Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_H17
(754 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0342 - 20425141-20425311,20425415-20425558,20426506-204266... 82 4e-16
05_05_0237 - 23526613-23527178,23527979-23528066,23528384-235285... 80 2e-15
01_06_1593 + 38502884-38502993,38503580-38503665,38504352-385044... 79 4e-15
07_01_0861 + 7152976-7153061,7153222-7153310,7154862-7155013,715... 78 9e-15
02_05_0567 + 30029862-30030136,30030299-30030384,30031663-300318... 73 3e-13
01_06_1141 + 34845834-34845931,34846110-34846198,34846535-348466... 68 7e-12
03_06_0443 + 33973229-33973311,33973422-33973510,33974873-339750... 66 2e-11
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 56 4e-08
08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,496... 45 6e-05
02_01_0198 + 1334563-1334994,1335872-1335919,1336096-1336351,133... 30 2.3
03_06_0621 - 35147070-35148359,35148499-35148579,35148665-351487... 29 3.0
02_04_0275 - 21469391-21470650 28 9.2
01_01_0956 + 7505206-7505322,7505860-7506723,7506841-7507260,750... 28 9.2
>05_04_0342 -
20425141-20425311,20425415-20425558,20426506-20426622,
20426719-20426835,20427533-20427678,20428208-20428293,
20428780-20428889
Length = 296
Score = 82.2 bits (194), Expect = 4e-16
Identities = 38/92 (41%), Positives = 60/92 (65%)
Frame = +3
Query: 453 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLAD 632
++P +NFVG+LLGP+GN++K+++ T C++ + GRGS++D KE++LR P Y HL D
Sbjct: 150 KYPNYNFVGRLLGPRGNSLKRVEATTQCRVYIRGRGSVKDSVKEDKLRDK--PGYEHLND 207
Query: 633 DLHVEISAIAPPAEAHARIAYALAEVKKYLXP 728
LHV + A P R+ A+A ++ L P
Sbjct: 208 PLHVLVEAEFPSDIVDVRLNQAVAILEDLLKP 239
>05_05_0237 -
23526613-23527178,23527979-23528066,23528384-23528527,
23528674-23528790,23528860-23528970,23530911-23531062,
23531362-23531450,23531664-23531761
Length = 454
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/91 (40%), Positives = 59/91 (64%)
Frame = +3
Query: 456 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADD 635
+P FNF+G+LLGP+GN++K+++ T C++ + G+GS++D KEE+L+ Y HL D
Sbjct: 148 YPNFNFIGRLLGPRGNSLKRIEASTGCRVFIRGKGSIKDPNKEEQLKGRAG--YEHLDDP 205
Query: 636 LHVEISAIAPPAEAHARIAYALAEVKKYLXP 728
LH+ I A P AR+A A +++ L P
Sbjct: 206 LHILIEAELPANVIDARLAKAQEILEELLKP 236
>01_06_1593 +
38502884-38502993,38503580-38503665,38504352-38504497,
38504817-38504933,38505028-38505144,38505858-38506001,
38506099-38506251
Length = 290
Score = 79.0 bits (186), Expect = 4e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Frame = +3
Query: 453 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLAD 632
++P +NFVG+LLGP+GN++K+++ T C++ + GRGS++D KE++LR P Y HL +
Sbjct: 150 KYPNYNFVGRLLGPRGNSLKRVEASTQCRVYIRGRGSVKDSVKEDKLRDK--PGYEHLNE 207
Query: 633 DLHVEISAIAPPAEAHARIAYALAEVKKYLXP 728
LHV + A P R+ A+ ++ L P
Sbjct: 208 PLHVLVEAEFPADIIDTRLNQAVTILEDLLKP 239
>07_01_0861 +
7152976-7153061,7153222-7153310,7154862-7155013,
7155254-7155382,7155465-7155581,7156353-7156496,
7156749-7156851,7157471-7157565,7157953-7158096
Length = 352
Score = 77.8 bits (183), Expect = 9e-15
Identities = 36/91 (39%), Positives = 57/91 (62%)
Frame = +3
Query: 456 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADD 635
+P FNFVG++LGP+GN++K+++ T C++ + G+GS++D KEE+L+ P Y HL D
Sbjct: 150 YPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDADKEEKLKGK--PGYEHLNDP 207
Query: 636 LHVEISAIAPPAEAHARIAYALAEVKKYLXP 728
LH+ I A P R+ A + + L P
Sbjct: 208 LHILIEAELPANIIDTRLRQAQEIMDELLKP 238
>02_05_0567 +
30029862-30030136,30030299-30030384,30031663-30031811,
30032581-30032685,30032779-30032895,30033251-30033394,
30033519-30033668
Length = 341
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/92 (35%), Positives = 57/92 (61%)
Frame = +3
Query: 453 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLAD 632
++P FNFVG++LGP+GN++K+++ T C++ + GRGS++D +E+ +R P Y HL +
Sbjct: 202 KYPTFNFVGRILGPRGNSLKRVEATTDCRVLIRGRGSIKDPAREDMMRGK--PGYEHLNE 259
Query: 633 DLHVEISAIAPPAEAHARIAYALAEVKKYLXP 728
LH+ + A P R+ A ++ L P
Sbjct: 260 PLHILVEAELPVEIIDTRLIQARDILEDLLKP 291
>01_06_1141 +
34845834-34845931,34846110-34846198,34846535-34846686,
34847473-34847583,34847702-34847818,34847989-34848156,
