Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_H23
(617 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024989-1|ABE01219.1| 323|Drosophila melanogaster IP10750p pro... 98 1e-20
AE013599-1346|AAF58620.1| 323|Drosophila melanogaster CG13192-P... 98 1e-20
BT011170-1|AAR84385.1| 897|Drosophila melanogaster AT01547p pro... 32 0.71
AE014296-1292|AAF50537.1| 1132|Drosophila melanogaster CG14838-P... 32 0.71
AY118386-1|AAM48415.1| 361|Drosophila melanogaster RE31658p pro... 31 1.2
AL138972-9|CAB72292.1| 361|Drosophila melanogaster EG:BACR25B3.... 31 1.2
AF233288-1|AAF43418.1| 361|Drosophila melanogaster WDS protein. 31 1.2
AE014298-414|AAF45791.1| 361|Drosophila melanogaster CG17437-PA... 31 1.2
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 28 8.8
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 28 8.8
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 28 8.8
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 28 8.8
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 28 8.8
>BT024989-1|ABE01219.1| 323|Drosophila melanogaster IP10750p
protein.
Length = 323
Score = 97.9 bits (233), Expect = 1e-20
Identities = 62/168 (36%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Frame = +3
Query: 111 MALLPPDPVYTIRNVDNVPVYSLAFSFLPGGLERLLAGSKNGYVYAYNLQTNRVQQKIQV 290
MA+LPPDPV+++R+ D V SL F +RLLAG+ G V+ ++LQTNR +V
Sbjct: 1 MAVLPPDPVFSLRSPDMGAVNSLCFQ----ESDRLLAGTIKGSVFLWDLQTNRSALHFEV 56
Query: 291 GQAPILHLIHTDSHLITQEKGGKLKVFELTNSGYEEDAVIEVDYPGFCRFEANTKLAS-- 464
G PI L HT L+TQEKGG + +F + S Y ++ I ++ GFCR +T +
Sbjct: 57 GSDPITSLHHTPDRLVTQEKGGTITMFSIGGSSYVKERSIPGNHLGFCRSALHTNTSKTN 116
Query: 465 ---LYVPEKDYKINIYNFNGEKLGS--LXYDDASV-KLGDVMCLKFIE 590
L+ P ++ I + + + L DD + KLG V C K E
Sbjct: 117 EQLLFYPCEESSIGVLHVTDAAAPTQILVPDDPQLPKLGSVTCFKPFE 164
>AE013599-1346|AAF58620.1| 323|Drosophila melanogaster CG13192-PA
protein.
Length = 323
Score = 97.9 bits (233), Expect = 1e-20
Identities = 62/168 (36%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Frame = +3
Query: 111 MALLPPDPVYTIRNVDNVPVYSLAFSFLPGGLERLLAGSKNGYVYAYNLQTNRVQQKIQV 290
MA+LPPDPV+++R+ D V SL F +RLLAG+ G V+ ++LQTNR +V
Sbjct: 1 MAVLPPDPVFSLRSPDMGAVNSLCFQ----ESDRLLAGTIKGSVFLWDLQTNRSALHFEV 56
Query: 291 GQAPILHLIHTDSHLITQEKGGKLKVFELTNSGYEEDAVIEVDYPGFCRFEANTKLAS-- 464
G PI L HT L+TQEKGG + +F + S Y ++ I ++ GFCR +T +
Sbjct: 57 GSDPITSLHHTPDRLVTQEKGGTITMFSIGGSSYVKERSIPGNHLGFCRSALHTNTSKTN 116
Query: 465 ---LYVPEKDYKINIYNFNGEKLGS--LXYDDASV-KLGDVMCLKFIE 590
L+ P ++ I + + + L DD + KLG V C K E
Sbjct: 117 EQLLFYPCEESSIGVLHVTDAAAPTQILVPDDPQLPKLGSVTCFKPFE 164
>BT011170-1|AAR84385.1| 897|Drosophila melanogaster AT01547p
protein.
Length = 897
Score = 31.9 bits (69), Expect = 0.71
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +3
Query: 114 ALLPPDPVYTIRNVDNV--------PVYSLAFSFLPGGLERLLAGSKNGYVYAYNLQ 260
A+L P+PV DN+ P+ + A +F P + LL GSKNG V ++LQ
Sbjct: 433 AVLEPNPVLLWSFSDNLNYKLEFEAPIETTALTFCPFNGDILLGGSKNGQVVLWDLQ 489
>AE014296-1292|AAF50537.1| 1132|Drosophila melanogaster CG14838-PA
protein.
Length = 1132
Score = 31.9 bits (69), Expect = 0.71
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +3
Query: 114 ALLPPDPVYTIRNVDNV--------PVYSLAFSFLPGGLERLLAGSKNGYVYAYNLQ 260
A+L P+PV DN+ P+ + A +F P + LL GSKNG V ++LQ
Sbjct: 433 AVLEPNPVLLWSFSDNLNYKLEFEAPIETTALTFCPFNGDILLGGSKNGQVVLWDLQ 489
>AY118386-1|AAM48415.1| 361|Drosophila melanogaster RE31658p
protein.
Length = 361
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 171 YSLAFSFLPGGLERLLAGSKNGYVYAYNLQTNRVQQKIQ 287
Y + +F G + +++GS++ VY +NLQ+ V QK+Q
Sbjct: 287 YCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQ 325
>AL138972-9|CAB72292.1| 361|Drosophila melanogaster EG:BACR25B3.7
protein.
Length = 361
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 171 YSLAFSFLPGGLERLLAGSKNGYVYAYNLQTNRVQQKIQ 287
Y + +F G + +++GS++ VY +NLQ+ V QK+Q
Sbjct: 287 YCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQ 325
>AF233288-1|AAF43418.1| 361|Drosophila melanogaster WDS protein.
Length = 361
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 171 YSLAFSFLPGGLERLLAGSKNGYVYAYNLQTNRVQQKIQ 287
Y + +F G + +++GS++ VY +NLQ+ V QK+Q
Sbjct: 287 YCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQ 325
>AE014298-414|AAF45791.1| 361|Drosophila melanogaster CG17437-PA
protein.
Length = 361
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 171 YSLAFSFLPGGLERLLAGSKNGYVYAYNLQTNRVQQKIQ 287
Y + +F G + +++GS++ VY +NLQ+ V QK+Q
Sbjct: 287 YCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQ 325
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 141 TIRNVDNVPVYSLAFSFLPG 200
TIR VDN PVYS A+ L G
Sbjct: 153 TIRTVDNEPVYSRAYPTLMG 172
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 141 TIRNVDNVPVYSLAFSFLPG 200
TIR VDN PVYS A+ L G
Sbjct: 148 TIRTVDNEPVYSRAYPTLMG 167
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 141 TIRNVDNVPVYSLAFSFLPG 200
TIR VDN PVYS A+ L G
Sbjct: 183 TIRTVDNEPVYSRAYPTLMG 202
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 141 TIRNVDNVPVYSLAFSFLPG 200
TIR VDN PVYS A+ L G
Sbjct: 183 TIRTVDNEPVYSRAYPTLMG 202
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 141 TIRNVDNVPVYSLAFSFLPG 200
TIR VDN PVYS A+ L G
Sbjct: 601 TIRTVDNEPVYSRAYPTLMG 620
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,380,478
Number of Sequences: 53049
Number of extensions: 503212
Number of successful extensions: 1158
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -