Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_I05
(742 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin h... 32 0.94
AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington d... 32 0.94
AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington d... 32 0.94
AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA... 32 0.94
AE014297-4720|AAF57130.2| 357|Drosophila melanogaster CG15561-P... 31 2.2
BT016038-1|AAV36923.1| 855|Drosophila melanogaster RE01051p pro... 30 2.9
AE014297-3108|AAF55959.3| 1364|Drosophila melanogaster CG5732-PA... 30 2.9
AE013599-1349|AAF58616.2| 855|Drosophila melanogaster CG8271-PA... 30 2.9
X67219-1|CAA47659.1| 597|Drosophila melanogaster Rop protein. 30 3.8
X67218-1|CAA47658.1| 597|Drosophila melanogaster Rop protein. 30 3.8
U15967-2|AAB60242.1| 597|Drosophila melanogaster Rop protein. 30 3.8
AY052094-1|AAK93518.1| 597|Drosophila melanogaster SD04216p pro... 30 3.8
AE014296-773|AAF47844.1| 597|Drosophila melanogaster CG15811-PA... 30 3.8
BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p pro... 29 6.6
AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC... 29 6.6
AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA... 29 6.6
>AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin
homolog protein.
Length = 3584
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 311 SGGAD*ILALPRKSQNSQQISFILTATINFALKWPRTLR 427
+G A ILA+P + ++ Q +L AT+N L+ PR R
Sbjct: 2689 AGAAKQILAMPTRQESEQDALGVLLATVNTLLQQPRVWR 2727
>AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 311 SGGAD*ILALPRKSQNSQQISFILTATINFALKWPRTLR 427
+G A ILA+P + ++ Q +L AT+N L+ PR R
Sbjct: 2688 AGAAKQILAMPTRQESEQDALGVLLATVNTLLQQPRVWR 2726
>AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 311 SGGAD*ILALPRKSQNSQQISFILTATINFALKWPRTLR 427
+G A ILA+P + ++ Q +L AT+N L+ PR R
Sbjct: 2688 AGAAKQILAMPTRQESEQDALGVLLATVNTLLQQPRVWR 2726
>AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA
protein.
Length = 3583
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 311 SGGAD*ILALPRKSQNSQQISFILTATINFALKWPRTLR 427
+G A ILA+P + ++ Q +L AT+N L+ PR R
Sbjct: 2688 AGAAKQILAMPTRQESEQDALGVLLATVNTLLQQPRVWR 2726
>AE014297-4720|AAF57130.2| 357|Drosophila melanogaster CG15561-PA
protein.
Length = 357
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 535 EQSPSIQRYLKNLQETHKRIIFQKRDSVEVEYIFTTEKKSSLQRQRFNSLPVSEVPELLK 714
E +QR LK ET R + DSVE +KK S+ + + VS++ E +K
Sbjct: 185 EMLEKLQRKLKTTPETEHRAVESVDDSVEQCDTKAKKKKKSIAEEFSEACEVSQLEEPIK 244
Query: 715 NE 720
++
Sbjct: 245 SK 246
>BT016038-1|AAV36923.1| 855|Drosophila melanogaster RE01051p
protein.
Length = 855
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 366 CCEFCD-FLGSAKIQSAPPLVLCLRVELSDVECPYKL 259
CCE + +L + +Q +++CL V L V CPY L
Sbjct: 640 CCERIEMYLDISLLQDPSFILMCLSVTLMSVGCPYML 676
>AE014297-3108|AAF55959.3| 1364|Drosophila melanogaster CG5732-PA
protein.
Length = 1364
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 427 DITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQETHKRII 597
D + I + V S+R+LD + L+ F I Q PS+ ++ + H R++
Sbjct: 1233 DTFERIKTIFVASYRRLDSTRNLSAIFEDYDGPTILMQQPSVDSEIELYEGQHHRLL 1289
>AE013599-1349|AAF58616.2| 855|Drosophila melanogaster CG8271-PA
protein.
Length = 855
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 366 CCEFCD-FLGSAKIQSAPPLVLCLRVELSDVECPYKL 259
CCE + +L + +Q +++CL V L V CPY L
Sbjct: 640 CCERIEMYLDISLLQDPSFILMCLSVTLMSVGCPYML 676
>X67219-1|CAA47659.1| 597|Drosophila melanogaster Rop protein.
Length = 597
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/40 (27%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -2
Query: 342 GSAKIQSAPPLVLCL--RVELSDVECPYKLQNVQNNFEII 229
G A++++ P L++ + V +S++ C Y++ N N+E++
Sbjct: 535 GQAQVKNVPRLIVFIVGGVSMSEMRCAYEVTNAVRNWEVL 574
>X67218-1|CAA47658.1| 597|Drosophila melanogaster Rop protein.
Length = 597
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/40 (27%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -2
Query: 342 GSAKIQSAPPLVLCL--RVELSDVECPYKLQNVQNNFEII 229
G A++++ P L++ + V +S++ C Y++ N N+E++
Sbjct: 535 GQAQVKNVPRLIVFIVGGVSMSEMRCAYEVTNAVRNWEVL 574
>U15967-2|AAB60242.1| 597|Drosophila melanogaster Rop protein.
Length = 597
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/40 (27%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -2
Query: 342 GSAKIQSAPPLVLCL--RVELSDVECPYKLQNVQNNFEII 229
G A++++ P L++ + V +S++ C Y++ N N+E++
Sbjct: 535 GQAQVKNVPRLIVFIVGGVSMSEMRCAYEVTNAVRNWEVL 574
>AY052094-1|AAK93518.1| 597|Drosophila melanogaster SD04216p
protein.
Length = 597
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/40 (27%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -2
Query: 342 GSAKIQSAPPLVLCL--RVELSDVECPYKLQNVQNNFEII 229
G A++++ P L++ + V +S++ C Y++ N N+E++
Sbjct: 535 GQAQVKNVPRLIVFIVGGVSMSEMRCAYEVTNAVRNWEVL 574
>AE014296-773|AAF47844.1| 597|Drosophila melanogaster CG15811-PA
protein.
Length = 597
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/40 (27%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -2
Query: 342 GSAKIQSAPPLVLCL--RVELSDVECPYKLQNVQNNFEII 229
G A++++ P L++ + V +S++ C Y++ N N+E++
Sbjct: 535 GQAQVKNVPRLIVFIVGGVSMSEMRCAYEVTNAVRNWEVL 574
>BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p protein.
Length = 1664
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +1
Query: 487 KKLAKHFTKIINHPITEQSPSIQRYLKNLQETHKRIIFQKRDSVEVEYIFTTEKKSSLQ 663
++L +H+ + IN I K L++ HKR+I + R +E + E+ Q
Sbjct: 1339 ERLKQHYDRQINDLHRTSELMISEMRKTLEQEHKRVISELRQQNAIELMRAVEEAKRKQ 1397
>AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC,
isoform C protein.
Length = 1664
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +1
Query: 487 KKLAKHFTKIINHPITEQSPSIQRYLKNLQETHKRIIFQKRDSVEVEYIFTTEKKSSLQ 663
++L +H+ + IN I K L++ HKR+I + R +E + E+ Q
Sbjct: 1339 ERLKQHYDRQINDLHRTSELMISEMRKTLEQEHKRVISELRQQNAIELMRAVEEAKRKQ 1397
>AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA,
isoform A protein.
Length = 1674
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +1
Query: 487 KKLAKHFTKIINHPITEQSPSIQRYLKNLQETHKRIIFQKRDSVEVEYIFTTEKKSSLQ 663
++L +H+ + IN I K L++ HKR+I + R +E + E+ Q
Sbjct: 1349 ERLKQHYDRQINDLHRTSELMISEMRKTLEQEHKRVISELRQQNAIELMRAVEEAKRKQ 1407
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,697,821
Number of Sequences: 53049
Number of extensions: 540291
Number of successful extensions: 1875
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1875
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -