Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_I04
         (452 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical ...    56   2e-08
L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    46   1e-05
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    46   1e-05
AL023835-14|CAA19489.2|  192|Caenorhabditis elegans Hypothetical...    27   6.4  

>AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical
           protein F32D1.2 protein.
          Length = 54

 Score = 55.6 bits (128), Expect = 2e-08
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = +1

Query: 103 MXAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPWANGR 255
           M AWR AGL Y+ YS IAA++ R+  KQ     A+K+ E+ +++T W NG+
Sbjct: 1   MVAWRAAGLNYVRYSQIAAEITRKCTKQVGGKAAVKKPEATLKITTWENGK 51


>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 46.0 bits (104), Expect = 1e-05
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = +1

Query: 103 MXAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPWANGR 255
           M AWR AGL Y+ YS IAA+V+R+  K       +K+ ++ ++ T W NG+
Sbjct: 1   MVAWRAAGLNYVRYSQIAAQVVRQCTK---GGANVKKPQATLKTTAWENGK 48


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 46.0 bits (104), Expect = 1e-05
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = +1

Query: 103 MXAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPWANGR 255
           M AWR AGL Y+ YS IAA+V+R+  K       +K+ ++ ++ T W NG+
Sbjct: 1   MVAWRAAGLNYVRYSQIAAQVVRQCTK---GGANVKKPQATLKTTAWENGK 48


>AL023835-14|CAA19489.2|  192|Caenorhabditis elegans Hypothetical
           protein Y37A1B.4 protein.
          Length = 192

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 218 NLTSESHLGPTDDLHTSRKLFQSEEGIV 301
           N+  + H G +D +H  RKL    EG++
Sbjct: 162 NILPQKHQGASDVVHGRRKLMDDLEGVI 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,455,003
Number of Sequences: 27780
Number of extensions: 129807
Number of successful extensions: 281
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)