 134
Query: 484 EGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
G +E V +AA I+Q T + +KD+R F DG+Y++ K
Sbjct: 135 SGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 96.7 bits (230), Expect = 4e-19
Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G+T V VTV L R F+H +++R + L +V KKE A T +H
Sbjct: 16 GVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGEL-EVFVNLPRKKEKALAGTWAAH 74
Query: 274 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP--GVTV 447
+ NM +GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P V
Sbjct: 75 LTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALPWSPAEV 131
Query: 448 VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
+ K ++ + G E V +AA I++S +KN+D R F DG+Y+ K
Sbjct: 132 EVKVQNKTDVTVSGADREKVGQTAANIERSCRIKNRDRRVFQDGIYIVSK 181
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 93.1 bits (221), Expect = 5e-18
Identities = 52/159 (32%), Positives = 93/159 (58%), Gaps = 1/159 (0%)
Frame = +1
Query: 124 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 303
VTVKGP+G + + F + V + + + ++ + ++++ A + + +++ENM KGVT+
Sbjct: 43 VTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAATRSNRRQKAILGMIKAYIENMQKGVTE 101
Query: 304 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA-PGVTVVNSPKQKDELI 480
G +YK++ VY+HFP + + I NF+GE R ++ P T V Q ++I
Sbjct: 102 GHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTEV--IVQGQDII 159
Query: 481 IEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 597
+ G E V +AA ++Q+T +K++D R F DG+Y+ EK
Sbjct: 160 VRGIDKEAVGQTAANLEQATYIKDRDPRVFQDGIYIVEK 198
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 88.2 bits (209), Expect = 1e-16
Identities = 49/136 (36%), Positives = 81/136 (59%)
Frame = +1
Query: 190 MVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEG 369
+V +K+ K + +E V T S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G
Sbjct: 46 LVEDNKIKIVKSKNNSRERGIVGTWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKG 104
Query: 370 NSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVK 549
+++ I NF GE+ R ++ G T V+ + D L + G S +DV +AA I+++T +K
Sbjct: 105 KTVV-IENFFGERSPRTAEIV-GETQVS--VKGDRLFLNGPSKKDVGETAANIERATIIK 160
Query: 550 NKDIRKFLDGLYVSEK 597
D R F DG+Y+ K
Sbjct: 161 GFDPRVFQDGIYLISK 176
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 86.6 bits (205), Expect = 5e-16
Identities = 50/140 (35%), Positives = 85/140 (60%)
Frame = +1
Query: 121 LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVT 300
+V VKGP G + + FK+ V + + + +++ +E + K+E A + T ++NM GVT
Sbjct: 29 IVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-MEVFKARKREYAILGTYKGILKNMFLGVT 87
Query: 301 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 480
+G++YK++ +Y HFP+ V +GN ++ I NFLG K + + GV V K K++++
Sbjct: 88 RGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKEDIV 143
Query: 481 IEGNSLEDVSSSAALIQQST 540
IEG E VS+ AA +Q +T
Sbjct: 144 IEGIDRELVSTFAAAVQAAT 163
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 74.1 bits (174), Expect = 3e-12
Identities = 48/153 (31%), Positives = 79/153 (51%)
Frame = +1
Query: 130 VKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGF 309
+KG G R F+ V + +K+ +K V T S + +I+GVTKGF
Sbjct: 27 IKGKLGEASRIFRDNYVKA-YIEGSSVKIATSKNNKYTKGIVGTWYSETKLLIEGVTKGF 85
Query: 310 QYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEG 489
+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+ G V + D + I G
Sbjct: 86 EYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV---SVKGDRITING 140
