Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_I01
         (375 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VV12 Cluster: CG13066-PA; n=1; Drosophila melanogaste...    38   0.045
UniRef50_Q9VV08 Cluster: CG13069-PA; n=1; Drosophila melanogaste...    38   0.060
UniRef50_Q8IQU6 Cluster: CG32213-PA; n=4; Drosophila melanogaste...    36   0.32 
UniRef50_A7NDC7 Cluster: Major facilitator superfamily; n=10; Fr...    33   1.3  
UniRef50_Q7SGA1 Cluster: Putative uncharacterized protein NCU027...    33   1.7  
UniRef50_Q4DN11 Cluster: Putative uncharacterized protein; n=3; ...    33   2.3  
UniRef50_Q45V96 Cluster: Tentative cuticle protein; n=1; Myzus p...    33   2.3  
UniRef50_Q05TJ1 Cluster: Putative uncharacterized protein; n=1; ...    32   3.0  
UniRef50_A4BQN8 Cluster: DNA polymerase III subunit delta; n=3; ...    32   3.0  
UniRef50_A5E499 Cluster: Putative uncharacterized protein; n=1; ...    32   3.9  
UniRef50_Q8G4X8 Cluster: Putative uncharacterized protein; n=3; ...    31   5.2  
UniRef50_Q9VV13 Cluster: CG13065-PA; n=1; Drosophila melanogaste...    31   9.1  
UniRef50_Q7RNR1 Cluster: CCAAT-box DNA binding protein subunit B...    31   9.1  
UniRef50_Q23KG6 Cluster: Putative uncharacterized protein; n=1; ...    31   9.1  
UniRef50_Q1HCN2 Cluster: Snail-like zinc-finger protein; n=1; Ca...    31   9.1  
UniRef50_O45461 Cluster: Putative uncharacterized protein srh-13...    31   9.1  
UniRef50_A7T2Y5 Cluster: Predicted protein; n=1; Nematostella ve...    31   9.1  

>UniRef50_Q9VV12 Cluster: CG13066-PA; n=1; Drosophila
           melanogaster|Rep: CG13066-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 95

 Score = 38.3 bits (85), Expect = 0.045
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
 Frame = +3

Query: 60  FLITMLALFACAAADPYVVPLPYAATAGY--PLSYVS-SLSVPTVYSSAFTGFY-PQIA- 224
           F + + ALFA AAA+P +  L Y A   Y  PL+Y S   + P  Y++A+T  Y P +A 
Sbjct: 7   FAVVLCALFAAAAANPGL--LAYNAPLAYSTPLAYSSLPAAAPLAYTAAYTPAYAPYVAP 64

Query: 225 YANDY 239
           YA+ Y
Sbjct: 65  YASSY 69


>UniRef50_Q9VV08 Cluster: CG13069-PA; n=1; Drosophila
           melanogaster|Rep: CG13069-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 97

 Score = 37.9 bits (84), Expect = 0.060
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +3

Query: 48  MFKAFLITMLALFACAAADPYVV-PLPYAATAGYPLSYVSSLSVPTVYSSAFTGFYPQIA 224
           MFK F + + AL AC AA P +V PL Y+A    PL  V++     VYS  + G +    
Sbjct: 1   MFKFFAVALFALIACVAAKPGIVAPLAYSA----PL--VAAAPAAAVYSREYHGNFAAPY 54

Query: 225 YANDYI 242
            A+ Y+
Sbjct: 55  VASPYV 60


>UniRef50_Q8IQU6 Cluster: CG32213-PA; n=4; Drosophila
           melanogaster|Rep: CG32213-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 154

 Score = 35.5 bits (78), Expect = 0.32
 Identities = 23/62 (37%), Positives = 33/62 (53%)
 Frame = +3

Query: 48  MFKAFLITMLALFACAAADPYVVPLPYAATAGYPLSYVSSLSVPTVYSSAFTGFYPQIAY 227
           MFK + + +LAL ACAAA P ++  P A TA  PL+Y +  +V    +   T    Q+  
Sbjct: 26  MFK-YAVVVLALVACAAAKPGLLGAPLAYTA--PLAYSAPAAVVAAPAPVVTATSSQVIA 82

