Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_I07
         (777 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967...    33   0.33 
10_06_0163 - 11351134-11351291,11354159-11354360                       30   2.4  
05_05_0030 - 21698625-21698752,21699589-21699627,21699708-216998...    29   4.1  
08_01_0870 - 8491020-8491109,8491523-8491660,8492442-8492568,849...    28   7.2  
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541...    28   9.5  

>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
            16196822-16197001,16197090-16197371,16197471-16199141,
            16199257-16199463,16199566-16199700,16199792-16200082,
            16200403-16200621,16200876-16201034,16201120-16201181,
            16201257-16201383,16201460-16201693,16201777-16202003,
            16202163-16202257,16202341-16202468,16202574-16202594,
            16202765-16202921,16203007-16203075,16203228-16203341,
            16203415-16203491,16203576-16203688,16204432-16204507,
            16204592-16204756,16204825-16204952,16205049-16205130,
            16205426-16205548,16205633-16205860,16205933-16206034,
            16206144-16206341,16206581-16206760,16206868-16207020,
            16207690-16207797,16208201-16208355,16208786-16208912,
            16209825-16209914,16209986-16210127,16210303-16210379,
            16210467-16210582,16210638-16210773,16211130-16211198,
            16211279-16211361,16211655-16211720,16211788-16211974,
            16212054-16213547,16213635-16214165,16214234-16214363,
            16214407-16215878,16216359-16216364,16216750-16217055,
            16217364-16217468,16217577-16217772,16217862-16217929,
            16218853-16220631,16221026-16221151,16221604-16221780,
            16221997-16222128,16223461-16223498,16223710-16223788,
            16224175-16224284,16224787-16224935,16225027-16225197,
            16225281-16225552,16226355-16226442,16227942-16228369
          Length = 5157

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +2

Query: 332  SVTQTLKNEEILLINDVASVQPDTLEATTKKSEPSLTVVLPYTPRDGSSLQELYTRP 502
            S+ Q +KN ++ LI++++      LE      EP   +V     + GS L+++   P
Sbjct: 1371 SLVQAMKNGDLFLIDEISLADDSVLERLNSVLEPERKLVNSLAEKGGSVLEKVVAHP 1427


>10_06_0163 - 11351134-11351291,11354159-11354360
          Length = 119

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
 Frame = +2

Query: 284 EIKITTPYSTSDNEI--YSVTQTLKNEEILLINDVASVQPDTLEATTKKSEPSLTVVLPY 457
           +IK+ +P  T+  E   Y+V   L N+  +L+N + ++    ++ T  + +   +V LP 
Sbjct: 8   KIKMMSPKMTNQREKIDYAVYHALINQSGVLVNTLTNMIKSVVDGTIAEHQAKGSVFLP- 66

Query: 458 TPRDGSSLQELYTRPPRVEIVPASEVTPQPIKTSD 562
              D + L+ L  R   + ++P +  T  P+ T++
Sbjct: 67  -EGDETELRMLAMRTALMLMLPNAS-TSMPVTTAN 99


>05_05_0030 -
           21698625-21698752,21699589-21699627,21699708-21699822,
           21699927-21699992,21701064-21701203,21701424-21701473,
           21701608-21702045,21702757-21702839,21702941-21702977,
           21703366-21703457,21703531-21703615,21703950-21704029,
           21704049-21704105,21704350-21704747,21706322-21707223,
           21707331-21707421,21708123-21710273,21710375-21710813,
           21711180-21711299
          Length = 1836

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 231 KLKTKKRQHRNKAVKRAMKLKSQHLTVHQTMKYIQ*RRR*KMRK 362
           KLKT++R+HR K ++     K Q  T  +     Q  +R  +RK
Sbjct: 358 KLKTRRRKHRPKVIREDRPAKKQMATTSEEKPLNQKPKRKYVRK 401


>08_01_0870 -
           8491020-8491109,8491523-8491660,8492442-8492568,
           8492667-8492801,8493262-8493731
          Length = 319

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 101 VMTVAESAVDIEKTVKQVQNILQSHSELPRLTREEII 211
           +M +AE   D+E+  K + + L+S+ +LP L    +I
Sbjct: 261 LMEMAEHKKDLERKTKPIADTLRSYQDLPPLLSYHVI 297


>02_02_0464 -
           10552347-10552466,10552683-10552928,10553866-10554135,
           10554231-10554413,10554493-10554688,10554775-10555079,
           10555515-10555604,10555689-10555806,10555991-10556088,
           10556187-10556272,10557622-10557736
          Length = 608

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 61  KFTAHSTFSFRVDPTTHRP 5
           +F +H   +FR DPTT+RP
Sbjct: 566 RFLSHLDVTFRKDPTTYRP 584


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,589,027
Number of Sequences: 37544
Number of extensions: 311414
Number of successful extensions: 728
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)