Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_H18
(513 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 206 1e-54
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 135 4e-33
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 106 2e-24
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 106 2e-24
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 96 2e-21
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 94 1e-20
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 85 8e-18
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 83 3e-17
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 82 5e-17
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 81 1e-16
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 78 9e-16
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 76 4e-15
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 74 1e-14
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 73 3e-14
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 71 1e-13
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 67 2e-12
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 66 2e-12
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 53 2e-08
SPAC637.08 |||iron-sulfur cluster assembly ATPase Nbp35|Schizosa... 29 0.54
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 26 2.9
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 26 2.9
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 26 2.9
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 3.8
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 25 6.7
SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces pombe... 25 6.7
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 25 6.7
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 206 bits (503), Expect = 1e-54
Identities = 90/164 (54%), Positives = 130/164 (79%)
Frame = +2
Query: 17 MRXYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 196
+R YK+VV+G GGVGKSALT+Q +Q FV++YDPTIEDSYRK+ E+DG+ +L++LDTAG
Sbjct: 6 LREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAG 65
Query: 197 TEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDL 376
E+++AMR+ YM+ G+GF+LVY+IT++S+F+++ +QILRVKD P+VLV NK DL
Sbjct: 66 QEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDL 125
Query: 377 XAERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLXRQI 508
AERVV + +G+ LA+ +C ++ETSAK +++V + FY L R I
Sbjct: 126 EAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 135 bits (326), Expect = 4e-33
Identities = 67/153 (43%), Positives = 103/153 (67%)
Frame = +2
Query: 29 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 208
+I VLGS VGKS+LTVQ+V+ FVE Y PTIE+++ K ++ GQ+ EI+DTAG +++
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEY 67
Query: 209 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLXAER 388
+ + + G+VLVYSIT++S+F ++ +R++IL T VP+V+VGNK+DL +R
Sbjct: 68 SILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQR 127
Query: 389 VVGKEQGQNLARHFNCAFMETSAKAKIHVNDVF 487
V E+G+ LA + CA+ E SA+ +V F
Sbjct: 128 AVTAEEGKALANEWKCAWTEASARHNENVARAF 160
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 106 bits (255), Expect = 2e-24
Identities = 55/162 (33%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Frame = +2
Query: 26 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTE 202
+K++++G GVGKS L ++F + E Y TI ++ + E++G+ L+I DTAG E
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 203 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLXA 382
+F + Y + G ++VY +T Q +FN+++ ++I R V +LVGNK+D+
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYA-VEGVNRLLVGNKSDMVD 127
Query: 383 ERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLXRQI 508
++VV + A N F+ETSAK +V F + RQI
Sbjct: 128 KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 106 bits (254), Expect = 2e-24
Identities = 53/161 (32%), Positives = 95/161 (59%), Gaps = 1/161 (0%)
Frame = +2
Query: 29 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQ 205
K++++G GVGKS L ++F + F + TI ++ + +E+DG++ L+I DTAG E+
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 206 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLXAE 385
F + Y + G +L+Y +T + +F++++ + + + +V +L+GNK D +
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQ-HASENVYKILIGNKCDCEDQ 129
Query: 386 RVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLXRQI 508
R V EQGQ LA F+E SAK ++V++ F+ L R+I
Sbjct: 130 RQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 96.3 bits (229), Expect = 2e-21
Identities = 56/165 (33%), Positives = 94/165 (56%), Gaps = 1/165 (0%)
Frame = +2
Query: 17 MRXYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDGQQCMLEILDTA 193
+R +K+V LG VGK++L +F+ F Y TI D K + ++ + L++ DTA
Sbjct: 9 LRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 194 GTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTD 373
G E+F ++ Y+++ ++VY IT ++F + + E + R + DV +VLVGNKTD
Sbjct: 69 GQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDV-RAERGDDVIIVLVGNKTD 127
Query: 374 LXAERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLXRQI 508
L +R V +E+G+ A+ METSAKA +V +F + + +
Sbjct: 128 LADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQML 172
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 94.3 bits (224), Expect = 1e-20
Identities = 54/162 (33%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
Frame = +2
Query: 26 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTE 202
+K V++G GVGKS L ++F + F + TI + + + +D ++ +I DTAG E