Query: 228 AN 233
            N
Sbjct: 83  RN 84


>UniRef50_A7NDC7 Cluster: Major facilitator superfamily; n=10;
           Francisella tularensis|Rep: Major facilitator
           superfamily - Francisella tularensis subsp. holarctica
           FTA
          Length = 418

 Score = 33.5 bits (73), Expect = 1.3
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
 Frame = +3

Query: 63  LITMLALFACAAADPYVVPLPYAATAGYPLSYVS--SLSVPTVYSSAFTGFYPQIAYAND 236
           L+  +AL A A    Y+V L Y +     L Y    SL+V TV+S  F+   P     +D
Sbjct: 234 LLLAIALSAYANIMYYLV-LSYLSNHFVELHYSEFFSLAVVTVFSLIFSFSAPLWGLLSD 292

Query: 237 YIFRK*NVKVNTYIWNFFCY 296
           Y+ RK  +K + +I+  F Y
Sbjct: 293 YLGRKPLIKFSIWIYLIFAY 312


>UniRef50_Q7SGA1 Cluster: Putative uncharacterized protein
           NCU02749.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU02749.1 - Neurospora crassa
          Length = 526

 Score = 33.1 bits (72), Expect = 1.7
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +1

Query: 139 PATPFPTFHPYQYLPSTALRSPASTHKSHTQMIISFVNKMLK*IHTSGTSSVTINKIYCC 318
           P  PFP   P+   PS +   P STH        ++VN  L   +T+G  +V  +K + C
Sbjct: 158 PPRPFPP--PFLSPPSGSFSDPLSTHDRSRDRRAAYVNGKLIRGYTNGDDAVFASKYFVC 215


>UniRef50_Q4DN11 Cluster: Putative uncharacterized protein; n=3;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 1690

 Score = 32.7 bits (71), Expect = 2.3
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +3

Query: 60  FLITMLALFACAAADPYVVPLPYAATAGYPLSYVSSLSVPTVYS-SAFTGFYPQIA 224
           FL+ + A+         VVPLP A     P   VS   +P + S +AF  FY  +A
Sbjct: 558 FLVDLAAIIGYRETGEMVVPLPSALPPHLPPPEVSEFGMPEIASAAAFASFYRTLA 613


>UniRef50_Q45V96 Cluster: Tentative cuticle protein; n=1; Myzus
           persicae|Rep: Tentative cuticle protein - Myzus persicae
           (Peach-potato aphid)
          Length = 118

 Score = 32.7 bits (71), Expect = 2.3
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 84  FACAAADPYVVPL-PYAATAGYPLSYVSSLSVPTVYSSAFTGFYPQIAYAND 236
           +  A A  Y  P+ PYA +A YP SY    + PT Y++     YP  AYA+D
Sbjct: 44  YIAAPALAYSAPVYPYAYSA-YPYSYSYPAAYPTAYAA-----YPSYAYAHD 89


>UniRef50_Q05TJ1 Cluster: Putative uncharacterized protein; n=1;
           Synechococcus sp. RS9916|Rep: Putative uncharacterized
           protein - Synechococcus sp. RS9916
          Length = 75

 Score = 32.3 bits (70), Expect = 3.0
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +1

Query: 127 TLQLPATPFPTFHPYQYLPSTALRSPASTHKSHTQMI 237
           TLQ P+TP P   P Q+ PS+A R   +    HT MI
Sbjct: 19  TLQ-PSTPIPAIAPMQWQPSSADRFNGAHQHGHTGMI 54


>UniRef50_A4BQN8 Cluster: DNA polymerase III subunit delta; n=3;
           Ectothiorhodospiraceae|Rep: DNA polymerase III subunit
           delta - Nitrococcus mobilis Nb-231
          Length = 340

 Score = 32.3 bits (70), Expect = 3.0
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +2

Query: 83  LRLRGGRPVCG-ASAVRCNCRLPPFLRFILISTYRL 187
           LRL GG+P  G A A++  CR PP    +L+++ RL
Sbjct: 83  LRLPGGKPGAGGAQALQAYCRAPPADTLLLVASARL 118