Query: 490 NSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYV 588
+ +AA I+++T +++ D R F DG+++
Sbjct: 141 IDKRKIGETAANIERATYIRHFDARVFQDGIFL 173
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +1
Query: 109 VKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKWFGSKKELAAVRTVCSHVEN 282
+K R V VKGP+G L R+F H+ V++ ++ +L K V+KW+G++KELA V T+CS V+N
Sbjct: 20 LKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKWWGNRKELATVHTICSPVQN 79
Query: 283 MIKGVTKG 306
IK VT G
Sbjct: 80 TIKWVTLG 87
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 64.1 bits (149), Expect = 3e-09
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = -2
Query: 609 HNSCFLRYIKTIQELSDILILDCSRLLNESSRARDIFQRVAFND*FILLFWRVNDSHTRC 430
+N R I TIQE +DIL+ D + LLN SS R+ FQ V N+ FILL R T
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFM 80
Query: 429 HLYPSDVFLTQEVTYLNN*ITL--SGDTVNGEVSIHSTHLVLEAFSYSFNHV 280
S+ F TQE++ N +T+ + VN E+ I+ +HLV FS + + V
Sbjct: 81 DFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVFVTFSDTSDQV 132
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +1
Query: 268 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 447
+H+++ + GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++ V
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAF 80
Query: 448 VNSPKQKDELI 480
S QK+EL+
Sbjct: 81 YASQAQKNELM 91
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +1
Query: 115 SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKELAAVRTVCSHVENMI 288
+ +V VK RG L+R+F H+ +++R++ R L+V+KW + K LA T+ SHV+NMI
Sbjct: 16 AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKWLKTMK-LATAHTIYSHVQNMI 74
Query: 289 KGV 297
K V
Sbjct: 75 KRV 77
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 47.6 bits (108), Expect = 3e-04
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Frame = +1
Query: 118 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGV 297
+L+ + GPRG+L RNFKH ++DI+ V+K KE+ + + +++++
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQ--------VQKEI---KEIKQIGLIKIEYQDVVQYS 101
Query: 298 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSP-KQKDE 474
+ FQ K A +I+N IR + GV + ++K+
Sbjct: 102 KQRFQVKSIAA-----------------QIKNM-----IRGI--TSGVVITRKEAEEKNV 137
Query: 475 LIIEGNSLEDVSSSAALIQQSTTVKNKDIR 564
LI+ N L +VS + ALI Q+ VKNKDIR
Sbjct: 138 LILSANDLNNVSLTCALIHQACAVKNKDIR 167
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 46.0 bits (104), Expect = 8e-04
Identities = 38/136 (27%), Positives = 66/136 (48%)
Frame = +1
Query: 124 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 303
V VKGP+G L R F H ++I+ V +L V + K+ A T S + NM++GV+K
Sbjct: 25 VAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKEHRALHGTTRSLLGNMVEGVSK 82
Query: 304 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 483
GF+ + V + + GN ++ L Y V++ P + + ++++
Sbjct: 83 GFERGLELVGVGYR---ASKSGNKLV-----LNVGYSHPVEIVPEEGIEIEVPSQTKVVV 134
Query: 484 EGNSLEDVSSSAALIQ 531
+G E V + AA I+
Sbjct: 135 KGTDKERVGAIAANIR 150
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 44.8 bits (101), Expect = 0.002
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Frame = +1
Query: 94 GLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCS 270
G+ V V +VTVKG +G L++ F + V+I + + ++ K K+E A T +
Sbjct: 14 GVEVKVSPDNVVTVKGAKGTLEKKFPPI-VNIEVRDGEVVVTRKG-DDKEERAMHGTTRA 71
Query: 271 HVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV 450
+ NM+KGVT+GF+ + V + +G + I N +G + ++ PG+ ++
