Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_I11
(846 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09020.1 68414.m01006 protein kinase, putative similar to pro... 83 2e-16
At4g34120.1 68417.m04840 CBS domain-containing protein contains ... 34 0.10
At1g69800.1 68414.m08031 CBS domain-containing protein low simil... 33 0.18
At3g48530.1 68416.m05299 CBS domain-containing protein low simil... 31 1.3
At4g27595.1 68417.m03964 protein transport protein-related low s... 30 1.7
At4g36910.1 68417.m05232 CBS domain-containing protein contains ... 29 2.9
At2g41900.1 68415.m05183 zinc finger (CCCH-type) family protein ... 29 2.9
At1g15330.1 68414.m01834 CBS domain-containing protein low simil... 29 2.9
At5g07400.1 68418.m00847 forkhead-associated domain-containing p... 29 5.1
At2g36310.1 68415.m04457 inosine-uridine preferring nucleoside h... 29 5.1
At1g80090.1 68414.m09375 CBS domain-containing protein low simil... 29 5.1
At5g10860.1 68418.m01261 CBS domain-containing protein contains ... 28 6.8
At3g25840.1 68416.m03219 protein kinase family protein contains ... 28 9.0
At3g06340.1 68416.m00731 DNAJ heat shock N-terminal domain-conta... 28 9.0
At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containi... 28 9.0
>At1g09020.1 68414.m01006 protein kinase, putative similar to
protein kinase AKINbetagamma-2 [Zea mays] GI:11139548,
AKINbetagamma-1 [Zea mays] GI:11139546; contains Pfam
profile PF00571: CBS domain
Length = 487
Score = 83.0 bits (196), Expect = 2e-16
Identities = 60/165 (36%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Frame = +1
Query: 295 LPVADPFLEKV---SLSDLEEDESQIFVKFFKFHKCYDLIPTSAKLVVFDTQLLVKKAFF 465
L ADP E V S DLE +I V Y+L+P S K++ D L VK+AF
Sbjct: 128 LRTADPSQEAVPRMSGVDLELSRHRISV-LLSTRTAYELLPESGKVIALDVNLPVKQAFH 186
Query: 466 ALVYNGVRAAPLWDSNQQQFVGMLTITDFIKILQMYYT-SPDVKMEELEEHRLETWR--- 633
L G+ APLWD + QFVG+L DFI IL+ T ++ EELE H + W+
Sbjct: 187 ILYEQGIPLAPLWDFGKGQFVGVLGPLDFILILRELGTHGSNLTEEELETHTIAAWKEGK 246
Query: 634 ----RVLKGS----VMPLVSIGPDSSLFEAIRMLITNRIHRLPVI 744
R GS PLV +GP +L + ++ N++ +PVI
Sbjct: 247 AHISRQYDGSGRPYPRPLVQVGPYDNLKDVALKILQNKVAAVPVI 291
>At4g34120.1 68417.m04840 CBS domain-containing protein contains
Pfam profile PF00571: CBS domain
Length = 238
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 601 ELEEHRLETWRRVLKGSVMPLVSIGPDSS-LFEAIRMLITNRIHRLPVIDPDTGNVLYIL 777
EL++ +T+ +V+ + P + DS+ L +A R+L+ + RLPV+D D G ++ IL
Sbjct: 160 ELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDAD-GKLIGIL 218
Query: 778 THKRIL 795
T ++
Sbjct: 219 TRGNVV 224
>At1g69800.1 68414.m08031 CBS domain-containing protein low
similarity to SP|Q9UGI9 5'-AMP-activated protein kinase,
gamma-3 subunit (AMPK gamma-3 chain) (AMPK gamma3) {Homo
sapiens}; contains Pfam profile PF00571: CBS domain
Length = 447
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/127 (17%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +1
Query: 418 KLVVFDTQLLVKKAFFALVYNGVRAAPLWDSNQQQFVGMLTITDFIKILQMYYTSPDVKM 597
+++ +++ L+ +AF + N + P+ + ++ VG +++ D +L + +
Sbjct: 296 EVISIESEELILEAFKRMRDNNIGGLPVVEGLNKKIVGNISMRDIRYLLLQPEVFSNFRQ 355
Query: 598 EELEEHRLETWRRVLK-GSVMPLVSIGPDSSLFEAIRMLITNRIHRLPVIDPDTGNVLYI 774
++ + + G +P ++ PDS+L I L + +HR+ V D + +
Sbjct: 356 LTVKSFATKIATAGEEYGLAIPAITCRPDSTLGSVINSLASRSVHRVYVAAGDENELYGV 415
Query: 775 LTHKRIL 795
+T + ++
Sbjct: 416 ITLRDVI 422
>At3g48530.1 68416.m05299 CBS domain-containing protein low
similarity to SP|Q9UGI9 5'-AMP-activated protein kinase,
gamma-3 subunit (AMPK gamma-3 chain) (AMPK gamma3) {Homo
sapiens}; contains Pfam profile PF00571: CBS domain
Length = 424
Score = 30.7 bits (66), Expect = 1.3
Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Frame = +1
Query: 448 VKKAFFALVYNGVRAAPLWDSNQQQFVGMLTITDFIKIL---QMY--YTSPDVK--MEEL 606
V +AF + + P+ + N ++ VG +++ D +L ++Y Y S K + +
Sbjct: 277 VLQAFKLMRRKRIGGIPVIERNSEKPVGNISLRDVQFLLTAPEIYHDYRSITTKNFLVSV 336
Query: 607 EEHRLETWRRVLKGSVMPLVSIGPDSSLFEAIRMLITNRIHRLPVIDPDTGNVLYILTHK 786
EH LE + +++ + +L E I ML +IHR+ V+D D GN+ ++T +
Sbjct: 337 REH-LEKCGDTSAPIMSGVIACTKNHTLKELILMLDAEKIHRIYVVD-DFGNLEGLITLR 394
Query: 787 RIL 795
I+
Sbjct: 395 DII 397
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -1
