Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_H09
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    27   0.21 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.0  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 95  LKNHNXTNLIAWXPHRNLSTAEKCST 172
           LK     + + W PH+ L+  ++CST
Sbjct: 337 LKGIERADSVTWNPHKLLTAPQQCST 362


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = +1

Query: 481 FISHHSIP-DYMEFCPN-VNPPCYKSKQEDSVIQEEDVIRLKIVGTRVDASGIFAIGTLI 654
           F  HH I  D  + C   V    Y SK+   +  E +  ++ +VG ++D         ++
Sbjct: 185 FYQHHKIVLDMGKNCVTYVFDLFYLSKRASDLCNEANKTKILLVGLKIDIDQEEERNVVV 244

Query: 655 GDYLGLVPQ*LEIYVTQL 708
              L L+   LEI   +L
Sbjct: 245 TSVLKLMQNKLEITACRL 262


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 152 TAEKCSTTFHW 184
           T+EKC+ TF W
Sbjct: 216 TSEKCNLTFSW 226


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 586 HPLLVLRYPLVYSY 545
           HPL  + +P VYSY
Sbjct: 105 HPLESVPFPQVYSY 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,561
Number of Sequences: 336
Number of extensions: 4089
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)