Sbjct: 72 IIANMVKGVTEGFEKALEIVGVGYR---AAKQGKKL--ILN-VGYSHPVEIEEEPGIEII 125
Query: 451 NSPKQKDELIIEGNSLEDVSSSAALIQQ 534
+ + +I+ G E V AA I++
Sbjct: 126 --VEGNNRIIVRGADKERVGQVAANIRR 151
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 44.4 bits (100), Expect = 0.002
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWFGSKKELAAVR 258
G+ + V + + +KG G L N ++L VD R N ++K V K +K L A+R
Sbjct: 16 GVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRSSDEKRLKALR 74
Query: 259 -TVCSHVENMIKGVTKGFQYKM 321
T SHV NMIKGVT+G++ ++
Sbjct: 75 GTFTSHVRNMIKGVTEGYKKEL 96
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 43.6 bits (98), Expect = 0.004
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKKELAAVRTVCS 270
G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++ A T +
Sbjct: 14 GVEVKLVGQLLSVKGPKGTLELII-HSSVEVEIVEEAGELRFAARNGDQQTRAMAGTTRA 72
Query: 271 HVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV 450
V NM++GV++GF+ K++ V + T N LG + ++ G+T
Sbjct: 73 LVNNMVQGVSQGFERKLQLVGVGYKAQAKGTVLNLA------LGFSHPVDYELPNGIT-A 125
Query: 451 NSPKQKDELIIEGNSLEDVSSSAALIQ 531
+P Q D ++I G + V AA I+
Sbjct: 126 ETPSQTD-ILIRGIDKQLVGQVAAEIR 151
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 43.6 bits (98), Expect = 0.004
Identities = 43/147 (29%), Positives = 70/147 (47%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G+ V+V + +TVKG G L R H AV + + L + S A T +
Sbjct: 15 GVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAELQTICA-NDSPGSNALAGTARAV 72
Query: 274 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVN 453
+ NM++GV GFQ K+ V + EG ++ +G + ++M G+T V
Sbjct: 73 LANMVQGVHTGFQRKLVMVGVGYR---AKAEGK---KLNLTVGLSHPVNIEMPEGIT-VE 125
Query: 454 SPKQKDELIIEGNSLEDVSSSAALIQQ 534
+P Q E+I++G + VS AA I++
Sbjct: 126 TPSQ-TEIIVKGADKQRVSQVAANIRE 151
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 43.2 bits (97), Expect = 0.006
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G+ + + + VTVKGP+G L R H + I + +L VE+ K+ A T S
Sbjct: 14 GVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEHRALHGTTRSL 71
Query: 274 VENMIKGVTKGFQYKMRAV 330
+ NM+ GV+KGF+ + +
Sbjct: 72 INNMVIGVSKGFEKSLEII 90
>UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular
organisms|Rep: 50S ribosomal protein L6 - Borrelia
garinii
Length = 180
Score = 41.9 bits (94), Expect = 0.013
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +1
Query: 103 VHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVEN 282
+ VK LV V+G RG L ++ K ++++++ N ++ V + F KK A S + N
Sbjct: 17 IDVKGNLVIVEGTRGKLVQDIKD-SINVKVENGSVI-VNRAFNDKKTKAYHGLYRSLIFN 74
Query: 283 MIKGVTKGF 309
M+KGVT+GF
Sbjct: 75 MVKGVTEGF 83
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 40.7 bits (91), Expect = 0.030
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Frame = +1
Query: 103 VHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKKELAAVRTVCSHVE 279
V + ++ +KGP G L + + DI ++ N + V++ KK A +
Sbjct: 25 VKKQDNIIYIKGPLGKLNQE---IIGDINIIINHNNIIVKRKHNDKKNRALHGLYRMLIY 81
Query: 280 NMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSP 459
NMIKGV+ GF+ K+ + F N + N I+ + +G + +K+ +T+
Sbjct: 82 NMIKGVSNGFKKKLELIGVGFRAN-INNNNNQILNLN--IGYSHNIMIKLPQSITLEVKM 138
Query: 460 KQKDELIIEGNSLEDVSSSAALIQ 531
+ ++I++ + + AA I+
Sbjct: 139 DKNPQIILKSYDKQLLGIVAAKIR 162
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 40.3 bits (90), Expect = 0.039
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIR----MVNPRLLKVEKWFGSKKELAAVR 258
G+TV +K +V VKGP+G L + F ++ +++ V P ++ + +K
