Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_I07
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   2.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.8  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   8.3  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 131 IEKTVKQVQNILQSHSELPRLTREEIIQLMND 226
           + KT   ++N+L  +     LTR +  +L ND
Sbjct: 104 VHKTTLTIENLLADYDFSETLTRAKFEELNND 135


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -3

Query: 298 CDFNFIALFTALFRC*RFFVFSFDIIHQLYDL 203
           CD N I  F  + RC    +F + I    Y +
Sbjct: 377 CDINSIQYFCLMARCLNTLIFYYHISTYEYSI 408


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 80  FLWYFIAVMTVAESAVDIEKTVKQVQNIL 166
           F WY     T  + AV +   VKQV   L
Sbjct: 264 FRWYKFVEGTTRKQAVTLNDRVKQVAGTL 292


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 307 VRCCDFNFIALFTALFRC 254
           V CCD NF      +F C
Sbjct: 160 VYCCDNNFNVFLRQVFTC 177


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 116 ESAVDIEKTVKQVQNILQSHSELPRLTREEII 211
           E A  +E TVK +QN+ +  + +   T   ++
Sbjct: 76  EKADILEMTVKHLQNLQRQQAAMSAATDPSVV 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,607
Number of Sequences: 336
Number of extensions: 3266
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)