BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_I05
(742 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0001554856 Cluster: PREDICTED: similar to Tyrosine-p... 37 0.45
UniRef50_UPI0001509E77 Cluster: hypothetical protein TTHERM_0023... 36 0.79
UniRef50_Q4SLR2 Cluster: Chromosome 15 SCAF14556, whole genome s... 36 0.79
UniRef50_O77390 Cluster: Putative uncharacterized protein MAL3P6... 36 1.0
UniRef50_A5DT95 Cluster: Predicted protein; n=1; Lodderomyces el... 36 1.4
UniRef50_Q5U6G7 Cluster: Orf310 protein; n=2; Beta vulgaris subs... 34 3.2
UniRef50_Q22RS0 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_O51542 Cluster: Methyl-accepting chemotaxis protein; n=... 33 5.6
UniRef50_A0D5L2 Cluster: Chromosome undetermined scaffold_39, wh... 33 5.6
UniRef50_UPI0000E49761 Cluster: PREDICTED: similar to mKIAA0177 ... 33 7.4
UniRef50_Q0E530 Cluster: 38 kDa; n=1; Spodoptera frugiperda asco... 33 7.4
UniRef50_Q057F1 Cluster: Cytochrome o ubiquinol oxidase operon p... 33 7.4
UniRef50_A6W1X9 Cluster: Peptidase M16 domain protein precursor;... 33 7.4
UniRef50_Q7RSC6 Cluster: Putative uncharacterized protein PY0043... 33 7.4
UniRef50_UPI00015B5A88 Cluster: PREDICTED: similar to radial spo... 33 9.7
UniRef50_UPI000150A2E1 Cluster: TPR Domain containing protein; n... 33 9.7
UniRef50_Q3AI06 Cluster: Lipopolysaccharide biosynthesis protein... 33 9.7
UniRef50_Q39432 Cluster: DNA polymerase; n=5; Beta vulgaris subs... 33 9.7
UniRef50_Q237H1 Cluster: Neurohypophysial hormones, N-terminal D... 33 9.7
UniRef50_Q236Y7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_A0DTM4 Cluster: Chromosome undetermined scaffold_63, wh... 33 9.7
UniRef50_A0CVQ1 Cluster: Chromosome undetermined scaffold_29, wh... 33 9.7
UniRef50_A0C8E6 Cluster: Chromosome undetermined scaffold_158, w... 33 9.7
>UniRef50_UPI0001554856 Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 22
(Hematopoietic cell protein-tyrosine phosphatase
70Z-PEP) (Lymphoid phosphatase) (LyP); n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 22
(Hematopoietic cell protein-tyrosine phosphatase
70Z-PEP) (Lymphoid phosphatase) (LyP) - Ornithorhynchus
anatinus
Length = 800
Score = 37.1 bits (82), Expect = 0.45
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +1
Query: 403 VEMAENVEDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQ-- 576
V+ E E + ++EL + + L D + LA T I+NHP+ EQSP+ + +LQ
Sbjct: 365 VQTQEQYELVYNAVTELFLRQIQILTDSQDLASTET-IVNHPVVEQSPAPEADPYSLQLP 423
Query: 577 --ETHKRIIFQKRDSVEVEYIFTTEKKSS 657
K+++ Q+ SV E I T +S
Sbjct: 424 GSAVEKQVMCQQNQSVVEEDIEQTSSCTS 452
>UniRef50_UPI0001509E77 Cluster: hypothetical protein
TTHERM_00237530; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00237530 - Tetrahymena
thermophila SB210
Length = 919
Score = 36.3 bits (80), Expect = 0.79
