Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_H20
(544 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62906 Cluster: 60S ribosomal protein L10a; n=212; Euka... 151 1e-35
UniRef50_UPI0000E49458 Cluster: PREDICTED: similar to Rpl10a-pro... 134 1e-30
UniRef50_A2WX71 Cluster: Putative uncharacterized protein; n=2; ... 124 1e-27
UniRef50_UPI00005A03AD Cluster: PREDICTED: similar to ribosomal ... 122 7e-27
UniRef50_Q9UVJ4 Cluster: 60S ribosomal protein L10a; n=8; Ascomy... 112 6e-24
UniRef50_UPI00005A268C Cluster: PREDICTED: similar to ribosomal ... 93 3e-18
UniRef50_Q22UX9 Cluster: L1P family of ribosomal proteins contai... 92 7e-18
UniRef50_A2F0R8 Cluster: Ribosomal protein L10a; n=4; Trichomona... 90 4e-17
UniRef50_Q018L4 Cluster: RL10A_CHLRE 60S ribosomal protein L10a;... 89 8e-17
UniRef50_A0CRX7 Cluster: Chromosome undetermined scaffold_253, w... 85 8e-16
UniRef50_UPI00005A509E Cluster: PREDICTED: similar to ribosomal ... 79 9e-14
UniRef50_Q76KS4 Cluster: Ribosomal protein L10a; n=2; Giardia in... 73 3e-12
UniRef50_Q3LW91 Cluster: Ribosomal protein 10a; n=1; Bigelowiell... 73 4e-12
UniRef50_O15613 Cluster: 60S ribosomal protein L10a; n=1; Entamo... 72 8e-12
UniRef50_UPI00005A4EEC Cluster: PREDICTED: similar to ribosomal ... 63 5e-09
UniRef50_Q01AT5 Cluster: Chromosome 04 contig 1, DNA sequence; n... 62 1e-08
UniRef50_Q6E4P9 Cluster: 60S ribosomal protein L10a; n=1; Antono... 47 3e-04
UniRef50_Q8SRY5 Cluster: 60S RIBOSOMAL PROTEIN L10A; n=1; Enceph... 42 0.012
UniRef50_A3BCJ7 Cluster: Ribosomal protein L1; n=5; Oryza sativa... 40 0.028
UniRef50_Q971J1 Cluster: 50S ribosomal protein L1P; n=5; Sulfolo... 38 0.20
UniRef50_Q92J89 Cluster: 50S ribosomal protein L1; n=8; Alphapro... 36 0.60
UniRef50_O28782 Cluster: 50S ribosomal protein L1P; n=3; Archaea... 36 0.60
UniRef50_Q9ZE23 Cluster: 50S ribosomal protein L1; n=7; Bacteria... 36 0.80
UniRef50_A2Y3N8 Cluster: DNA primase; n=4; Oryza sativa|Rep: DNA... 35 1.1
UniRef50_UPI0000ECD0EF Cluster: CDNA FLJ31980 fis, clone NT2RP70... 34 1.8
UniRef50_Q8PY52 Cluster: 50S ribosomal protein L1P; n=7; Archaea... 34 2.4
UniRef50_Q9FJ26 Cluster: DNA primase; n=1; Arabidopsis thaliana|... 33 3.2
UniRef50_Q5QZU9 Cluster: Methyl-accepting chemotaxis protein; n=... 33 4.3
UniRef50_Q0AYI8 Cluster: Translation initiation factor IF-2; n=1... 33 4.3
UniRef50_UPI00015BD23B Cluster: UPI00015BD23B related cluster; n... 32 7.4
>UniRef50_P62906 Cluster: 60S ribosomal protein L10a; n=212;
Eukaryota|Rep: 60S ribosomal protein L10a - Homo sapiens
(Human)
Length = 217
Score = 151 bits (366), Expect = 1e-35
Identities = 75/125 (60%), Positives = 83/125 (66%)
Frame = +2
Query: 65 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 244
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 245 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 424
PK VCVLGDQQHCDEAK +++P M SESLIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 425 PRFVG 439
PR +G
Sbjct: 121 PRILG 125
Score = 66.1 bits (154), Expect = 5e-10
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +3
Query: 420 RFPXLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIXFQM 542
