Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_H12
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   3.2  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   5.7  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   7.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   9.9  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 374 AAGQVTTCCTSKLRTWRSFGRTSR 445
           AAG V     S+LR W+ F   +R
Sbjct: 445 AAGVVAPLLASRLREWKPFSEPTR 468


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 241 GALRIYHREFGR 206
           G+ R+YHR FGR
Sbjct: 226 GSFRVYHRCFGR 237


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 157 FALFARLTHLDXQPXQALLHD 95
           F L    THL  +  QALLH+
Sbjct: 47  FVLSDEFTHLRPEQRQALLHE 67


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 18/53 (33%), Positives = 20/53 (37%)
 Frame = +3

Query: 393  PAVRPSSEHGGPLAGLLAQTRRPSTHTAQHVYEPVPRSQEKNRETWSQTRGLR 551
            P  RPS    GP   + A TRR   H  Q       RS  K    W +  G R
Sbjct: 1143 PTFRPSGPAMGPRTAMAAGTRR--AHVLQ-------RSAGKMFHQWGEALGAR 1186


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 387  SRPAVRPSSEHGGPLAGLLAQTRRPSTHTAQHVYEPVPRSQ 509
            S+ +   SS HGGP   +++ T  PS  +A     P    Q
Sbjct: 1339 SQSSHHSSSSHGGPTPSIISHT--PSLSSASGSIGPKSADQ 1377


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,204
Number of Sequences: 2352
Number of extensions: 12155
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)