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 15/86 (17%)
Frame = +1
Query: 496 AKHFTKIINHPITEQSPSI-QRYLKNLQETHKRIIF--QKRDSVEV--EYI-------FT 639
AK + +IN ++S S ++Y+KN++E KR+ F QKR+ EV +Y+ FT
Sbjct: 503 AKGGSSLINQENNKKSESYREQYIKNIEELQKRLDFLKQKRNEYEVRPDYLNASQSTRFT 562
Query: 640 TEKKSSLQRQRFN---SLPVSEVPEL 708
+ +++ + + FN S P+ +VP L
Sbjct: 563 SNVQNNYKDRNFNSSISSPIKQVPNL 588
>UniRef50_Q4SLR2 Cluster: Chromosome 15 SCAF14556, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 15
SCAF14556, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1375
Score = 36.3 bits (80), Expect = 0.79
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 469 RKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQETHKRI--IFQKRDSVEVEYIFTT 642
R+L D + ++F+ + + E I+ + +QETHKR+ + +RDS+ + T
Sbjct: 818 RELQDQLEAEQYFSTLYKTQVKELKEEIEEKNRQVQETHKRVQDLSSERDSLSAQLDLTV 877
Query: 643 EKKSSLQRQR 672
K S Q R
Sbjct: 878 TKAESEQLAR 887
>UniRef50_O77390 Cluster: Putative uncharacterized protein MAL3P6.5;
n=5; Plasmodium|Rep: Putative uncharacterized protein
MAL3P6.5 - Plasmodium falciparum (isolate 3D7)
Length = 461
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/69 (21%), Positives = 38/69 (55%)
Frame = +1
Query: 415 ENVEDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQETHKRI 594
+ V+DI +N+ +L + + R+++ + + KH IINH + I ++N + +H +
Sbjct: 387 QKVKDIYQNVDDLNIKTNREINQINNIIKHIQDIINH-YNKNILLITELIQNTKNSHSIL 445
Query: 595 IFQKRDSVE 621
+ ++++
Sbjct: 446 THKVLNNIQ 454
>UniRef50_A5DT95 Cluster: Predicted protein; n=1; Lodderomyces
elongisporus NRRL YB-4239|Rep: Predicted protein -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 161
Score = 35.5 bits (78), Expect = 1.4
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 49 ILSYHARTLKLHQQSTL-KCTKSRQTDLEMQLYFYFFLS*KSYCFFLFTESLTNLIFGSL 225
IL YH+ T LH + + TK + Q+ FYFF Y F+LF N F
Sbjct: 18 ILFYHSLTCTLHYTTHIYMYTKKTYPYTQRQILFYFFF----YFFYLFFPVFINFCFDCP 73
Query: 226 LNYF 237
+N+F
Sbjct: 74 VNFF 77
>UniRef50_Q5U6G7 Cluster: Orf310 protein; n=2; Beta vulgaris subsp.
vulgaris|Rep: Orf310 protein - Beta vulgaris subsp.
vulgaris
Length = 310
Score = 34.3 bits (75), Expect = 3.2
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = +2
Query: 137 NYIFIFFFLKNLIVFFYSRNH*QISFLGV--------YLIISKLFWTFWSLYGHSTSDSS 292
++I I FF L +FFY R FL + Y + S LF T ++L G + +S
Sbjct: 48 SFILILFFFICLCIFFYRRKGHFCLFLLIHFLLLLFSYFLRSFLFETLFTLVGGIVTATS 107
Query: 293 TLKHNTSGGA 322
+ HN S G+
Sbjct: 108 VIHHNVSSGS 117
>UniRef50_Q22RS0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1326
Score = 33.9 bits (74), Expect = 4.2
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 463 SFRKLDDVKKLAKHFTKIINHPI--TEQSPSIQRYLKNLQETHKRIIFQ-KRDSVEVEYI 633
SF+ + L T+ N I T Q SI+ + ++ K+ IFQ K + +E +YI
Sbjct: 542 SFQTQEQASHLQNTNTRQSNQKIIATPQINSIESQINQIKSEAKKSIFQTKHNKIEFDYI 601