34848563-34848703
Length = 291
Score = 68.1 bits (159), Expect = 7e-12
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 8/99 (8%)
Frame = +3
Query: 456 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD--------RQKEEELRQSLDP 611
+P FNF+G+LLGP+GN++K+++ T C++ + G+GS++D KEE+L+ P
Sbjct: 148 YPHFNFIGRLLGPRGNSLKRVEASTGCRVFIRGKGSIKDPIKASLFVTFKEEQLKGR--P 205
Query: 612 KYSHLADDLHVEISAIAPPAEAHARIAYALAEVKKYLXP 728
Y HL+D H+ I A P R+A A ++ L P
Sbjct: 206 GYEHLSDPTHILIEAELPADVIDTRLAQAQEILEDLLKP 244
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 255 AGEYMRELLSEKIKLNN--SKFPLSMKLIDQEVTKVQA 362
AG+Y+ ELL E+ K+ P+ +L++QE+ ++ A
Sbjct: 32 AGQYLAELLQEQQKIGPFVQVLPICGRLLNQEIMRMSA 69
>03_06_0443 +
33973229-33973311,33973422-33973510,33974873-33975024,
33975463-33975579,33975729-33975776,33976169-33976312,
33976715-33976858
Length = 258
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 16/107 (14%)
Frame = +3
Query: 456 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQK----------------EE 587
H +FNFVG++LGP+GN++K+++ T C++ + G+GS++D K E+
Sbjct: 106 HQEFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKVCKIWVKLLLVALLISED 165
Query: 588 ELRQSLDPKYSHLADDLHVEISAIAPPAEAHARIAYALAEVKKYLXP 728
+LR P Y HL+D LH+ I A P + AR+ +A +++ L P
Sbjct: 166 KLRGK--PGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKP 210
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/92 (31%), Positives = 53/92 (57%)
Frame = +3
Query: 453 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLAD 632
E P +NF+G ++GP+GNT K+++++T K+ + G+GS+++ + ++ DP + +
Sbjct: 105 EFPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGKLLQKRDMKPDPSEN---E 161
Query: 633 DLHVEISAIAPPAEAHARIAYALAEVKKYLXP 728
DLHV + AE + A V+K L P
Sbjct: 162 DLHVLVE-----AETQEALDAAAGMVEKLLTP 188
>08_01_0005 +
47929-48201,48663-48788,49009-49054,49188-49270,
49651-49728,49831-49884,50004-50138,50222-51691
Length = 754
Score = 45.2 bits (102), Expect = 6e-05
Identities = 27/91 (29%), Positives = 48/91 (52%)
Frame = +3
Query: 456 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADD 635
+P N +G L+GP+ N K+LQE+T K+ V G R ++ E+ Q+ + +D
Sbjct: 180 YPGHNIIGVLMGPESNAQKRLQEETGAKIRVY--GIKRTNGEKSEIHQADIGEVQGAYED 237
Query: 636 LHVEISAIAPPAEAHARIAYALAEVKKYLXP 728
L++ +S A+ H ++ A A ++ L P
Sbjct: 238 LYINVS-----ADTHDKVDAATALIELLLTP 263
>02_01_0198 +
1334563-1334994,1335872-1335919,1336096-1336351,
1336733-1336881,1336969-1337097,1337425-1337592,
1338416-1338610
Length = 458
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 474 VGKLLGPKGNTMKQLQEDTLCKMAVL 551
VG L+G +G+T+K+L EDT ++ VL
Sbjct: 108 VGGLIGRRGDTIKRLCEDTRARVRVL 133
>03_06_0621 - 35147070-35148359,35148499-35148579,35148665-35148741,
35148792-35149298,35149405-35150278
Length = 942
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Frame = +3
Query: 480 KLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKY--SHLADDLHVEIS 653
K G K MK+++ A R D Q+ E++ L PKY + L +VE+
Sbjct: 855 KTKGAKRPKMKEVEIRLQLLRAARSRAYKEDLQRSSEIKPLLTPKYKCTSLNSTKNVEMG 914
Query: 654 AIAPPAEAHARIAYALAEVKKY 719
+A P Y + Y
Sbjct: 915 LVANPESQVVSRCYTMEREMMY 936
>02_04_0275 - 21469391-21470650
Length = 419
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/81 (23%), Positives = 37/81 (45%)
Frame = +3
Query: 456 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADD 635
HP++ V +++ + KQ + D CK + +++ + K E+ + Y H D
Sbjct: 90 HPQWQEVAEVVSSRDGYSKQPKSDVQCKNRI---DTLKKKYKVEKAKPDSSWPYFHRLDT 146
Query: 636 LHVEISAIAPPAEAHARIAYA 698
L ++ + PA A+ A A
Sbjct: 147 L---LAPVHKPAGAYPAAAAA 164
>01_01_0956 +
7505206-7505322,7505860-7506723,7506841-7507260,
7508091-7508342,7508696-7508953,7509798-7509877,
7509959-7510070,7510492-7510541,7511070-7511171,
7511215-7511276,7511888-7511928
Length = 785
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 474 VGKLLGPKGNTMKQLQEDTLCKMAV 548
VG LLG G+ +KQ+ D+ C++ V
Sbjct: 286 VGWLLGKNGSVIKQMSTDSCCEIRV 310
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,961,474
Number of Sequences: 37544
Number of extensions: 303055
Number of successful extensions: 761
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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