Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_H12
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 120 8e-28
Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical pr... 34 0.088
Z22178-7|CAA80157.2| 288|Caenorhabditis elegans Hypothetical pr... 34 0.088
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 32 0.27
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical pr... 30 1.4
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 30 1.4
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf (tbp-asso... 29 3.3
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 28 4.4
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 28 4.4
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 7.7
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 7.7
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 7.7
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 120 bits (289), Expect = 8e-28
Identities = 55/152 (36%), Positives = 89/152 (58%)
Frame = +1
Query: 136 LIAQTVQKHAGRAKEKLLQXLGKVDRTLDDIFEXHLQNFNRQHQQSTRLQKEFNNYIRCI 315
L + ++K R KEKLL+ +GK T D++F+ H N N+Q + +L K+ NY +
Sbjct: 4 LFNKHLKKATNRTKEKLLEGIGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSAL 63
Query: 316 RAAQTASKSLMEAITEVYESGWSGHDLLYVQAQNMEVLWQDFSHKLGDQVLIPLNTYTNQ 495
R +A K L + I + YE W + L N+++ + + D + + Y NQ
Sbjct: 64 RTLLSAEKQLRDTIRDAYEPEWPDREHLTAIFDNLDIQTNELEKTVCDDLPQTVTQYVNQ 123
Query: 496 FPEVRKKIEKRGRKLVDYDSQRHSFXNLQANA 591
FP+++KKIEKRGRKLVDYDS ++SF +++A++
Sbjct: 124 FPDLKKKIEKRGRKLVDYDSAKNSFNSVKASS 155
>Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical
protein F54C8.7b protein.
Length = 307
Score = 33.9 bits (74), Expect = 0.088
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +1
Query: 172 AKEKLLQXLGKVDRTLDDIFEXHLQNFNRQHQQSTRLQKEFNNYIRCIRAAQTASKSLME 351
+K++LL+ +GK+D+T+D FE + H++ + N+ + A K L E
Sbjct: 77 SKQQLLEHMGKIDKTVDPEFEAQCEVLKDIHRRYGLVVAAAKNFSHVLTQMAEAEKKLSE 136
Query: 352 AITEV 366
+ ++
Sbjct: 137 SFYQL 141
>Z22178-7|CAA80157.2| 288|Caenorhabditis elegans Hypothetical
protein F54C8.7a protein.
Length = 288
Score = 33.9 bits (74), Expect = 0.088
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +1
Query: 172 AKEKLLQXLGKVDRTLDDIFEXHLQNFNRQHQQSTRLQKEFNNYIRCIRAAQTASKSLME 351
+K++LL+ +GK+D+T+D FE + H++ + N+ + A K L E
Sbjct: 58 SKQQLLEHMGKIDKTVDPEFEAQCEVLKDIHRRYGLVVAAAKNFSHVLTQMAEAEKKLSE 117
Query: 352 AITEV 366
+ ++
Sbjct: 118 SFYQL 122
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 32.3 bits (70), Expect = 0.27
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +1
Query: 172 AKEKLLQXLGKVDRTLDDIFEXHLQNFNRQHQQSTRLQKEFNNYIRCIRAAQTASKSLME 351
AKE++LQ K+ + L+D L+N H+ S + QK+F + + R A K+L++
Sbjct: 1411 AKERILQSKKKIQQELED-SSMELENVRASHRDSEKRQKKFESQMAEERVA--VQKALLD 1467
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.9 bits (64), Expect = 1.4
Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 8/144 (5%)
Frame = +1
Query: 139 IAQTVQKHAGRAKEKLLQXLGKVDRTLDDIFEXHLQNFNRQHQQSTRLQKEFNNYIRCIR 318
+ + V + K+K+ + + ++ +D + N + + +FN+ IR R
Sbjct: 2609 VLERVVEQLTERKDKMAEINSQANKIVDTYTKDEAHNLSHLLSRLNMSWTKFNDNIRIRR 2668
Query: 319 AAQTAS----KSLMEAITEVYESGWSGHD----LLYVQAQNMEVLWQDFSHKLGDQVLIP 474
A AS + A++E +E S + L N + + K Q
Sbjct: 2669 AVLEASLRSRRDFHSALSE-FEKWLSRQEDNCSKLSADTSNHQAIKDTSKRKNWTQSFKT 2727
Query: 475 LNTYTNQFPEVRKKIEKRGRKLVD 546
LN N +V K +EK G+ L +
Sbjct: 2728 LNAELNAHEDVMKSVEKMGKMLAE 2751
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.9 bits (64), Expect = 1.4
Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 8/144 (5%)
Frame = +1
Query: 139 IAQTVQKHAGRAKEKLLQXLGKVDRTLDDIFEXHLQNFNRQHQQSTRLQKEFNNYIRCIR 318
+ + V + K+K+ + + ++ +D + N + + +FN+ IR R
Sbjct: 2609 VLERVVEQLTERKDKMAEINSQANKIVDTYTKDEAHNLSHLLSRLNMSWTKFNDNIRIRR 2668
Query: 319 AAQTAS----KSLMEAITEVYESGWSGHD----LLYVQAQNMEVLWQDFSHKLGDQVLIP 474
A AS + A++E +E S + L N + + K Q
Sbjct: 2669 AVLEASLRSRRDFHSALSE-FEKWLSRQEDNCSKLSADTSNHQAIKDTSKRKNWTQSFKT 2727
Query: 475 LNTYTNQFPEVRKKIEKRGRKLVD 546
LN N +V K +EK G+ L +
Sbjct: 2728 LNAELNAHEDVMKSVEKMGKMLAE 2751
>Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical
protein K02B9.2 protein.
Length = 819
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +3
Query: 240 PTEFQPTAPAVHQVAEGVQQLHKMYTSGADSFEVADGSDHGGLRERLVRSRPAVR-PSSE 416
P P P +A G+ Q+ T+G + + GS + R SRPA + PS +
Sbjct: 540 PAPQLPNLPESFLMAHGLSQIQTSSTAGPSNSSMNHGSGNQQFRMGQSSSRPAPQLPSLQ 599
Query: 417 HGGPLAGLLAQTRRPST 467
+A +AQ ST
Sbjct: 600 ESFLMAHGIAQVETSST 616
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 29.9 bits (64), Expect = 1.4
Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 8/144 (5%)
Frame = +1
Query: 139 IAQTVQKHAGRAKEKLLQXLGKVDRTLDDIFEXHLQNFNRQHQQSTRLQKEFNNYIRCIR 318
+ + V + K+K+ + + ++ +D + N + + +FN+ IR R
Sbjct: 2609 VLERVVEQLTERKDKMAEINSQANKIVDTYTKDEAHNLSHLLSRLNMSWTKFNDNIRIRR 2668
Query: 319 AAQTAS----KSLMEAITEVYESGWSGHD----LLYVQAQNMEVLWQDFSHKLGDQVLIP 474
A AS + A++E +E S + L N + + K Q
Sbjct: 2669 AVLEASLRSXRDFHSALSE-FEKWLSRQEDNCSKLSADTSNHQAIKDTSKRKNWTQSFKT 2727
Query: 475 LNTYTNQFPEVRKKIEKRGRKLVD 546
LN N +V K +EK G+ L +
Sbjct: 2728 LNAELNAHEDVMKSVEKMGKMLAE 2751
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +2
Query: 215 LSMIYSKXTYRISTDSTSSPPGCRRSSTIT 304
+ +IY+ T + T++T+ GC+++STI+
Sbjct: 724 MQLIYTPSTNKTRTETTTDTEGCKKTSTIS 753
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 215 LSMIYSKXTYRISTDSTSSPPGCRRSST 298
+ +IY+ T + T++TS GC+ +ST
Sbjct: 1043 MQLIYNPSTNKTRTETTSDAQGCKATST 1070
>AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 4
protein.
Length = 523
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 360 GGLRERLVRSRPAVRPSSEHGGPLAGLLAQTRRPSTHTAQHVYEPVPRSQ 509
GG V +RP +RP G GL R P H ++ P P Q
Sbjct: 240 GGPHMVSVGARPMIRPMGPGGPSPMGLQGPVRGPMGHQMVQMHPPPPPQQ 289
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Frame = +3
Query: 342 ADGSDHGGLRERLVRSRPAVRPSSEHGGPLA----GLLAQTRRPSTHTAQHVYEPVPRSQ 509
AD +D G + R RP PS++ G PL G AQT T PV + +
Sbjct: 109 ADVNDTGSSPVKKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADTDAIDTASSPVKKGR 168
Query: 510 EKNRETWSQTRG 545
+ + S G
Sbjct: 169 GRPAKNPSADAG 180
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Frame = +3
Query: 342 ADGSDHGGLRERLVRSRPAVRPSSEHGGPLA----GLLAQTRRPSTHTAQHVYEPVPRSQ 509
AD +D G + R RP PS++ G PL G AQT T PV + +
Sbjct: 109 ADVNDTGSSPVKKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADTDAIDTASSPVKKGR 168
Query: 510 EKNRETWSQTRG 545
+ + S G
Sbjct: 169 GRPAKNPSADAG 180
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 390 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 479
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1640 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1667
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 390 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 479
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1931 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1958
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 390 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 479
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1946 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1973
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 390 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 479
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1750 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1777
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 390 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 479
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1640 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1667
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 390 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 479
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1931 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1958
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 390 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 479
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1946 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1973
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 390 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 479
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1750 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1777
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,194,281
Number of Sequences: 27780
Number of extensions: 263881
Number of successful extensions: 907
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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