Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_H19
         (573 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.3  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 448 HLQCGQSSYLNEQEPEVQTEHQDQ 377
           HL  G+ S    Q+ ++Q  HQ Q
Sbjct: 611 HLMAGKESISQHQQSQLQHSHQAQ 634


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 108  PEGHLDXRFSNFVFD 64
            P+GHLD RF+   +D
Sbjct: 2622 PDGHLDYRFTGQEWD 2636


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 108  PEGHLDXRFSNFVFD 64
            P+GHLD RF+   +D
Sbjct: 2623 PDGHLDYRFTGQEWD 2637


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,364
Number of Sequences: 2352
Number of extensions: 11473
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)