Sbjct: 14 GVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNEEQIIRKSDWRKVKMFQG 73
Query: 259 TVCSHVENMIKGVTKGFQYKMRAV 330
T S + NM+ GVT+G++ ++ V
Sbjct: 74 TYWSLIRNMVVGVTEGYKKELEIV 97
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 39.1 bits (87), Expect = 0.091
Identities = 32/144 (22%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Frame = +1
Query: 103 VHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC-SHVE 279
+ + + + VKGP+G L R+ L + ++ N ++L V + + + +C + V
Sbjct: 17 IQIDGQHIAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRPARQLHGLCRTLVA 73
Query: 280 NMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSP 459
NM+ GV+KGF+ ++ V + +G+ + + N +G + + PG+ + +
Sbjct: 74 NMVDGVSKGFERRLELVGVGYR---AAIQGSKL--VLN-VGYSHPVEIPFPPGIQI--AV 125
Query: 460 KQKDELIIEGNSLEDVSSSAALIQ 531
+ + +++ G E V ++AA I+
Sbjct: 126 EGNNIIVVSGTDKELVGNTAARIR 149
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 38.3 bits (85), Expect = 0.16
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVE---KWFGSKKELAAVRTV 264
G+TV +K +VTVKGP+G L + + + A+++ + + + E + + K+ A +
Sbjct: 14 GVTVTLKDDVVTVKGPKGELSQ-YVNPAINVAIEDGHVTLTENEKEMIDNPKQKHAFHGL 72
Query: 265 C-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGV 441
S V NM+ GV++G++ ++ V + + +GN IIE+ LG + +++ V
Sbjct: 73 YRSLVHNMVVGVSEGYKKELELVGVGYR---ASNQGN-IIELA--LGYTHNIFIQLPAEV 126
Query: 442 TV-VNSPKQKDELII 483
V S + K+ LII
Sbjct: 127 KVETKSERNKNPLII 141
>UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex
pyrophilus|Rep: 50S ribosomal protein L6 - Aquifex
pyrophilus
Length = 187
Score = 38.3 bits (85), Expect = 0.16
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 112 KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 288
K VTV+GP+G L+ N H + + + R +K+++ A T+ + ++NMI
Sbjct: 22 KEHKVTVEGPKGKLELNI-HPDIKVTLNQQERWIKLDRPSDRSFHKAIHGTMAALIKNMI 80
Query: 289 KGVTKGF 309
KGVT+GF
Sbjct: 81 KGVTEGF 87
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 37.5 bits (83), Expect = 0.28
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 97 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC-SH 273
++V + VTVKGP+G LKR V + V+ ++ K++ +C +
Sbjct: 15 VSVSLDGLAVTVKGPKGELKRTLPD-GVTVNQVDNTIVVAPT--SEKRQSRERHGLCRTL 71
Query: 274 VENMIKGVTKGFQYKMRAV 330
V NMI+GV+KG+ K+ V
Sbjct: 72 VANMIEGVSKGYSKKLEIV 90
>UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4;
Mycoplasma|Rep: 50S ribosomal protein l6 - Mycoplasma
mobile
Length = 179
Score = 36.3 bits (80), Expect = 0.64
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Frame = +1
Query: 103 VHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVE 279
+++K+ LV +KG GVL N L A+++ + ++ + +K+ ++ +E
Sbjct: 17 LNIKNNLVEIKGKLGVLTFNVNPLIAIEVENHEVKTIRANEEKHTKQLHGTTNSI---IE 73
Query: 280 NMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSP 459
NMI GV+KGF+ ++ + + S IEI G ++ V + P V P
Sbjct: 74 NMIIGVSKGFKKELEIK----GVGYKSALKGSQIEIA--AGYSHLVYVNV-PKELKVEIP 126
Query: 460 KQKDELIIEGNSLEDVSSSAALIQQSTT 543
K ++II G + V AA+I++ T
Sbjct: 127 K-PTQIIISGIDNQKVGELAAVIRKVRT 153
>UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L6 - Aquifex
aeolicus
Length = 183
Score = 35.5 bits (78), Expect = 1.1
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 112 KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 288
K + V+GP+G L+ N H + + + R +K+++ A T+ + V+NMI
Sbjct: 22 KEHKIVVEGPKGKLELNV-HPDIKVTVNQQERWIKLDRPTDRSFHKAIHGTMAALVKNMI 80
Query: 289 KGVTKGF 309
KGVT+GF
Sbjct: 81 KGVTEGF 87
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +1
Query: 97 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 276
+ + ++ + V G G L F H + ++ N + L V + + A + T CS +
Sbjct: 17 IQITIQDCCILVVGVLGNLSYKF-HNFIGVQFSNVKNLIVYSRYRNHVNRALLGTTCSLI 75
Query: 277 ENMIKGVTKGFQYKMRAV 330
+MI GVT+GF K++ +
Sbjct: 76 NSMIVGVTEGFVKKLQLI 93
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 35.1 bits (77), Expect = 1.5
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G+ + +VTVKGP+G L R F ++IR V + + + SK+ T +
Sbjct: 14 GVELANNDNVVTVKGPKGELTREFSK-DIEIR-VEGTEITLHRPNDSKEMKTIHGTTRAL 71
Query: 274 VENMIKGVTKGF--QYKMRAV 330
+ NM+ GV++GF + +MR V
Sbjct: 72 LNNMVVGVSEGFKKELEMRGV 92
>UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15;
Bacteria|Rep: 50S ribosomal protein L6 - Chlorobium
tepidum
Length = 179
Score = 35.1 bits (77), Expect = 1.5
Identities = 24/73 (32%), Positives = 35/73 (47%)
Frame = +1
Query: 103 VHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVEN 282
V VK ++ V GP+G L + I V + V++ SK+ A V N
Sbjct: 17 VEVKENMINVTGPKGALSQALVDEV--IVSVADGAVTVQRKDDSKRARAMHGLYRMLVSN 74
Query: 283 MIKGVTKGFQYKM 321
M++GVTKGF K+
Sbjct: 75 MVEGVTKGFTRKL 87
>UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular
organisms|Rep: 50S ribosomal protein L6 - Lyngbya sp.
PCC 8106
Length = 181
Score = 34.3 bits (75), Expect = 2.6
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 1/146 (0%)
Frame = +1
Query: 97 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV-RTVCSH 273
+T ++ + + VKGP+G L R + + + L+K ++L + RT+
Sbjct: 15 VTFTIEGQHIIVKGPKGELSRVLPEKVILEQDGDTLLVKRRDESRVARQLHGLSRTL--- 71
Query: 274 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVN 453
V NM+ GV+KGF+ ++ + +G ++I L Y + V+M P +
Sbjct: 72 VANMVDGVSKGFEKRLEIQGVGYR---AQVQGKNLI-----LNVGYSKPVEMNPPQGITV 123
Query: 454 SPKQKDELIIEGNSLEDVSSSAALIQ 531
+ + +II G E V + AA I+
Sbjct: 124 AVENNTNVIISGIDKEVVGNIAAQIR 149
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 34.3 bits (75), Expect = 2.6
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -3
Query: 290 LIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRR 117
L +F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLR 81
Query: 116 DFT 108
F+
Sbjct: 82 CFS 84
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 34.3 bits (75), Expect = 2.6
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 97 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC-SH 273
+ V + VTVKGP+G LKR V + V+ ++ +K+ +C +
Sbjct: 15 VNVTLSGLAVTVKGPKGELKRTLPS-GVSVNQVDNSIVVAPT--STKRSSRERHGLCRTL 71
Query: 274 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVN 453
V NM+ GV++G+ K+ V + +G +++ + Y V++ P +
Sbjct: 72 VANMVIGVSQGYSKKLEIVGVG---SRAQVKGKTLV-----VSAGYSHPVEVVPPEGITF 123
Query: 454 SPKQKDELIIEGNSLEDVSSSAALIQ 531
+ + + + G E V + AA I+
Sbjct: 124 TVENNTNVTVSGTDKELVGNEAAKIR 149
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 33.9 bits (74), Expect = 3.4
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCS 270
G+ V + V + GP+G L + FK ++A+ ++ L V+ +K A T S
Sbjct: 14 GVKVGLNDLEVKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKNARAMWGTARS 70
Query: 271 HVENMIKGVTKGFQYKM 321
+ NMI GV +GF+ K+
Sbjct: 71 IICNMITGVKEGFKLKL 87
>UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protein;
n=1; Ralstonia solanacearum|Rep: Putative
surface-exposed adhesin protein - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 1309
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 490 NSLEDVSSSAALIQQSTTVKNKDIRKFLDG 579