+ P +LGPGLNKAGKFP LL+H E+M K+DEVK TI FQM
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQM 159
>UniRef50_UPI0000E49458 Cluster: PREDICTED: similar to Rpl10a-prov
protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Rpl10a-prov
protein, partial - Strongylocentrotus purpuratus
Length = 155
Score = 134 bits (324), Expect = 1e-30
Identities = 59/82 (71%), Positives = 67/82 (81%)
Frame = +2
Query: 74 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 253
KVSRD LYE V V SK+KKR FLET+ELQ+ LKNYDPQKDKRFSGTVKL++IPRPK
Sbjct: 1 KVSRDLLYEAVKEVQNGSKEKKRKFLETIELQVNLKNYDPQKDKRFSGTVKLRHIPRPKF 60
Query: 254 QVCVLGDQQHCDEAKTLNVPCM 319
+C+LGDQQH DEAK +PCM
Sbjct: 61 SMCILGDQQHLDEAKANGIPCM 82
>UniRef50_A2WX71 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 238
Score = 124 bits (299), Expect = 1e-27
Identities = 58/123 (47%), Positives = 78/123 (63%)
Frame = +2
Query: 71 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 250
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 251 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 430
M+VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 62 MKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 431 FVG 439
+G
Sbjct: 122 LLG 124
Score = 42.7 bits (96), Expect = 0.005
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +3
Query: 447 LNKAGKFPGLLSHQESMTQKIDEVKGTIXFQM 542
++K GKFP L++HQES+ K++E K T+ FQ+
Sbjct: 149 VSKRGKFPTLVTHQESLESKVNETKATVKFQL 180
>UniRef50_UPI00005A03AD Cluster: PREDICTED: similar to ribosomal
protein L10a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 303
Score = 122 bits (293), Expect = 7e-27
Identities = 66/140 (47%), Positives = 80/140 (57%)
Frame = +2
Query: 20 LQLPSVVXGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK 199
L+L V+ G ++ + S T VL ++ K+R FLETVELQI LKNYDPQK
Sbjct: 152 LELEGVMLRGVSQSEKDTAKSPATPCRRRYEVLHGNQRKRRKFLETVELQITLKNYDPQK 211
Query: 200 DKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXX 379
DKRFSGTV+LK P PK VCV+GDQQHCDEAK +++P M
Sbjct: 212 DKRFSGTVRLKSTPCPKFSVCVVGDQQHCDEAKAVDIPHMDIEMLKKLNKNKKLVKKLAK 271
Query: 380 XXXXXXXSESLIKQIPRFVG 439
SESLIKQIPR +G
Sbjct: 272 KYDAFLASESLIKQIPRILG 291
>UniRef50_Q9UVJ4 Cluster: 60S ribosomal protein L10a; n=8;
Ascomycota|Rep: 60S ribosomal protein L10a - Candida
albicans (Yeast)
Length = 217
Score = 112 bits (269), Expect = 6e-24
Identities = 59/134 (44%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Frame = +2
Query: 71 SKVSRDTLYECVNAVLQ-SSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 247
SK++ + E V+ +L+ S++ KKRNFLETVELQ+GLKNYDPQ+DKRFSGT+KL +PRP
Sbjct: 2 SKITSSGVREYVHKLLEYSTETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPQVPRP 61
Query: 248 KMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIP 427
M C+ GD D AK+L V M SE LIKQIP
Sbjct: 62 NMTTCIFGDAFDFDRAKSLGVDAMSVDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQIP 121
Query: 428 RFVGSRFEQSW*IP 469
R +G ++ P
Sbjct: 122 RLLGRTLSKAGQFP 135
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +3
Query: 420 RFPXLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIXFQM 542
+ P LLG L+KAG+FP +SH + + K+ +VK TI FQ+
Sbjct: 119 QIPRLLGRTLSKAGQFPTPVSHNDDLYSKVTDVKSTIKFQL 159
>UniRef50_UPI00005A268C Cluster: PREDICTED: similar to ribosomal
protein L10a isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a isoform 4 -
Canis familiaris
Length = 105
Score = 93.5 bits (222), Expect = 3e-18
Identities = 49/90 (54%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = +2
Query: 65 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKL-KYIP 241
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+L + P
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLAPFCP 60
Query: 242 RPKMQVCVLGDQQHCD-----EAKTLNVPC 316
P ++ G + A+ + PC
Sbjct: 61 HPALRALPPGPPVELEAGGHGRARAVQTPC 90
>UniRef50_Q22UX9 Cluster: L1P family of ribosomal proteins
containing protein; n=9; Eukaryota|Rep: L1P family of
ribosomal proteins containing protein - Tetrahymena
thermophila SB210
Length = 215
Score = 92.3 bits (219), Expect = 7e-18
Identities = 45/124 (36%), Positives = 69/124 (55%)
Frame = +2
Query: 71 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 250
SK+S + L + +L S KKR F ETVELQIGL++Y+P KDKRF+G++KL +P P
Sbjct: 2 SKISSEFLKNTITQML--SDRKKREFTETVELQIGLRDYNPDKDKRFTGSIKLPNMPYPN 59
Query: 251 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 430
++ ++G +HC+EAK + C+ SE+L+KQ+P+
Sbjct: 60 KKIAIIGTMRHCEEAKAAGIACIDTEGLKKFNKEPKLIKKWFKPYDTLLCSETLMKQLPK 119
Query: 431 FVGS 442
G+
Sbjct: 120 LCGN 123
Score = 37.1 bits (82), Expect = 0.26
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 420 RFPXLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIXFQM 542
+ P L G L+K GKFP ++ ES+ K+ E++ T+ FQ+
Sbjct: 116 QLPKLCGNVLSKIGKFPISITEGESVVAKVKELQSTVRFQL 156
>UniRef50_A2F0R8 Cluster: Ribosomal protein L10a; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L10a - Trichomonas
vaginalis G3
Length = 215
Score = 89.8 bits (213), Expect = 4e-17
Identities = 38/77 (49%), Positives = 59/77 (76%)
Frame = +2
Query: 83 RDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVC 262
++TL + + VL+ +K KKR FLETV++Q+ LK Y+ KDKRF G++KL +I RP +++
Sbjct: 6 QETLQKAIKDVLEGAKTKKRGFLETVDIQLKLKGYNVSKDKRFVGSIKLPHIIRPNVRIG 65
Query: 263 VLGDQQHCDEAKTLNVP 313
VLG++ HC+EA+ LN+P
Sbjct: 66 VLGNKVHCEEAQKLNIP 82
>UniRef50_Q018L4 Cluster: RL10A_CHLRE 60S ribosomal protein L10a;
n=1; Ostreococcus tauri|Rep: RL10A_CHLRE 60S ribosomal
protein L10a - Ostreococcus tauri
Length = 134
Score = 88.6 bits (210), Expect = 8e-17
Identities = 41/60 (68%), Positives = 49/60 (81%)
Frame = +2
Query: 68 SSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 247
S K++ DTL E V+ +L+ SK+K R F+ETVELQIGLKNYDPQKDKRF+GTV L IPRP
Sbjct: 74 SGKLNTDTLKEGVSFILEKSKEKPRKFVETVELQIGLKNYDPQKDKRFNGTVNLPVIPRP 133
>UniRef50_A0CRX7 Cluster: Chromosome undetermined scaffold_253,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_253,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 85.4 bits (202), Expect = 8e-16
Identities = 47/126 (37%), Positives = 70/126 (55%)
Frame = +2
Query: 71 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 250
SK+ + L + ++ +L ++ KKRNF ET ELQI L++YD QKDKRF G+ +L + P P