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 203 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLXA 382
++ A+ Y + G ++VY IT QS+F+++ ++ LR +++ ++LVGNKTDL
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKE-LREHADSNIVIMLVGNKTDLLH 129
Query: 383 ERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLXRQI 508
R V E+ Q A N +F+ETSA +V + F + +I
Sbjct: 130 LRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEI 171
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 84.6 bits (200), Expect = 8e-18
Identities = 52/163 (31%), Positives = 90/163 (55%), Gaps = 3/163 (1%)
Frame = +2
Query: 29 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDGQQCM-LEILDTAGTE 202
K+V+LG VGKS+L ++FV+ F + + TI ++ Q + +D + LEI DTAG E
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 203 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLXA 382
++ ++ +Y +N ++VY IT ++ + +++ R + + + L GNK DL
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQR-QAPEGIVIALAGNKLDLAQ 134
Query: 383 E-RVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLXRQI 508
E R V K + A N F ETSAK +VN++F + +++
Sbjct: 135 ERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 82.6 bits (195), Expect = 3e-17
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 7/165 (4%)
Frame = +2
Query: 29 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQ 205
K+V+LG GVGK+ L QFV F +Y TI D K V VD + L++ DTAG E+
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 206 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQIL--RVKDTTDVPMVLVGNKTDLX 379
F ++ + + V+VY++ +F+ +++ R++ L +D P ++VGN+ D
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 380 A-ERVVGKEQGQNL--ARH-FNCAFMETSAKAKIHVNDVFYDLXR 502
A +R V + + ++H N E SAK +V D+F + R
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 81.8 bits (193), Expect = 5e-17
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Frame = +2
Query: 29 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQ 205
K+++LG GVGK+++ Q+V F + Y TI D K+V VD + L++ DTAG E+
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 206 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQIL---RVKDTTDVPMVLVGNKTDL 376
F ++ + + VLVY + +F L R++ L + P +L+GNK D+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 377 XAE-RVVGKEQGQNLAR-HFNCAFMETSAKAKIHVNDVF 487
+ R+V K + + + ETSAK I+V + F
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAF 168
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 80.6 bits (190), Expect = 1e-16
Identities = 51/167 (30%), Positives = 91/167 (54%), Gaps = 14/167 (8%)
Frame = +2
Query: 29 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 208
K+V++G G GK+ L + F +G F E Y PT+ ++Y VEVDG+ L + DTAG E +
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDY 67
Query: 209 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQD-LREQILRVKDTTDVPMVLVGNKTDL--- 376
+R L + ++ +S+ A + +++Q+ ++L +++P++LVG K DL
Sbjct: 68 DRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHF--CSNLPILLVGCKVDLRND 125
Query: 377 ---------XAERVVGKEQGQNLARHFNC-AFMETSAKAKIHVNDVF 487
+++ + E+GQ +A+ ++E SAK VN+VF
Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVF 172
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 77.8 bits (183), Expect = 9e-16
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 15/168 (8%)
Frame = +2
Query: 29 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEIL--DTAGTE 202
K+VV+G GG GK+ L + F G F E+Y PT+ ++Y + ++E+ DTAG E
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 203 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDL-QDLREQILRVKDTTDVPMVLVGNKTDLX 379
++ +R L N +L +SI ++ N++ + ++ T P+VLVG K DL
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRT--PIVLVGLKADLR 133
Query: 380 AER------------VVGKEQGQNLARHFNCAFMETSAKAKIHVNDVF 487
+R V +Q Q++A N ++E SAK VN+VF
Sbjct: 134 KDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVF 181
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 75.8 bits (178), Expect = 4e-15
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Frame = +2
Query: 29 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 208
KIV+LG G GK++L F +G F + Y+PTI ++Y + VDG L + DTAG E++
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74
Query: 209 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRV-KDTTDVPMVLVGNKTDLXA- 382
+R L + ++ +++ ++ + ++ + + + V + V +VLV K DL
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLENV--ITKWLPEVSSNCPGVKLVLVALKCDLRGA 132
Query: 383 -------ERVVGKEQGQNLARHFNCA-FMETSAKAKIHVNDVFYDLXR 502
+++ E+G A+ N ++E SAK VN+ F + R
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 73.7 bits (173), Expect = 1e-14
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Frame = +2
Query: 29 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 208
K+V++G G GK+ L + F +G F E Y PT+ ++Y VEVDG+ L + DTAG E +
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDY 67
Query: 209 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQD-LREQILRVKDTTDVPMVLVGNKTDL--- 376
+R L + ++ +++ + + +++Q+ ++L + +P++LV K DL
Sbjct: 68 DRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHF--CSSLPILLVACKADLRND 125
Query: 377 ---------XAERVVGKEQGQNLARHFNC-AFMETSAKAKIHVNDVFYDLXR 502
+ V E+GQ +A+ ++E SAK V +VF R
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATR 177
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 72.9 bits (171), Expect = 3e-14
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Frame = +2
Query: 26 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDGQQCMLEILDTAGTE 202
+K+V++G GG GK+ + + G F +KY T+ + + + + + DTAG E
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 203 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLXA 382
+ +RD Y GQ ++++ +T++ T+ ++ ++RV + ++P+VL GNK D+
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCE--NIPIVLCGNKVDVKE 127
Query: 383 ERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLXRQI 508
+V K + R N + + SAK+ + F L R++
Sbjct: 128 RKV--KAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 70.5 bits (165), Expect = 1e-13
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Frame = +2
Query: 29 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDG-----QQCMLEILDTA 193
KIV+ G G GKS L +FV+ + ++ T+ + ++ G ++ L+I DTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 194 GTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTD 373
G E+F ++ Y + G VLVY +T + +F +L I + +T + +VL G+K+D
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPST-ICVVLAGSKSD 129
Query: 374 LXAERVVGKEQGQNLA--RHFNCAFMETSAKAKIHVNDVFYDLXRQI 508
L +R V E+ +H + A ETS+ +V + F + I
Sbjct: 130 LQNQRQVSTEEAAEFCSEKHISSAH-ETSSYTGSNVEECFLSVVSTI 175
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 66.9 bits (156), Expect = 2e-12
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Frame = +2
Query: 17 MRXYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 196
M K VV+G G VGK+ L + + F Y PT+ D+Y V + + L + DTAG
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAG 60
Query: 197 TEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDL 376
E + +R L F++ +S+T+ ++F ++++ + VP ++VG + DL
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVH-HHCPGVPCLIVGTQIDL 119
Query: 377 XAERVVGK------------EQGQNLARHFNCA-FMETSAKAKIHVNDVF 487
+ V + EQG+ LAR ++E SA + + +VF
Sbjct: 120 RDDPSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVF 169
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 66.5 bits (155), Expect = 2e-12
Identities = 36/125 (28%), Positives = 65/125 (52%)
Frame = +2
Query: 29 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 208
K+VV+G G GK++L F G F +Y PT+ ++Y VDG+ L + DTAG E++
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEY 69
Query: 209 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLXAER 388
+R + ++ ++I + + ++ + + +VP +LVG K DL ++
Sbjct: 70 ERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTL-CPNVPFILVGMKADLRSDP 128
Query: 389 VVGKE 403
V +E
Sbjct: 129 VAIEE 133
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 53.2 bits (122), Expect = 2e-08
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Frame = +2
Query: 29 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSY-RKQVEVDGQQCMLEILDTAGTEQ 205
K+ ++G +GK++L V +VQG F E+ T+ ++ K + + + I D G +
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 206 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTD 373
F M + + + ++ ++ +ST N +++ Q R + T VP +L+G K D
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQ-ARGFNKTAVP-ILIGTKYD 125
>SPAC637.08 |||iron-sulfur cluster assembly ATPase
Nbp35|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 28.7 bits (61), Expect = 0.54
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 26 YKIVVL-GSGGVGKSALTVQFVQGIFVEK 109
+KI+VL G GGVGKS + Q G+ +E+
Sbjct: 61 HKILVLSGKGGVGKSTFSSQLAWGLSLEE 89
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 26.2 bits (55), Expect = 2.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 32 IVVLGSGGVGKSALTVQFVQGIFVEK 109
+V+ G GGVGKS++T Q + K
Sbjct: 9 LVLSGKGGVGKSSVTTQLALSLHDSK 34
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 26.2 bits (55), Expect = 2.9
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 6 YRE*CAXTK*LC*AAEAWESPP*QCNLYKASLSRN-TTQPSKTATGNK 146
Y E + + +C +AW PP +L + + N T PS + G K
Sbjct: 213 YGEKASDVRYVCLFCKAWNGPPIDKSLPSSEMDSNLQTNPSSISKGKK 260
>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 127
Score = 26.2 bits (55), Expect = 2.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 194 LRYPGSRAYIAVHQLPLVSCSCLRWLGRI 108
+ +P SR H LP++ CS L +G I
Sbjct: 65 MSHPSSRKDTMEHGLPIILCSTLMLVGNI 93
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 466 FRFCRRLHESAVEVARQILS 407
F FC LHE VE A QIL+
Sbjct: 54 FGFCEFLHEQDVEYACQILN 73
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 25.0 bits (52), Expect = 6.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 93 PCTNCTVRADFPTPPLPNTTILYXRIIPYI 4
P +CT++ + T +P T L+ I PY+
Sbjct: 569 PLGSCTMKLNAVTEMMPITNPLFANIHPYV 598
>SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 25.0 bits (52), Expect = 6.7
Identities = 23/84 (27%), Positives = 37/84 (44%)
Frame = +2
Query: 32 IVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 211
++VLG+GGV AL G V T+ S +++E + ++ T Q+
Sbjct: 169 VLVLGTGGVSTFALQFALAAGANV-----TVTSSSDEKLEFAKKLGATHTINYKKTPQW- 222
Query: 212 AMRDLYMKNGQGFVLVYSITAQST 283
A L M NG G+ V + + T
Sbjct: 223 ASPALKMTNGVGYHHVIEVGGEKT 246
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 25.0 bits (52), Expect = 6.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 296 QDLREQILRVKDTTDVPMVLVGNKTDL 376
+D+R+Q++R+ D P+V G K +L
Sbjct: 1022 EDVRKQLIRLMDRYRHPVVSCGRKREL 1048
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,217,444
Number of Sequences: 5004
Number of extensions: 46590
Number of successful extensions: 190
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 206265012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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