Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_I01
         (375 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86974-1|BAA13210.2|  884|Homo sapiens KIAA0220 protein.               29   6.5  
BC006107-1|AAH06107.1|  750|Homo sapiens ARHGAP9 protein protein.      28   8.6  
AK131415-1|BAD18562.1|  803|Homo sapiens protein ( Homo sapiens ...    28   8.6  
AK092763-1|BAC03969.1|  640|Homo sapiens BL27 mRNA.  protein.          28   8.6  
AB051853-1|BAB56159.1|  731|Homo sapiens rho-GTPase activating p...    28   8.6  

>D86974-1|BAA13210.2|  884|Homo sapiens KIAA0220 protein.
          Length = 884

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +1

Query: 79  LSSPARRPTRMWCLCRTLQLPATPF-PTFHPYQYLPSTALRSPASTHKSHTQMIIS 243
           + +PA  P RM        + + PF P  HP Q + S  L S       H  MIIS
Sbjct: 406 IKTPAFHPQRMIISRHLPSVSSLPFHPQLHPQQMIISRYLLSVCGFRFHHQPMIIS 461


>BC006107-1|AAH06107.1|  750|Homo sapiens ARHGAP9 protein protein.
          Length = 750

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 94  RRPTRMWCLCRTLQLPATPFPTFHPYQYLPSTALRSPAST 213
           R+    W L R L+ P+T  P F P  Y+   ++ S + T
Sbjct: 55  RKTNSDWWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPT 94


>AK131415-1|BAD18562.1|  803|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16525 fis, clone OCBBF2005433, weakly  similar
           to N-CHIMAERIN. ).
          Length = 803

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 94  RRPTRMWCLCRTLQLPATPFPTFHPYQYLPSTALRSPAST 213
           R+    W L R L+ P+T  P F P  Y+   ++ S + T
Sbjct: 134 RKTNSDWWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPT 173


>AK092763-1|BAC03969.1|  640|Homo sapiens BL27 mRNA.  protein.
          Length = 640

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 94  RRPTRMWCLCRTLQLPATPFPTFHPYQYLPSTALRSPAST 213
           R+    W L R L+ P+T  P F P  Y+   ++ S + T
Sbjct: 55  RKTNSDWWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPT 94


>AB051853-1|BAB56159.1|  731|Homo sapiens rho-GTPase activating
           protein protein.
          Length = 731

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 94  RRPTRMWCLCRTLQLPATPFPTFHPYQYLPSTALRSPAST 213
           R+    W L R L+ P+T  P F P  Y+   ++ S + T
Sbjct: 55  RKTNSDWWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPT 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,475,686
Number of Sequences: 237096
Number of extensions: 1006660
Number of successful extensions: 2696
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2694
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)