Query: 528 NELLLVRVPQRGGSHAIVNKGEESLLDQELR-VEHDQLRRGWYQIVALVKLEELDEYL 358
N+ L VR ++K +ESLLD+EL+ V HD + AL K+EEL + L
Sbjct: 1005 NQELKVREASAAKRIEELSKMKESLLDKELQTVIHDNYELKAREASALKKIEELSKLL 1062
>At4g36910.1 68417.m05232 CBS domain-containing protein contains
Pfam profile PF00571: CBS domain
Length = 236
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 670 IGPDSSLFEAIRMLITNRIHRLPVIDPD 753
+ P +++ EA+ +L+ NRI PVID D
Sbjct: 90 VKPTTTVDEALELLVENRITGFPVIDED 117
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +1
Query: 658 PLVSIGPDSSLFEAIRMLITNRIHRLPVIDPDTGNVLYILTHKRIL 795
PLV + ++L +A ++L+ + RLPV+D D G ++ I+T ++
Sbjct: 179 PLV-VEEKTNLEDAAKILLETKYRRLPVVDSD-GKLVGIITRGNVV 222
>At2g41900.1 68415.m05183 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar) and Pfam domain,
PF00023: Ankyrin repeat
Length = 716
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 383 NLKNLTNICDSSSSKSERLTFSRNGSATGSPLES 282
NL+ +TN+ + SSS T GS +GSPL S
Sbjct: 197 NLRVVTNVPNRSSSPCHSPTGENGGSGSGSPLGS 230
>At1g15330.1 68414.m01834 CBS domain-containing protein low
similarity to SP|Q9MYP4 5'-AMP-activated protein kinase,
gamma-3 subunit (AMPK gamma-3 chain) (AMPK gamma3) {Sus
scrofa}; contains Pfam profile PF00571: CBS domain
Length = 352
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 646 GSVMPLVSIGPDSSLFEAIRMLITNRIHRLPVID 747
G +VS G +S++ EAI ++T +HR+ V+D
Sbjct: 296 GKEREVVSCGVESTMEEAIEKVVTRGVHRVWVMD 329
>At5g07400.1 68418.m00847 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 1084
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 133 SVNYTIGAHLRRAASQQAEKRRSSLGNVPVNRHRASDAFLDPHHAAIL 276
S N + GA L+R AS R +SLG + + R ++ DP+ +L
Sbjct: 627 SANDSTGAQLKRLASYIRRTRENSLGMLELVLRRNTNVPADPNAVRVL 674
>At2g36310.1 68415.m04457 inosine-uridine preferring nucleoside
hydrolase family protein similar to Chain A, Crystal
Structure Of Nucleoside Hydrolase From Leishmania
MajorGI:8569431; contains Pfam profile PF01156:
Inosine-uridine preferring nucleoside hydrolase
Length = 336
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 477 QWRASRPAVGLEPAAVRWYADYNGLHQDTTDVLHEP 584
+W S P VG P +V W D G+ + L +P
Sbjct: 301 RWNGSNPWVGYSPISVAWTVDVEGVLEYVKAKLMKP 336
>At1g80090.1 68414.m09375 CBS domain-containing protein low
similarity to SP|Q9MYP4 5'-AMP-activated protein kinase,
gamma-3 subunit (AMPK gamma-3 chain) (AMPK gamma3) {Sus
scrofa}; contains Pfam profile PF00571: CBS domain
Length = 402
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 661 LVSIGPDSSLFEAIRMLITNRIHRLPVIDPDTG 759
LV+ S+L + I M+ T R+HR+ V+D + G
Sbjct: 344 LVTCHVTSTLAQVIHMVTTKRVHRVWVVDQNGG 376
>At5g10860.1 68418.m01261 CBS domain-containing protein contains
Pfam profile PF00571: CBS domain
Length = 206
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +1
Query: 661 LVSIGPDSSLFEAIRMLITNRIHRLPVI 744
L+++ P++ + A++++ NRI +PVI
Sbjct: 142 LITVTPETKVLRAMQLMTDNRIRHIPVI 169
>At3g25840.1 68416.m03219 protein kinase family protein contains
Pfam profile: PF00069 eukaryotic protein kinase domain
Length = 935
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +1
Query: 469 LVYNGVRAAPLWDSNQQQFVGMLTITDFIKILQMYYTSPDVKMEELEEHRLETW 630
LV G L D F G +T ++ + +Y SP++ + +H L+ W
Sbjct: 755 LVNEGKNVLKLCDFGNAMFAGKNEVTPYL--VSRFYRSPEIILGLTYDHPLDIW 806
>At3g06340.1 68416.m00731 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 673
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 510 RVPQRGGSHAIVNKGEESLLDQELRVEHDQLRRGWYQIVA-LVKLEELDEY 361
++P + ++ + + LLD+E R HD R+ W + A K +++ Y
Sbjct: 100 KLPGAESAFKLIGEAQRILLDREKRTLHDNKRKTWRKPAAPPYKAQQMPNY 150
>At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 786
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 535 LTITDFIKILQMYYTSPDVKMEEL-EEHRLETWRRVLKGSVMPLVSIGPDS 684
LT T+ K+L++ + K+E+ EH ET V K MP V I PD+
Sbjct: 287 LTKTELDKVLEVPGSETISKLEDRPSEHLSETSMNVEKELEMPAVEILPDN 337
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,650,533
Number of Sequences: 28952
Number of extensions: 393855
Number of successful extensions: 1118
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1960634400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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