Sbjct: 26 SKLQGEQLKKYIHEML--TERKKRNFKETTELQIQLRDYDVQKDKRFQGSTRLLHAPYPN 83
Query: 251 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 430
+++ V+G+ HCD+AK L + + SESL+K IPR
Sbjct: 84 IKIGVIGNLTHCDQAKALGLTAIDQDGLKKFNKEKKPIKKWCKPFDILIASESLMKVIPR 143
Query: 431 FVGSRF 448
VG+ F
Sbjct: 144 LVGNVF 149
Score = 38.3 bits (85), Expect = 0.11
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 426 PXLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIXFQM 542
P L+G K GKFP + ES++ K++EVK ++ FQ+
Sbjct: 142 PRLVGNVFTKIGKFPIAIPETESVSSKVNEVKSSVKFQL 180
>UniRef50_UPI00005A509E Cluster: PREDICTED: similar to ribosomal
protein L10a; n=2; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 268
Score = 78.6 bits (185), Expect = 9e-14
Identities = 34/54 (62%), Positives = 42/54 (77%)
Frame = +2
Query: 158 VELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 319
V LQI L+N D Q D+RFSGT++LK+ PR K +CVLGDQQHCDEAK + +P M
Sbjct: 13 VLLQISLQNSDSQTDRRFSGTIRLKFTPRLKFSICVLGDQQHCDEAKAVVIPRM 66
Score = 41.9 bits (94), Expect = 0.009
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +3
Query: 432 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIXFQM 542
+LGP LNKAGKFP +H +++ K+D+VK I Q+
Sbjct: 101 ILGPDLNKAGKFPSSKTHVKNIVAKMDDVKFMIKLQI 137
>UniRef50_Q76KS4 Cluster: Ribosomal protein L10a; n=2; Giardia
intestinalis|Rep: Ribosomal protein L10a - Giardia
lamblia (Giardia intestinalis)
Length = 221
Score = 73.3 bits (172), Expect = 3e-12
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +2
Query: 74 KVSRDTLYECVNAVLQ-SSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 250
+++ + L + + +++ ++ +K R FLETVELQ+GLK YDP+KD RF+ + L +I +
Sbjct: 7 RINPEALNKHIAEIIERATNEKPRKFLETVELQVGLKGYDPKKDPRFNLPLVLPHIAKQN 66
Query: 251 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 430
+++CV+ D + D AK L + + S+SLI+QI
Sbjct: 67 LKLCVIADARDADRAKKLGLNYVEIEHLQQFNKDAKQIKKFAKSYDVFLASKSLIRQITV 126
Query: 431 FVGSRFEQSW*IPWSSLP 484
+ G F ++ P P
Sbjct: 127 YAGPGFTKAGRTPLPLAP 144
>UniRef50_Q3LW91 Cluster: Ribosomal protein 10a; n=1; Bigelowiella
natans|Rep: Ribosomal protein 10a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 216
Score = 72.9 bits (171), Expect = 4e-12
Identities = 41/115 (35%), Positives = 59/115 (51%)
Frame = +2
Query: 131 DKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNV 310
+KKRNF+E VEL LK+ + +K K+ SG VKL + PR +++C+L DQ+H EAK L +
Sbjct: 22 NKKRNFIEKVELNFSLKSINFKKHKKISGGVKLPFGPRRAVKICMLADQRHITEAKNLGL 81
Query: 311 PCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVGSRFEQSW*IPWS 475
+ SESLIK IPR++G + P+S
Sbjct: 82 YYLDINQIKLLKNKKKVLKKLVKKFEVFIASESLIKIIPRYLGPALAKVGKFPFS 136
>UniRef50_O15613 Cluster: 60S ribosomal protein L10a; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L10a - Entamoeba
histolytica
Length = 165
Score = 72.1 bits (169), Expect = 8e-12
Identities = 44/124 (35%), Positives = 62/124 (50%)
Frame = +2
Query: 68 SSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 247
SS VSR + V +L+ K++K F ET EL + LKNYDP KDKR GT KL + +
Sbjct: 1 SSAVSR----QGVATILKEKKERK--FGETGELHLALKNYDPDKDKRCGGTDKLPNVTKA 54
Query: 248 KMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIP 427
+VCVLGD Q C+ A+ N+P M S+S+ +Q+
Sbjct: 55 NYKVCVLGDAQACEAAQKENIPHMDVDALKALYKDKMFFKKLARKYNTFLGSDSVGRQLQ 114
Query: 428 RFVG 439
+ +G
Sbjct: 115 KILG 118
Score = 38.7 bits (86), Expect = 0.086
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 432 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIXFQM 542
+LGPGLNK GKFP L E + KI+E++ + Q+
Sbjct: 116 ILGPGLNKGGKFPPPLGKNEDLKVKINELQCQVNSQL 152
>UniRef50_UPI00005A4EEC Cluster: PREDICTED: similar to ribosomal
protein L10a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 205
Score = 62.9 bits (146), Expect = 5e-09
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +3
Query: 426 PXLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIXFQM 542
P +L PGLNKAGKFP LL+H E+M K+DEVK TI FQM
Sbjct: 110 PQILDPGLNKAGKFPSLLTHSENMVAKVDEVKSTIKFQM 148
Score = 53.2 bits (122), Expect = 4e-06
Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 65 MSSKVSRDTLYEC-VNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIP 241
M +K S +C V VLQ ++ K LE VELQI LK YD KD+ F GT++LK P
Sbjct: 25 MGAKKSLRQQCDCGVREVLQGNQPKNWQCLERVELQISLKKYDAVKDRHFLGTIRLKSTP 84
Query: 242 RP 247
P
Sbjct: 85 SP 86
>UniRef50_Q01AT5 Cluster: Chromosome 04 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 04 contig 1, DNA
sequence - Ostreococcus tauri
Length = 175
Score = 61.7 bits (143), Expect = 1e-08
Identities = 36/84 (42%), Positives = 39/84 (46%)
Frame = -2
Query: 438 PTXRGICLISDSDARKXXXXXXXXXXXXXXXXXXXXXXXSIHGTFKVLASSQCCWSPRTQ 259
P RGICLI+DSDARK S+ ASSQC SP
Sbjct: 92 PKRRGICLITDSDARKCWYFFASFLMSFLFLLSFLSASTSMESMPLPAASSQCLASPSMH 151
Query: 258 TCIFGRGMYFSFTVPEKRLSFCGS 187
FGRG+ TVP KRLSFCGS
Sbjct: 152 ILSFGRGITGRLTVPLKRLSFCGS 175
Score = 46.0 bits (104), Expect = 6e-04
Identities = 27/70 (38%), Positives = 33/70 (47%)
Frame = -1
Query: 538 WXLMVPLTSSIFCVMDSWWERRPGNLPALFKPGPNKXGNLLDQ*L*CQESIKFFGQFLDK 359
W L+ LTS I DS GNLPALFKPGP + G L ++ FF FL
Sbjct: 59 WNLIWDLTSLILLSRDSLCVASVGNLPALFKPGPKRRGICLITDSDARKCWYFFASFLMS 118
Query: 358 LFVLIQFFQS 329
L+ F +
Sbjct: 119 FLFLLSFLSA 128
>UniRef50_Q6E4P9 Cluster: 60S ribosomal protein L10a; n=1;
Antonospora locustae|Rep: 60S ribosomal protein L10a -
Antonospora locustae (Nosema locustae)
Length = 211
Score = 46.8 bits (106), Expect = 3e-04
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +2
Query: 152 ETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVP 313
ET+E+Q+ LK YD ++DK+F G+V L + R +V V+GD+ + AK +P
Sbjct: 25 ETMEVQVCLKGYDLKRDKKFDGSVVLPFQKRKNERVLVVGDRNLEEMAKEAGLP 78
>UniRef50_Q8SRY5 Cluster: 60S RIBOSOMAL PROTEIN L10A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L10A
- Encephalitozoon cuniculi
Length = 219
Score = 41.5 bits (93), Expect = 0.012
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = +2
Query: 116 LQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEA 295
L+ S+D ++ + T+++Q+ LK +DP+KD + S + L Y R + V+ D+ H
Sbjct: 25 LKESEDPEK--IVTIQIQVNLKGFDPRKDNKVSKDMVLPYRVRSLDKTIVIADEAHVKVC 82
Query: 296 KTLNVP 313
N+P
Sbjct: 83 IDANLP 88
>UniRef50_A3BCJ7 Cluster: Ribosomal protein L1; n=5; Oryza
sativa|Rep: Ribosomal protein L1 - Oryza sativa subsp.
japonica (Rice)
Length = 392
Score = 40.3 bits (90), Expect = 0.028
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 62 KMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYI 238
K KV+ D L + + + S+ +KKRNF ETVE + L DP++ D+ G + L +
Sbjct: 177 KRPQKVAID-LVDAIREIKTSANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHG 234
Query: 239 PRPKMQVCVLGDQQHCDEAK 298
++V V + DEA+
Sbjct: 235 TGKTVRVAVFAEGPAADEAR 254
>UniRef50_Q971J1 Cluster: 50S ribosomal protein L1P; n=5;
Sulfolobaceae|Rep: 50S ribosomal protein L1P -
Sulfolobus tokodaii
Length = 222
Score = 37.5 bits (83), Expect = 0.20
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 80 SRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQ 256
S+D+L E + L + KRNF ++VEL + K D +K + + V L P +
Sbjct: 7 SKDSLVEALKVALNPENNPKRNFTQSVELIVTFKGIDMKKGELKLREIVPLPKEPSKPRK 66
Query: 257 VCVLGDQQHCDEAK 298
V V+ Q + AK
Sbjct: 67 VLVIPAFQQIESAK 80
>UniRef50_Q92J89 Cluster: 50S ribosomal protein L1; n=8;
Alphaproteobacteria|Rep: 50S ribosomal protein L1 -
Rickettsia conorii
Length = 239
Score = 35.9 bits (79), Expect = 0.60
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = +2
Query: 38 VXGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSG 217
+ GG + KV DTLY NAV + F T+E+ + L D+ G
Sbjct: 11 ISGGKKIREAREKVKSDTLYNLTNAVERLKSASYVKFDPTLEIVMKLGIDSRHSDQMVRG 70
Query: 218 TVKLKYIPRPKMQVCVLGDQQHCDEAKT 301
V L ++V V+ ++ +EAK+
Sbjct: 71 VVNLPAGTGKTVRVAVICKEEREEEAKS 98
>UniRef50_O28782 Cluster: 50S ribosomal protein L1P; n=3;
Archaea|Rep: 50S ribosomal protein L1P - Archaeoglobus
fulgidus
Length = 215
Score = 35.9 bits (79), Expect = 0.60
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +2
Query: 77 VSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKY-IPRP- 247
V +D L + + +++ K KR F+ETVE+ + L+N D +K + R V L + + +P
Sbjct: 3 VDKDKLVKSIEEAIKNGK--KRRFVETVEMAVNLRNVDMKKPENRIDTVVNLPHGLGKPR 60
Query: 248 KMQVCVLGD 274
K+ V GD
Sbjct: 61 KIGVFAKGD 69
>UniRef50_Q9ZE23 Cluster: 50S ribosomal protein L1; n=7;
Bacteria|Rep: 50S ribosomal protein L1 - Rickettsia
prowazekii
Length = 238
Score = 35.5 bits (78), Expect = 0.80
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 38 VXGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQ-KDKRFS 214
+ G + KV DTLY NAV Q F T+E+ + L DP+ D+
Sbjct: 10 ISGSKKIREAREKVKSDTLYNLTNAVAQLKSASYVKFDPTLEIVMKL-GIDPRHSDQIVR 68
Query: 215 GTVKLKYIPRPKMQVCVLGDQQHCDEAKT 301
G V L ++V V+ ++ +EAK+
Sbjct: 69 GVVNLPAGTGKTIRVAVICKEEREEEAKS 97
>UniRef50_A2Y3N8 Cluster: DNA primase; n=4; Oryza sativa|Rep: DNA
primase - Oryza sativa subsp. indica (Rice)
Length = 397
Score = 35.1 bits (77), Expect = 1.1
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 47 GSLTNKMSSKVSRDTLYECVNAVLQSSKDKK-RNFLETVELQIGLKNYDPQKDKRFSGTV 223
G+ + +S + T +E + + LQS K K R +E + D + K + +
Sbjct: 242 GNRRSSISKEDVNATRWEQLKSTLQSGKHKGLRRCIEEIVFSYTYPRLDMEVSKHMNHLL 301
Query: 224 KLKYIPRPKM-QVCVLGDQQHCDEAKTLNVPCM 319
K + PK +VCV D +CD+ VP +
Sbjct: 302 KAPFCIHPKTGRVCVPIDPNNCDDFDPTTVPTL 334
>UniRef50_UPI0000ECD0EF Cluster: CDNA FLJ31980 fis, clone
NT2RP7008487, weakly similar to TRICHOHYALIN.; n=3;
Amniota|Rep: CDNA FLJ31980 fis, clone NT2RP7008487,
weakly similar to TRICHOHYALIN. - Gallus gallus
Length = 955
Score = 34.3 bits (75), Expect = 1.8
Identities = 23/99 (23%), Positives = 47/99 (47%)
Frame = +2
Query: 23 QLPSVVXGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKD 202
QL +V SL K++ ++ + +Q KDK+ L+ +ELQ+ + + Q++
Sbjct: 322 QLAILVERDSLNQKLNERIFEKKQQQETLIYMQGEKDKELRNLKKMELQMKMIHESLQQE 381
Query: 203 KRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 319
K T+KL+ PK+ +L ++ + + C+
Sbjct: 382 KSQHKTLKLEAEAIPKINGVLLERRRELQKEIEMKKRCL 420
>UniRef50_Q8PY52 Cluster: 50S ribosomal protein L1P; n=7;
Archaea|Rep: 50S ribosomal protein L1P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 213
Score = 33.9 bits (74), Expect = 2.4
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 89 TLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK 205
T+ E V V++ S KRNF E+V+L I LKN D + K
Sbjct: 5 TILEAVKKVIEESP--KRNFSESVDLAINLKNLDMNQPK 41
>UniRef50_Q9FJ26 Cluster: DNA primase; n=1; Arabidopsis
thaliana|Rep: DNA primase - Arabidopsis thaliana
(Mouse-ear cress)
Length = 407
Score = 33.5 bits (73), Expect = 3.2
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = +2
Query: 50 SLTNKMSSKVSRDTLYECVNAVLQSSKDKK---RNFLETVELQIGLKNYDPQKDKRFSGT 220
S + +S + + +E + LQS ++K R +E + D + K+ +
Sbjct: 275 SARSSLSEEATSLLRWEQLKKALQSKRNKALSLRTCVEEIVFTFTYPRIDLEVSKQMNHL 334
Query: 221 VKLKYIPRPKM-QVCVLGDQQHCDEAKTLNVPCM 319
+K + PK +VCV D +CDE L VP +
Sbjct: 335 LKAPFCVHPKTGRVCVPIDPNNCDEFDPLAVPTL 368
>UniRef50_Q5QZU9 Cluster: Methyl-accepting chemotaxis protein; n=1;
Idiomarina loihiensis|Rep: Methyl-accepting chemotaxis
protein - Idiomarina loihiensis
Length = 663
Score = 33.1 bits (72), Expect = 4.3
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = -1
Query: 220 SAGETLVLLWVIVLQTNLKLYSLQKVTFLVLRGLKNGIHALVERV 86
+A ETL LW++V+ + + ++ +TF +L+G+ + + L+E +
Sbjct: 301 TASETLSQLWLLVILISAFILAIVVLTFFILKGIYSQVRELLEGI 345
>UniRef50_Q0AYI8 Cluster: Translation initiation factor IF-2; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
Translation initiation factor IF-2 - Syntrophomonas
wolfei subsp. wolfei (strain Goettingen)
Length = 882
Score = 33.1 bits (72), Expect = 4.3
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 32 SVVXGGSLTNKMSSKVSRD--TLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK 205
S V G + S +V RD +YE + L+ KD + +E E IG+K+++ K+
Sbjct: 808 SYVIDGKIQRNASVRVLRDGVIVYEGQLSSLKRFKDDAKEVVENYECGIGIKDFNDVKEG 867
Query: 206 RFSGTVKLKYIPR 244
L+ IPR
Sbjct: 868 DIIEAYTLEEIPR 880
>UniRef50_UPI00015BD23B Cluster: UPI00015BD23B related cluster; n=1;
unknown|Rep: UPI00015BD23B UniRef100 entry - unknown
Length = 366
Score = 32.3 bits (70), Expect = 7.4
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +2
Query: 5 GRPMLLQLPSVVXGGSLTNKMS--SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGL 178
G+P + +P + SL K S ++D LY+ A+ Q S ++ + I
Sbjct: 156 GKPAVPPVPHIGKSLSLAQKQSVMESFTKDALYQIAYAIEQVSSIGYPAYISNITYSIKD 215
Query: 179 KNYDPQKDKRFSGTVKLKY 235
+ P KD++ SG + + +
Sbjct: 216 EKAAPGKDEKLSGVLNITF 234
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,112,857
Number of Sequences: 1657284
Number of extensions: 9663723
Number of successful extensions: 24044
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24036
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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