>UniRef50_A5E499 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 157

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 103 TRMWCLCRTLQLPATPFPTFHPYQYLP 183
           T   CL R L L ++P P FHP+  LP
Sbjct: 49  TNRHCLFRALSLSSSPQPPFHPHTLLP 75


>UniRef50_Q8G4X8 Cluster: Putative uncharacterized protein; n=3;
           Bifidobacterium longum|Rep: Putative uncharacterized
           protein - Bifidobacterium longum
          Length = 423

 Score = 31.5 bits (68), Expect = 5.2
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +3

Query: 66  ITMLALFACAAADPYVVPLPYAATAGYPLSYVSSLSVPTVYSSAFTGFYP 215
           +T  A  A A A P   P P A  + YP +  +  SVP VY S     YP
Sbjct: 101 VTPAAAPAPAPAAPAPAPAPAAPNSPYPGAAPAGGSVPPVYGSVSAPVYP 150


>UniRef50_Q9VV13 Cluster: CG13065-PA; n=1; Drosophila
           melanogaster|Rep: CG13065-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 140

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
 Frame = +3

Query: 48  MFKAFLITMLALFACAAADPYVVPLPYAA---TAGYP-LSYVSSLSVPTVYSSAFTGFYP 215
           MFK F+  +  L + AAA  Y+  L   A   TA  P +SY  +L+ P++   A  G  P
Sbjct: 1   MFKYFVFAVFCLASAAAAPGYLGGLAAPALPLTAAAPAISYGHALAAPSI---ASYGLAP 57

Query: 216 QIAYA 230
           +++YA
Sbjct: 58  RLSYA 62


>UniRef50_Q7RNR1 Cluster: CCAAT-box DNA binding protein subunit B;
           n=8; Plasmodium (Vinckeia)|Rep: CCAAT-box DNA binding
           protein subunit B - Plasmodium yoelii yoelii
          Length = 1047

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = +3

Query: 120 LPYAAT-AGYPLSYVSSLSVPTVYSSAFTG-FYPQIAYANDYIFR--K*NVKVNTYIWNF 287
           LP + T   Y +  V + ++PT+     +  F     Y  +Y ++  K N  +N Y  N 
Sbjct: 689 LPNSNTDQNYDIPKVDNNNMPTISDDNISNNFKENYEYLKNYFYKLNKTNTSINDYFLNL 748

Query: 288 FCY 296
           FCY
Sbjct: 749 FCY 751


>UniRef50_Q23KG6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 871

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 177 PTV-YSSAFTGFYPQIAYANDYIFRK*NVKVNTYIWNFFCYDK 302
           PT+ +S+   GFY    Y+N+++       +NT +WN+  Y K
Sbjct: 227 PTIIFSNPNAGFYEFSKYSNEWVDFYFKKGINTLVWNYRGYGK 269


>UniRef50_Q1HCN2 Cluster: Snail-like zinc-finger protein; n=1;
           Callinectes sapidus|Rep: Snail-like zinc-finger protein
           - Callinectes sapidus (Blue crab)
          Length = 237

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +1

Query: 133 QLPATPFPTFHPYQYLPSTALRSPASTHKSHT 228
           Q+PA+P P FH Y    S+AL SP ST  S T
Sbjct: 53  QVPASPVPQFHFYP--DSSALISPVSTCSSAT 82


>UniRef50_O45461 Cluster: Putative uncharacterized protein srh-136;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein srh-136 - Caenorhabditis elegans
          Length = 330

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 105 PYVVPLPYAATAGYPLSYVSSLSVPTV 185
           P+V+   YAA AGYPL  +  L VPT+
Sbjct: 72  PFVI---YAAVAGYPLGVIVYLGVPTI 95


>UniRef50_A7T2Y5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 58

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +3

Query: 111 VVPLPYAATAGYPLSYVSSLSVPTVYSSAFT---GFYPQIAYANDY 239
           V PL Y+A   YPL Y + +  P  YS       G+ P+I Y   Y
Sbjct: 1   VYPLGYSACIVYPLGYSACIVYPLGYSPRIVYPLGYSPRIVYPLGY 46


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,376,426
Number of Sequences: 1657284
Number of extensions: 6297662
Number of successful extensions: 19088
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19071
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)