NS++ +SSSA+L+QQS K+ + K LDG
Sbjct: 150 NSIKSISSSASLVQQSAAGKDITVAKDLDG 179
>UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 113
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = -2
Query: 609 HNSCFLRYIKTIQELSDILILDCSRLLNESSRARDIFQR 493
+N+C LR IK + L+ +L + SRL N SR RD+F++
Sbjct: 25 NNNCKLRQIKPVPNLTRLL--EESRLTNSLSRLRDVFKK 61
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 33.5 bits (73), Expect = 4.5
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC-S 270
G+ V + VTVKGP+G L R+F+ V I L+ G+ K + + +
Sbjct: 14 GIKVDINGNDVTVKGPKGTLSRSFRP-EVTINREGDYLVVAP--VGTDKATRSFFGLSRT 70
Query: 271 HVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV 450
++NMI GV GF + V + +G+ ++ + V +AP +
Sbjct: 71 LLDNMIVGVKDGFDKNLEIVGVGMRAD---KDGDKVV-----FKVGFSHSVTVAPPAGIT 122
Query: 451 NSPKQKDELIIEGNSLEDVSSSAALIQ 531
S ++ + G + EDV AA I+
Sbjct: 123 LSVDGTTKVKVSGINKEDVGQMAAEIR 149
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 33.1 bits (72), Expect = 6.0
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 103 VHVKSR-LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR-TVCSHV 276
V +K R ++V+GP+G L+ F H + + N + K + + + T + +
Sbjct: 17 VDIKDRNFISVEGPKGKLEYQFNHR---LTITNENKVITVKRPNDEIFMKKIHGTTRALL 73
Query: 277 ENMIKGVTKGFQYKMRAV 330
NM++GV+KGFQ ++ V
Sbjct: 74 SNMVEGVSKGFQKTLKIV 91
>UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolytica
HM-1:IMSS|Rep: ankyrin - Entamoeba histolytica HM-1:IMSS
Length = 866
Score = 32.7 bits (71), Expect = 7.9
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +1
Query: 160 NFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAH 339
+F LAVD ++N +L+K + ++K + T+ HV +K + G Y Y
Sbjct: 683 DFPELAVDDEILNKKLIKYNNEWNAQKRMEIFSTIVGHVGEHVKMI--GPFYCNFGRYIS 740
Query: 340 FPINCVTTEGNSIIE 384
NC+ +I+E
Sbjct: 741 IGDNCIINFNCTILE 755
>UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1;
Psychromonas sp. CNPT3|Rep: 50S ribosomal protein L6 -
Psychromonas sp. CNPT3
Length = 128
Score = 32.7 bits (71), Expect = 7.9
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G+ V V + +T+KG +G L R AV +++ + ++ G K A T ++
Sbjct: 14 GVEVKVNGQEITLKGGKGELVRTLND-AVVVKLEDG-VITFAPVEGIKDAWAQAGTARAN 71
Query: 274 VENMIKGVTKGFQ 312
V NM+ GVT GF+
Sbjct: 72 VNNMMIGVTTGFK 84
>UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=1;
Theileria annulata|Rep: Glutamate-cysteine ligase,
putative - Theileria annulata
Length = 795
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 442 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRK 567
TVV P + ++ G+S+ED + + +++TT KDI K
Sbjct: 76 TVVTGPTTTNSTVVPGSSMEDSTVPNTVTEENTTTTTKDIIK 117
>UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16;
Bacteria|Rep: 50S ribosomal protein L6 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 177
Score = 32.7 bits (71), Expect = 7.9
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = +1
Query: 94 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 273
G+ V + + VTVKGP+G L V+++ LL + +K+ +
Sbjct: 14 GVQVTLAGQTVTVKGPKGQLSWTIAD-EVEVKQEGAELLLAPR-VDTKRAKGMWGLSRTL 71
Query: 274 VENMIKGVTKGFQYKMRAV 330
V NM+ GVT GF+ + V
Sbjct: 72 VANMVHGVTVGFEESLELV 90
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,802,492
Number of Sequences: 1657284
Number of extensions: 12523764
Number of successful extensions: 30509
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 29640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30451
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -