Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_I10
(537 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g32470.1 68417.m04622 ubiquinol-cytochrome C reductase comple... 56 1e-08
At5g25450.1 68418.m03023 ubiquinol-cytochrome C reductase comple... 54 5e-08
At4g32470.2 68417.m04623 ubiquinol-cytochrome C reductase comple... 49 2e-06
At5g48990.1 68418.m06061 kelch repeat-containing F-box family pr... 37 0.007
At1g13420.1 68414.m01566 sulfotransferase family protein similar... 31 0.49
At5g28150.1 68418.m03402 expressed protein 30 0.85
At1g55660.1 68414.m06371 F-box family protein contains F-box dom... 29 1.5
At3g48830.1 68416.m05333 polynucleotide adenylyltransferase fami... 29 2.0
At4g17220.1 68417.m02590 expressed protein 29 2.6
At2g22720.3 68415.m02692 expressed protein 28 3.4
At2g22720.2 68415.m02691 expressed protein 28 3.4
At2g22720.1 68415.m02693 expressed protein 28 3.4
At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP1... 28 4.5
At1g74600.1 68414.m08641 pentatricopeptide (PPR) repeat-containi... 28 4.5
At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-proly... 27 6.0
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 27 6.0
At1g21600.1 68414.m02700 expressed protein similar to hypothetic... 27 6.0
At4g30020.1 68417.m04272 subtilase family protein contains simil... 27 7.9
At2g12900.1 68415.m01408 hypothetical protein similar to transcr... 27 7.9
>At4g32470.1 68417.m04622 ubiquinol-cytochrome C reductase complex
14 kDa protein, putative similar to SP|P48502
Ubiquinol-cytochrome C reductase complex 14 kDa protein
(EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam
profile PF02271: Ubiquinol-cytochrome C reductase
complex 14kD subunit
Length = 122
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +3
Query: 183 KYGLLRDDCLHE--TPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKYEE 356
+YGL DD + + D+ EA+ RLP VVD RN R+ RA+ LSM+ LPK+
Sbjct: 30 RYGLRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLPKDLQAVQTP 89
Query: 357 DSLYLTPIVEQVEKERLERE 416
YL ++ VE+E ERE
Sbjct: 90 FRGYLQDMLALVERESKERE 109
>At5g25450.1 68418.m03023 ubiquinol-cytochrome C reductase complex
14 kDa protein, putative similar to SP|P48502
Ubiquinol-cytochrome C reductase complex 14 kDa protein
(EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam
profile PF02271: Ubiquinol-cytochrome C reductase
complex 14kD subunit
Length = 122
Score = 54.4 bits (125), Expect = 5e-08
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +3
Query: 183 KYGLLRDDC---LHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKYE 353
+YGL DD L++ D+ EAL RLP +VD RN R++RA+ LSM+ LP
Sbjct: 30 RYGLRYDDLYDPLYDL-DIKEALNRLPREIVDARNQRLMRAMDLSMKHEYLPDNLQAVQT 88
Query: 354 EDSLYLTPIVEQVEKERLERE 416
YL ++ V++ER ERE
Sbjct: 89 PFRSYLQDMLALVKRERAERE 109
>At4g32470.2 68417.m04623 ubiquinol-cytochrome C reductase complex
14 kDa protein, putative similar to SP|P48502
Ubiquinol-cytochrome C reductase complex 14 kDa protein
(EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam
profile PF02271: Ubiquinol-cytochrome C reductase
complex 14kD subunit
Length = 101
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +3
Query: 183 KYGLLRDDCLHE--TPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKE 335
+YGL DD + + D+ EA+ RLP VVD RN R+ RA+ LSM+ LPK+
Sbjct: 30 RYGLRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLPKD 82
>At5g48990.1 68418.m06061 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 372
Score = 37.1 bits (82), Expect = 0.007
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 1 WQLLXSLGSFLVVCVIIPLKSSICASXKWLXSQLPXWLSEPRL-LTEVTASANGPTIFRD 177
W L ++GS+L + +K S C++ +L + WL PRL L + + NG T F
Sbjct: 123 WSSLVAVGSYLYA-ITADIKDSPCSNVWYLDCRTHTWLDSPRLRLAHINSDFNGRTYFPG 181
Query: 178 S 180
S
Sbjct: 182 S 182
>At1g13420.1 68414.m01566 sulfotransferase family protein similar to
steroid sulfotransferase 1 GI:3420004 from (Brassica
napus); contains Pfam profile PF00685: Sulfotransferase
domain
Length = 331
Score = 31.1 bits (67), Expect = 0.49
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +1
Query: 235 KHSADFHPMLLTRETSVLYVPYSSPCKKQSYLKKSGQNMKKIPYT*PQLLS 387
KH++D HP LLT L VPY + YLK S ++ K+P + P+L S
Sbjct: 98 KHTSDNHP-LLTHNPHEL-VPY---LELDLYLKSSKPDLTKLPSSSPRLFS 143
>At5g28150.1 68418.m03402 expressed protein
Length = 289
Score = 30.3 bits (65), Expect = 0.85
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -3
Query: 376 GVKYRESSSYFVHSSLGR-IVFCMESCMARTIRKFLSSTTWDGSLRSASVTSGV--SCKQ 206
GV+ +SSS + +V C+ C R R L + TW +L SVT GV SC Q
Sbjct: 12 GVQVADSSSSSNSGKNAQNLVTCIYQCRIRG-RNCLITVTWTKNLMGQSVTVGVDDSCNQ 70
Query: 205 S 203
S
Sbjct: 71 S 71
>At1g55660.1 68414.m06371 F-box family protein contains F-box domain
Pfam:PF00646
Length = 492
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 31 LVVCVIIP-LKSSICASXKWLXSQLPXWL 114
+ +CVIIP L S +C+ WL Q+P +L
Sbjct: 1 MFLCVIIPCLCSYLCSLFSWLLGQIPSFL 29
>At3g48830.1 68416.m05333 polynucleotide adenylyltransferase family
protein / RNA recognition motif (RRM)-containing protein
similar to SP|P13685 Poly(A) polymerase (EC 2.7.7.19)
{Escherichia coli O157:H7}; contains Pfam profiles
PF01743: polyA polymerase family protein, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 881
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 282 RIVRAIQLSMQKTILPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEK 428
RI ++ + QK +PK++ + ED L PI+++ KE E E E+
Sbjct: 466 RIFECVKENGQKGFVPKQDSKREPEDDLETKPILKK-HKENSEEENKEQ 513
>At4g17220.1 68417.m02590 expressed protein
Length = 513
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 198 RDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKYEEDSLYLTP 377
++D L EALRR+ +H D+ + + I + + K E + +ED L
Sbjct: 82 KEDALAAQDAAEEALRRVYTHQQDDDSLPLESIIAPLESQIKIHKHEISALQEDKKALER 141
Query: 378 IVEQVEKERLEREQ 419
+ + E LE E+
Sbjct: 142 LTKSKESALLEAER 155
>At2g22720.3 68415.m02692 expressed protein
Length = 569
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = +3
Query: 309 MQKTILPKEEWTKYEEDSLYLTPIVEQVEKE-----RLEREQWEKE 431
M + +LP + +++Y++D + + E ++KE R+ RE+ E+E
Sbjct: 503 MLRQLLPPKRFSRYDDDDINMEAGFEDIQKEERRSARIAREEDERE 548
>At2g22720.2 68415.m02691 expressed protein
Length = 672
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = +3
Query: 309 MQKTILPKEEWTKYEEDSLYLTPIVEQVEKE-----RLEREQWEKE 431
M + +LP + +++Y++D + + E ++KE R+ RE+ E+E
Sbjct: 606 MLRQLLPPKRFSRYDDDDINMEAGFEDIQKEERRSARIAREEDERE 651
>At2g22720.1 68415.m02693 expressed protein
Length = 340
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = +3
Query: 309 MQKTILPKEEWTKYEEDSLYLTPIVEQVEKE-----RLEREQWEKE 431
M + +LP + +++Y++D + + E ++KE R+ RE+ E+E
Sbjct: 274 MLRQLLPPKRFSRYDDDDINMEAGFEDIQKEERRSARIAREEDERE 319
>At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 968
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 270 ERNFRIVRAIQLSMQKTILPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEKEY 434
ER RI + L +K E+W L I E++++ LE +Q E+EY
Sbjct: 515 ERLNRIETELVLLKEKQAELTEQWEHERSVMSRLQSIKEEIDRVNLEIQQAEREY 569
>At1g74600.1 68414.m08641 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 895
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 156 WAYNLSGFNKYGLLRD 203
WA +SGFN+YG LR+
Sbjct: 519 WASMISGFNEYGYLRE 534
>At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein SP:Q9M222; similar to
FKBP-type peptidyl-prolyl cis-trans isomerase fkpA
precursor (PPiase) (Rotamase)(SP:Q8X880) [Escherichia
coli O157:H7] ; contains Pfam PF00254: peptidyl-prolyl
cis-trans isomerase, FKBP-type
Length = 242
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 280 SVLYVPYSSPCKKQSYLKKSGQNMKKIPYT*PQLLSKLRKRGWRESS 420
S++YV +SPC L S + K PY +LL + KR RE++
Sbjct: 47 SLVYVLVASPCLLLPALSSSAKTKSKSPYDERRLLEQ-NKRIQRENN 92
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 201 DDCLHETPDVTEALRR-LPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKY 350
DD +H E RR +PS ++ +IVRAI+ K P+EE Y
Sbjct: 242 DDAIHPLSSAPEPKRRFIPSKWEAKKVVKIVRAIRKGWIKFDKPEEEPNVY 292
>At1g21600.1 68414.m02700 expressed protein similar to hypothetical
protein GB:AAD41412 GI:5263310 from [Arabidopsis
thaliana]
Length = 328
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 276 NFRIVRAIQLSMQKTILPKEEWTKYEED 359
+F+I+ + T++ +EEWTK ED
Sbjct: 284 SFKIIHVGERDDPTTVIEREEWTKTRED 311
>At4g30020.1 68417.m04272 subtilase family protein contains
similarity to meiotic serine proteinase TMP GI:6468325
from [Lycopersicon esculentum]
Length = 816
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 192 LLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEW 341
L+ H +PD E LRR P +R++++ + + Q LP + W
Sbjct: 92 LINGFAAHVSPDQAEMLRRAPGVKSVDRDWKVRKLTTHTPQFLGLPTDVW 141
>At2g12900.1 68415.m01408 hypothetical protein similar to
transcription factor(bZIP family) VSF-1 GI:3425907 from
[Lycopersicon esculentum]
Length = 264
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 282 GSFSRQQHGMEVCGVLQLHQEFHASN 205
GS Q+ ME C VLQ +EF SN
Sbjct: 217 GSVELQRLKMETCEVLQYRREFDRSN 242
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,789,704
Number of Sequences: 28952
Number of extensions: 182308
Number of successful extensions: 575
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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