Query: 634 FTTEKKSSLQ 663
EKK L+
Sbjct: 602 IEEEKKQGLE 611
>UniRef50_O51542 Cluster: Methyl-accepting chemotaxis protein; n=3;
Borrelia burgdorferi group|Rep: Methyl-accepting
chemotaxis protein - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 715
Score = 33.5 bits (73), Expect = 5.6
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 415 ENVEDITK--NISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQETHK 588
E ++ ITK N SELT +F ++ D L + INH + EQS Q LK L T +
Sbjct: 578 EIMDSITKTVNTSELTNKAFNQIFDSINLVVQVIEEINHTMQEQSIGSQEILKAL-NTMR 636
Query: 589 RIIFQ 603
I ++
Sbjct: 637 EITYE 641
>UniRef50_A0D5L2 Cluster: Chromosome undetermined scaffold_39, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_39,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1267
Score = 33.5 bits (73), Expect = 5.6
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +1
Query: 403 VEMAENVEDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPIT---EQSPSIQRYLKNL 573
+++ N ED+ ++ T+ + K +KK+ K + IN ++ I +LKN
Sbjct: 456 LDLESNQEDVFQDFRNYTIYTHHKDLPIKKILKIISLEINFIAIIYEDKFGKIYVHLKNN 515
Query: 574 QETHKRIIFQKRDSVEVEYIF 636
+ ++I K V+VE+I+
Sbjct: 516 EIEQNKLIMSKNSDVQVEFIY 536
>UniRef50_UPI0000E49761 Cluster: PREDICTED: similar to mKIAA0177
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to mKIAA0177 protein -
Strongylocentrotus purpuratus
Length = 585
Score = 33.1 bits (72), Expect = 7.4
Identities = 28/131 (21%), Positives = 56/131 (42%)
Frame = +1
Query: 235 FKIILDILEFVRALNIRQFHPQTQHKRRGRLNLGTTKKVAEFTAD*FYFDCNY*FRVEMA 414
+ I+ + FV A+ R+ Q + L T++V +F + Y D R++ A
Sbjct: 435 YSIVTQLTSFV-AIETREKGEDLQQGSVSLIKLAETEEV-DFLS---YMDWQKTVRLDTA 489
Query: 415 ENVEDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQETHKRI 594
++V+ I K L + + K +++ + ++ + S + Y+K HK +
Sbjct: 490 QDVDPIQKVQDLLDQANIESTFSILKAEEYYNQALSLAANQLPDSTELYIKTASALHKFL 549
Query: 595 IFQKRDSVEVE 627
KRD + E
Sbjct: 550 SDSKRDFDKAE 560
>UniRef50_Q0E530 Cluster: 38 kDa; n=1; Spodoptera frugiperda
ascovirus 1a|Rep: 38 kDa - Spodoptera frugiperda
ascovirus 1a
Length = 315
Score = 33.1 bits (72), Expect = 7.4
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 469 RKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQETHKRIIFQKRDSVEVEYIF 636
RK +K +H+ KI N +PS Y K +Q+ ++ ++K D ++++
Sbjct: 9 RKSRKFEKRLRHYVKICNDHSWLPNPSTDTYYKMIQQAEHQVYYRKLDMYTCDFLY 64
>UniRef50_Q057F1 Cluster: Cytochrome o ubiquinol oxidase operon
protein; n=1; Buchnera aphidicola str. Cc (Cinara
cedri)|Rep: Cytochrome o ubiquinol oxidase operon
protein - Buchnera aphidicola subsp. Cinara cedri
Length = 107
Score = 33.1 bits (72), Expect = 7.4
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 139 LYFYFFLS*KSYCFFLFTESL-TNLIFGSLLNYFKIILDI 255
++FYFFL K Y FF + L NLI LL YFK +I
Sbjct: 32 VFFYFFLLYKDYYFFQKNKYLFYNLIIIQLLLYFKYFFEI 71
>UniRef50_A6W1X9 Cluster: Peptidase M16 domain protein precursor;
n=1; Marinomonas sp. MWYL1|Rep: Peptidase M16 domain
protein precursor - Marinomonas sp. MWYL1
Length = 940
Score = 33.1 bits (72), Expect = 7.4
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Frame = +1
Query: 427 DITKNISELTVLSFRKLDDVKK----LAKHFTKIINHPITEQSPSIQRYLKNLQE----- 579
D+T N+S LT LS KL+ ++ L H+ + P + + YL N+
Sbjct: 685 DMTLNLSHLTPLSLEKLEQTRQQQVVLPAHYFMVSRLPEEDVTRLAALYLANIPRDPLAS 744
Query: 580 -THKRIIFQKRDSVEVEYIFTTEKKSSLQRQRFNSLPVSEVPEL 708
+ + Q+ V+ TE K+ + + SLP S + L
Sbjct: 745 IDNTTAVMQQAGEAIVDVSLNTEPKAEYRLYAYQSLPWSPIAAL 788
>UniRef50_Q7RSC6 Cluster: Putative uncharacterized protein PY00434;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00434 - Plasmodium yoelii yoelii
Length = 463
Score = 33.1 bits (72), Expect = 7.4
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 424 EDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQETHKRIIFQ 603
E+I K +SEL L +R ++ KKL + K + T+Q S + LK E +++ + Q
Sbjct: 238 EEIRKKLSELAKLRWRNEEERKKLLRCKNKFKHSEKTKQLLSYKIKLKWKDENYRKSVIQ 297
Query: 604 K 606
K
Sbjct: 298 K 298
>UniRef50_UPI00015B5A88 Cluster: PREDICTED: similar to radial
spokehead; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to radial spokehead - Nasonia vitripennis
Length = 613
Score = 32.7 bits (71), Expect = 9.7
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +1
Query: 424 EDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQETHKRIIFQ 603
E + N+S +++ KL+DV+ K + N+ I E + S + LQE ++ + +
Sbjct: 153 EVVLLNLSIRKLMAKEKLEDVRFWGKILGRPKNYYIAEATLSEDEIERKLQELEEKDL-K 211
Query: 604 KRDSVEVEYIFTTEKKSSLQRQRFNSLPVSEVPEL-LKNEFIXVEN 738
++ V ++ + +++ S +EVPEL +N+ +EN
Sbjct: 212 SEETKNVHAEEEANEQENAEKEALESALATEVPELTAENKAGSIEN 257
>UniRef50_UPI000150A2E1 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 2629
Score = 32.7 bits (71), Expect = 9.7
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 412 AENVEDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQE-THK 588
AE ED+ +NI ++ + F+++D +K+ + ++IN+ I+ S S +++NL +
Sbjct: 2031 AEKQEDMEQNIGQIDPM-FKEMDIIKETFEQLEQVINYAIS-SSHSHSSFIQNLLHFANA 2088
Query: 589 RIIFQKRDSV 618
+ FQK ++
Sbjct: 2089 KSTFQKISNI 2098
>UniRef50_Q3AI06 Cluster: Lipopolysaccharide biosynthesis
protein-like; n=3; Synechococcus|Rep: Lipopolysaccharide
biosynthesis protein-like - Synechococcus sp. (strain
CC9605)
Length = 1162
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 520 NHPITEQSPSIQRYLKNLQ--ETHKRIIFQKRDSVEVEYIFTTEK-KSSLQRQRFNSL 684
N+ + +P +Q Y+KNLQ + +K+II R+ Y+F E+ ++ L+R+ L
Sbjct: 56 NNRRKKTTPELQDYIKNLQSKDINKKIIRDFRELAHYAYVFDIEQYRAQLEREEAEGL 113
>UniRef50_Q39432 Cluster: DNA polymerase; n=5; Beta vulgaris subsp.
vulgaris|Rep: DNA polymerase - Beta vulgaris subsp.
vulgaris
Length = 774
Score = 32.7 bits (71), Expect = 9.7
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Frame = +1
Query: 415 ENVEDITKNISELTVLSFRKLDDVKKLAKHFTKIINH---PITEQSPSIQRYLKNLQETH 585
E V + NI +L+V RK LA + +++ H +P + L++L
Sbjct: 645 EFVSNFRVNIKKLSVYK-RKGKVTVALALNNKRMLLHIGGKWVGSTPKVVFDLESLDNAS 703
Query: 586 KRIIF---QKRDSVEVEYIFTTEKKSSLQRQRFNSLPVSEVPELLKNE 720
K I + QK S E+E ++ EK++S++ +R L +E +L +E
Sbjct: 704 KEIFYSMKQKLSSQEIENLYLREKRASMEDKRSQDLVQTEERTMLDSE 751
>UniRef50_Q237H1 Cluster: Neurohypophysial hormones, N-terminal Domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Neurohypophysial hormones, N-terminal Domain
containing protein - Tetrahymena thermophila SB210
Length = 2706
Score = 32.7 bits (71), Expect = 9.7
Identities = 24/113 (21%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = +1
Query: 403 VEMAENVEDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQET 582
++ A++ KN+ + + + L DV+ + KII+ I + PS + ++
Sbjct: 2547 IDTAKSAIRFIKNLKKSSKIVPTNLGDVEAKKQVSNKIISAQIIDNKPSSILTFEGAPQS 2606
Query: 583 HKRIIFQKRDSVEVEYIFTTEKKSSLQRQRFNSLPVSE-VPELLKNEFIXVEN 738
++ + Q VE + EKK ++R R + +P+ + FI ++N
Sbjct: 2607 VEKALNQNEQKVEEDQFNDIEKKRGMRRPRTKFFKRNPFLPKDQQQSFINLDN 2659
>UniRef50_Q236Y7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 605
Score = 32.7 bits (71), Expect = 9.7
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Frame = +1
Query: 424 EDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQ---SPSIQRYLKNLQETHKRI 594
E++TK + L L D +KL +FT N + + S L N + I
Sbjct: 308 ENLTKLLVNLQKSCEDLLQDKEKLVANFTINCNESFSVHPTLNNSAVAALNNHSALQENI 367
Query: 595 IFQKRDSVEVEYIFTTEKKSSLQRQ--RFNSLPVSEVPELLKNEFI 726
+ K + +Y+ KK LQ FN++PV E LL+ F+
Sbjct: 368 VHHKNTIYDPDYV---NKKGGLQGSGDSFNNIPVDEPQSLLQTSFM 410
>UniRef50_A0DTM4 Cluster: Chromosome undetermined scaffold_63, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_63,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 220
Score = 32.7 bits (71), Expect = 9.7
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 544 PSIQRYLKNLQETHKRIIFQKRDSVEVEYIFTTEKKSSLQRQRFNSLPVSEVPELLKNEF 723
PS+ +YL+ ++ K I QK Y + K + QRQ +S P E P+L N F
Sbjct: 25 PSVAQYLQKVRTPEKNIPKQKESP---SYRIKSNPKINQQRQASSSSPSREKPQLKYNSF 81
>UniRef50_A0CVQ1 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_29, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1284
Score = 32.7 bits (71), Expect = 9.7
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = +1
Query: 397 FRVEMAENVEDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQ 576
F E+ ++ ++KNI +L + R + VK +H+ IIN I Q L
Sbjct: 1176 FNCEVYNGLQGMSKNIKQLEQIR-RLTNSVKLTTQHYQSIINDQIDLQEAKDDNNHILLL 1234
Query: 577 ETHKRIIFQKRDSVEVEYIFT 639
+ K++I ++ + + + +FT
Sbjct: 1235 DLLKQLIHKQEQAFQFQQLFT 1255
>UniRef50_A0C8E6 Cluster: Chromosome undetermined scaffold_158,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_158,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1067
Score = 32.7 bits (71), Expect = 9.7
Identities = 20/79 (25%), Positives = 42/79 (53%)
Frame = +1
Query: 433 TKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQETHKRIIFQKRD 612
+ N+ L + S + D+K K+F KI N+ + E P+ + + +Q + + Q R
Sbjct: 258 SSNLMSLVIESSLPISDLKTYIKNFEKIKNNNLVE--PTCEDFGSPIQ--YGTQLIQYRS 313
Query: 613 SVEVEYIFTTEKKSSLQRQ 669
+ +V+ ++ T + S +Q+Q
Sbjct: 314 NSDVKKVYITHQLSDVQQQ 332
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,980,992
Number of Sequences: 1657284
Number of extensions: 11387340
Number of successful extensions: 37683
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 35984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37626
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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