BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_F_I07 (777 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF003137-6|AAB93644.1| 497|Caenorhabditis elegans Hypothetical ... 29 4.9 Z46933-6|CAA87038.3| 321|Caenorhabditis elegans Hypothetical pr... 28 6.5 Z46829-2|CAA86863.3| 321|Caenorhabditis elegans Hypothetical pr... 28 6.5 AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 28 8.6 >AF003137-6|AAB93644.1| 497|Caenorhabditis elegans Hypothetical protein C27A12.7a protein. Length = 497 Score = 28.7 bits (61), Expect = 4.9 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Frame = +2 Query: 311 TSDNEIYSVTQTLKNEEILLINDVASVQPDTLEATTK---KSEPSLTVVL--PYTPRDGS 475 TSDN+ + K+E +L ND+ + +T A + + +P + +L Y S Sbjct: 37 TSDNDTSYAKEDKKSENEVLDNDLLEAEMNTTIADVQAVLQVDPGVCRILLHKYKWNKES 96 Query: 476 SLQELYTRPPRVEIVPASEVTPQ 544 L+ LY P + + ++V P+ Sbjct: 97 LLERLYEHPDTIAFLIDAQVIPR 119 >Z46933-6|CAA87038.3| 321|Caenorhabditis elegans Hypothetical protein T14B1.2 protein. Length = 321 Score = 28.3 bits (60), Expect = 6.5 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -3 Query: 433 WFTFLCRCLKCVWLN*SHIIY 371 W +C CL VWLN +IY Sbjct: 96 WTCQMCSCLNLVWLNVDKLIY 116 >Z46829-2|CAA86863.3| 321|Caenorhabditis elegans Hypothetical protein T14B1.2 protein. Length = 321 Score = 28.3 bits (60), Expect = 6.5 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -3 Query: 433 WFTFLCRCLKCVWLN*SHIIY 371 W +C CL VWLN +IY Sbjct: 96 WTCQMCSCLNLVWLNVDKLIY 116 >AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical protein Y54E2A.6 protein. Length = 1798 Score = 27.9 bits (59), Expect = 8.6 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +2 Query: 293 ITTPYSTSDNEIYSVTQTLKNEEILLINDVASVQPDTLEATT 418 + T STSDN + +V + L +E+ L++D +TL A T Sbjct: 207 VITRKSTSDNSLINVVRLLIIDEVHLLHDERGPVIETLVART 248 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,783,525 Number of Sequences: 27780 Number of extensions: 298585 Number of successful extensions: 679 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 647 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 679 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1872168044 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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